RNA–Protein interactions for RNA: ENST00000626874.2

CHD2-208, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 7,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-208ENST00000626874 NGLY1Q96IV0 654 aa8.05□□□□□ -1.12
CHD2-208ENST00000626874 EIF5P55010 431 aaKnown RBP8.05□□□□□ -1.12
CHD2-208ENST00000626874 MAP9Q49MG5 647 aa8.05□□□□□ -1.12
CHD2-208ENST00000626874 RAB11FIP3O75154 756 aa8.04□□□□□ -1.12
CHD2-208ENST00000626874 LARP1Q6PKG0 1096 aaKnown RBP8.04□□□□□ -1.12
CHD2-208ENST00000626874 KIAA1328Q86T90 577 aa8.04□□□□□ -1.12
CHD2-208ENST00000626874 SPA17Q15506 151 aa8.04□□□□□ -1.12
CHD2-208ENST00000626874 BLOC1S2Q6QNY1 142 aa8.04□□□□□ -1.12
CHD2-208ENST00000626874 BEGAINQ9BUH8 593 aa8.04□□□□□ -1.12
CHD2-208ENST00000626874 CASTP20810 708 aaKnown RBP8.04□□□□□ -1.12
CHD2-208ENST00000626874 GSE1Q14687 1217 aa8.04□□□□□ -1.12
CHD2-208ENST00000626874 TTF1Q15361 905 aaPredicted RBP8.04□□□□□ -1.12
CHD2-208ENST00000626874 TWISTNBQ3B726 338 aaPredicted RBP8.04□□□□□ -1.12
CHD2-208ENST00000626874 METTL24Q5JXM2 366 aa8.04□□□□□ -1.12
CHD2-208ENST00000626874 KANK4Q5T7N3 995 aaPredicted RBP8.04□□□□□ -1.12
CHD2-208ENST00000626874 PDE4AP27815 886 aa8.04□□□□□ -1.12
CHD2-208ENST00000626874 NOC2LQ9Y3T9 749 aaKnown RBP8.04□□□□□ -1.12
CHD2-208ENST00000626874 KIF2AO00139 706 aaPredicted RBP8.04□□□□□ -1.12
CHD2-208ENST00000626874 CTNNA2P26232 953 aa8.04□□□□□ -1.12
CHD2-208ENST00000626874 ACTN2P35609 894 aa8.04□□□□□ -1.12
CHD2-208ENST00000626874 DDX23Q9BUQ8 820 aaKnown RBP8.04□□□□□ -1.12
CHD2-208ENST00000626874 TSPY26PQ9H489 355 aa8.04□□□□□ -1.12
CHD2-208ENST00000626874 PPP6R1Q9UPN7 881 aa8.04□□□□□ -1.12
CHD2-208ENST00000626874 MRPS9P82933 396 aaKnown RBP8.04□□□□□ -1.12
CHD2-208ENST00000626874 TAX1BP1Q86VP1 789 aa8.04□□□□□ -1.12
CHD2-208ENST00000626874 CDK19Q9BWU1 502 aa8.04□□□□□ -1.12
CHD2-208ENST00000626874 SUPT6HQ7KZ85 1726 aaKnown RBP8.03□□□□□ -1.12
CHD2-208ENST00000626874 LNPKQ9C0E8 428 aa8.03□□□□□ -1.12
CHD2-208ENST00000626874 HAUS2Q9NVX0 235 aa8.03□□□□□ -1.12
CHD2-208ENST00000626874 CCDC83Q8IWF9 413 aa8.03□□□□□ -1.12
CHD2-208ENST00000626874 IFT140Q96RY7 1462 aa8.03□□□□□ -1.12
CHD2-208ENST00000626874 TOM1O60784 492 aa8.03□□□□□ -1.12
CHD2-208ENST00000626874 VIMP08670 466 aaKnown RBP8.03□□□□□ -1.12
CHD2-208ENST00000626874 OGFOD1Q8N543 542 aa8.03□□□□□ -1.12
CHD2-208ENST00000626874 MYCNP04198 464 aaPredicted RBP8.03□□□□□ -1.12
CHD2-208ENST00000626874 CCDC96Q2M329 555 aa8.03□□□□□ -1.12
CHD2-208ENST00000626874 CCDC14Q49A88 953 aa8.03□□□□□ -1.12
CHD2-208ENST00000626874 SPATA24Q86W54 205 aa8.03□□□□□ -1.12
CHD2-208ENST00000626874 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.03□□□□□ -1.12
CHD2-208ENST00000626874 V9GYY5 206 aaPredicted RBP8.03□□□□□ -1.12
CHD2-208ENST00000626874 EFCAB5A4FU69 1503 aa8.03□□□□□ -1.12
CHD2-208ENST00000626874 RGS22Q8NE09 1264 aa8.03□□□□□ -1.12
CHD2-208ENST00000626874 CABP2Q9NPB3 220 aa8.03□□□□□ -1.12
CHD2-208ENST00000626874 PPP1R42Q7Z4L9 355 aa8.03□□□□□ -1.12
CHD2-208ENST00000626874 CFAP57Q96MR6 1250 aa8.03□□□□□ -1.12
CHD2-208ENST00000626874 FMNL2Q96PY5 1086 aa8.03□□□□□ -1.12
CHD2-208ENST00000626874 RFX1P22670 979 aa8.02□□□□□ -1.12
CHD2-208ENST00000626874 FAM114A1Q8IWE2 563 aa8.02□□□□□ -1.12
CHD2-208ENST00000626874 SPATA32Q96LK8 384 aa8.02□□□□□ -1.12
