RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 ATP6V1AP38606 617 aa22.28■■□□□ 1.16
UBE3D-208ENST00000626828 PDGFDQ9GZP0 370 aaPredicted RBP22.28■■□□□ 1.16
UBE3D-208ENST00000626828 RBM42Q9BTD8 480 aaKnown RBP22.27■■□□□ 1.16
UBE3D-208ENST00000626828 SCN11AQ9UI33 1791 aa22.27■■□□□ 1.16
UBE3D-208ENST00000626828 IL17REQ8NFR9 667 aa22.26■■□□□ 1.15
UBE3D-208ENST00000626828 PAPPAQ13219 1627 aa22.26■■□□□ 1.15
UBE3D-208ENST00000626828 SLC16A10Q8TF71 515 aa22.25■■□□□ 1.15
UBE3D-208ENST00000626828 MAP3K5Q99683 1374 aa22.25■■□□□ 1.15
UBE3D-208ENST00000626828 FLAD1Q8NFF5 587 aa22.24■■□□□ 1.15
UBE3D-208ENST00000626828 ZBTB7AO95365 584 aa22.23■■□□□ 1.15
UBE3D-208ENST00000626828 TEFQ10587 303 aa22.23■■□□□ 1.15
UBE3D-208ENST00000626828 RTF1Q92541 710 aaKnown RBP22.23■■□□□ 1.15
UBE3D-208ENST00000626828 MTFR1LQ9H019 292 aa22.23■■□□□ 1.15
UBE3D-208ENST00000626828 SRCAPQ6ZRS2 3230 aa22.22■■□□□ 1.15
UBE3D-208ENST00000626828 HTATSF1O43719 755 aaKnown RBP22.22■■□□□ 1.15
UBE3D-208ENST00000626828 PTCD1O75127 700 aaKnown RBP22.22■■□□□ 1.15
UBE3D-208ENST00000626828 ITPK1Q13572 414 aa22.22■■□□□ 1.15
UBE3D-208ENST00000626828 AK7Q96M32 723 aa22.22■■□□□ 1.15
UBE3D-208ENST00000626828 ATF5Q9Y2D1 282 aaPredicted RBP22.22■■□□□ 1.15
UBE3D-208ENST00000626828 PNPLA7Q6ZV29 1317 aa22.22■■□□□ 1.15
UBE3D-208ENST00000626828 SLC4A9Q96Q91 983 aa22.21■■□□□ 1.15
UBE3D-208ENST00000626828 PLEKHF1Q96S99 279 aa22.21■■□□□ 1.15
UBE3D-208ENST00000626828 TAF1LQ8IZX4 1826 aa22.21■■□□□ 1.15
UBE3D-208ENST00000626828 LRP5O75197 1615 aa22.2■■□□□ 1.15
UBE3D-208ENST00000626828 LINC00116Q8NCU8 138 aa22.2■■□□□ 1.14
UBE3D-208ENST00000626828 VIRMAQ69YN4 1812 aaKnown RBP22.2■■□□□ 1.14
UBE3D-208ENST00000626828 MSH5O43196 834 aa22.19■■□□□ 1.14
UBE3D-208ENST00000626828 RC3H1Q5TC82 1133 aaKnown RBP22.19■■□□□ 1.14
UBE3D-208ENST00000626828 COL23A1Q86Y22 540 aaPredicted RBP22.19■■□□□ 1.14
UBE3D-208ENST00000626828 CASZ1Q86V15 1759 aa22.19■■□□□ 1.14
UBE3D-208ENST00000626828 C5P01031 1676 aa22.18■■□□□ 1.14
UBE3D-208ENST00000626828 SLC39A6Q13433 755 aa22.18■■□□□ 1.14
UBE3D-208ENST00000626828 PPP1R1BQ9UD71 204 aaPredicted RBP22.18■■□□□ 1.14
UBE3D-208ENST00000626828 MAPK8IP3Q9UPT6 1336 aa22.17■■□□□ 1.14
UBE3D-208ENST00000626828 WDR43Q15061 677 aaKnown RBP eCLIP22.17■■□□□ 1.14
UBE3D-208ENST00000626828 QSER1Q2KHR3 1735 aa22.17■■□□□ 1.14
UBE3D-208ENST00000626828 ADAMTS7Q9UKP4 1686 aa22.17■■□□□ 1.14
UBE3D-208ENST00000626828 CEMIPQ8WUJ3 1361 aa22.16■■□□□ 1.14
UBE3D-208ENST00000626828 TTC5Q8N0Z6 440 aa22.16■■□□□ 1.14
UBE3D-208ENST00000626828 MRC1P22897 1456 aa22.15■■□□□ 1.14
UBE3D-208ENST00000626828 SSFA2P28290 1259 aa22.15■■□□□ 1.14
UBE3D-208ENST00000626828 PTGER2P43116 358 aa22.15■■□□□ 1.14
UBE3D-208ENST00000626828 NFE2L2Q16236 605 aa22.15■■□□□ 1.14
UBE3D-208ENST00000626828 C4BP0C0L5 1744 aa22.14■■□□□ 1.14
UBE3D-208ENST00000626828 GNPATO15228 680 aa22.14■■□□□ 1.13
UBE3D-208ENST00000626828 ANP32CO43423 234 aa22.14■■□□□ 1.13
UBE3D-208ENST00000626828 MCM10Q7L590 875 aa22.14■■□□□ 1.13
UBE3D-208ENST00000626828 VSIG10Q8N0Z9 540 aa22.14■■□□□ 1.13
UBE3D-208ENST00000626828 ZNF831Q5JPB2 1677 aa22.14■■□□□ 1.13
UBE3D-208ENST00000626828 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.13■■□□□ 1.13
UBE3D-208ENST00000626828 BTBD11A6QL63 1104 aa22.13■■□□□ 1.13
UBE3D-208ENST00000626828 ZNF790Q6PG37 636 aa22.13■■□□□ 1.13
UBE3D-208ENST00000626828 RTCBQ9Y3I0 505 aaKnown RBP22.13■■□□□ 1.13
UBE3D-208ENST00000626828 CNTNAP4Q9C0A0 1308 aa22.12■■□□□ 1.13
UBE3D-208ENST00000626828 RPS6KA4O75676 772 aa22.12■■□□□ 1.13
UBE3D-208ENST00000626828 POLD1P28340 1107 aa22.12■■□□□ 1.13
UBE3D-208ENST00000626828 DCTN1Q14203 1278 aa22.12■■□□□ 1.13
UBE3D-208ENST00000626828 TRAPPC3LQ5T215 181 aa22.12■■□□□ 1.13
UBE3D-208ENST00000626828 SGIP1Q9BQI5 828 aa22.12■■□□□ 1.13
UBE3D-208ENST00000626828 ADAMTS8Q9UP79 889 aa22.12■■□□□ 1.13
UBE3D-208ENST00000626828 TUBGCP6Q96RT7 1819 aa22.11■■□□□ 1.13
UBE3D-208ENST00000626828 PHF14O94880 888 aa22.11■■□□□ 1.13
UBE3D-208ENST00000626828 TAF7Q15545 349 aaPredicted RBP22.11■■□□□ 1.13
UBE3D-208ENST00000626828 DNAJC10Q8IXB1 793 aa22.1■■□□□ 1.13
UBE3D-208ENST00000626828 TEX13AQ9BXU3 409 aaPredicted RBP22.1■■□□□ 1.13
UBE3D-208ENST00000626828 ADRA2BP18089 450 aa22.09■■□□□ 1.13
UBE3D-208ENST00000626828 CRKLP46109 303 aaKnown RBP22.09■■□□□ 1.13
UBE3D-208ENST00000626828 RIPK4P57078 832 aa22.09■■□□□ 1.13
UBE3D-208ENST00000626828 SMIM5Q71RC9 77 aa22.09■■□□□ 1.13
UBE3D-208ENST00000626828 AMIGO3Q86WK7 504 aa22.09■■□□□ 1.13
UBE3D-208ENST00000626828 RUNDC1Q96C34 613 aa22.09■■□□□ 1.13
UBE3D-208ENST00000626828 ARXQ96QS3 562 aa22.09■■□□□ 1.13
UBE3D-208ENST00000626828 ZNF496Q96IT1 587 aaPredicted RBP22.08■■□□□ 1.13
UBE3D-208ENST00000626828 FMNL2Q96PY5 1086 aa22.08■■□□□ 1.13
UBE3D-208ENST00000626828 UBR3Q6ZT12 1888 aa22.08■■□□□ 1.13
UBE3D-208ENST00000626828 MYH14Q7Z406 1995 aaKnown RBP22.07■■□□□ 1.12
UBE3D-208ENST00000626828 CYP19A1P11511 503 aaPredicted RBP22.07■■□□□ 1.12
UBE3D-208ENST00000626828 TMPOP42166 694 aaKnown RBP22.07■■□□□ 1.12
UBE3D-208ENST00000626828 STARD3NLO95772 234 aa22.06■■□□□ 1.12
UBE3D-208ENST00000626828 INTS5Q6P9B9 1019 aaKnown RBP22.06■■□□□ 1.12
UBE3D-208ENST00000626828 CCDC146Q8IYE0 955 aa22.06■■□□□ 1.12
UBE3D-208ENST00000626828 PNISRQ8TF01 805 aaKnown RBP22.06■■□□□ 1.12
UBE3D-208ENST00000626828 ARHGEF1Q92888 912 aaKnown RBP22.06■■□□□