CHD2-208ENST00000626874 TNMDQ9H2S6 317 aa8.02□□□□□ -1.12
CHD2-208ENST00000626874 GNAT3A8MTJ3 354 aa8.02□□□□□ -1.13
CHD2-208ENST00000626874 NASPP49321 788 aaPredicted RBP8.02□□□□□ -1.13
CHD2-208ENST00000626874 PDE4BQ07343 736 aa8.02□□□□□ -1.13
CHD2-208ENST00000626874 DDX46Q7L014 1031 aaKnown RBP8.02□□□□□ -1.13
CHD2-208ENST00000626874 NAPBQ9H115 298 aa8.02□□□□□ -1.13
CHD2-208ENST00000626874 IFIT5Q13325 482 aaKnown RBP8.02□□□□□ -1.13
CHD2-208ENST00000626874 IFI16Q16666 785 aaKnown RBP8.02□□□□□ -1.13
CHD2-208ENST00000626874 FAM43AQ8N2R8 423 aa8.02□□□□□ -1.13
CHD2-208ENST00000626874 CATIPQ7Z7H3 387 aa8.02□□□□□ -1.13
CHD2-208ENST00000626874 ERMNQ8TAM6 284 aa8.02□□□□□ -1.13
CHD2-208ENST00000626874 PRAM1Q96QH2 718 aa8.02□□□□□ -1.13
CHD2-208ENST00000626874 MRC2Q9UBG0 1479 aa8.02□□□□□ -1.13
CHD2-208ENST00000626874 EXOC5O00471 708 aa8.02□□□□□ -1.13
CHD2-208ENST00000626874 ZBTB24O43167 697 aaPredicted RBP8.02□□□□□ -1.13
CHD2-208ENST00000626874 GGNBP2Q9H3C7 697 aa8.02□□□□□ -1.13
CHD2-208ENST00000626874 PRKRIP1Q9H875 184 aaPredicted RBP8.02□□□□□ -1.13
CHD2-208ENST00000626874 FGD5Q6ZNL6 1462 aa8.02□□□□□ -1.13
CHD2-208ENST00000626874 PRC1O43663 620 aa8.02□□□□□ -1.13
CHD2-208ENST00000626874 MYL6BP14649 208 aa8.02□□□□□ -1.13
CHD2-208ENST00000626874 CCDC174Q6PII3 467 aa8.02□□□□□ -1.13
CHD2-208ENST00000626874 BBXQ8WY36 941 aaPredicted RBP8.02□□□□□ -1.13
CHD2-208ENST00000626874 ABCF2Q9UG63 623 aa8.02□□□□□ -1.13
CHD2-208ENST00000626874 LMOD1P29536 600 aaPredicted RBP8.01□□□□□ -1.13
CHD2-208ENST00000626874 FMNL3Q8IVF7 1028 aa8.01□□□□□ -1.13
CHD2-208ENST00000626874 CALML4Q96GE6 196 aa8.01□□□□□ -1.13
CHD2-208ENST00000626874 GSTTP1A0A1W2PQM5 241 aa8.01□□□□□ -1.13
CHD2-208ENST00000626874 PRKAR2BP31323 418 aa8.01□□□□□ -1.13
CHD2-208ENST00000626874 CACNA2D4Q7Z3S7 1137 aa8.01□□□□□ -1.13
CHD2-208ENST00000626874 NAA15Q9BXJ9 866 aaKnown RBP8.01□□□□□ -1.13
CHD2-208ENST00000626874 NEK4P51957 841 aa8.01□□□□□ -1.13
CHD2-208ENST00000626874 MAP2K1Q02750 393 aaPredicted RBP8.01□□□□□ -1.13
CHD2-208ENST00000626874 WDR63Q8IWG1 891 aa8.01□□□□□ -1.13
CHD2-208ENST00000626874 MSANTD4Q8NCY6 345 aa8.01□□□□□ -1.13
CHD2-208ENST00000626874 DYDC1Q8WWB3 177 aa8.01□□□□□ -1.13
CHD2-208ENST00000626874 HOOK2Q96ED9 719 aa8.01□□□□□ -1.13
CHD2-208ENST00000626874 SLC4A2P04920 1241 aa8.01□□□□□ -1.13
CHD2-208ENST00000626874 MRE11P49959 708 aa8.01□□□□□ -1.13
CHD2-208ENST00000626874 PDE3AQ14432 1141 aa8.01□□□□□ -1.13
CHD2-208ENST00000626874 BRDTQ58F21 947 aaPredicted RBP8.01□□□□□ -1.13
CHD2-208ENST00000626874 USO1O60763 962 aaKnown RBP8.01□□□□□ -1.13
CHD2-208ENST00000626874 IBSPP21815 317 aaPredicted RBP8.01□□□□□ -1.13
CHD2-208ENST00000626874 SMC1AQ14683 1233 aaKnown RBP8.01□□□□□ -1.13
CHD2-208ENST00000626874 AACSQ86V21 672 aa8.01□□□□□ -1.13
CHD2-208ENST00000626874 RAB3IL1Q8TBN0 382 aa8.01□□□□□ -1.13
CHD2-208ENST00000626874 TNPO1Q92973 898 aaKnown RBP8.01□□□□□ -1.13
CHD2-208ENST00000626874 CEP63Q96MT8 703 aa8.01□□□□□ -1.13
CHD2-208ENST00000626874 GTPBP4Q9BZE4 634 aaKnown RBP8.01□□□□□ -1.13
CHD2-208ENST00000626874 ERICH3Q5RHP9 1530 aa8.01□□□□□ -1.13
CHD2-208ENST00000626874 POLA1P09884 1462 aaPredicted RBP8.01□□□□□ -1.13
CHD2-208ENST00000626874 CCDC141Q6ZP82 1450 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms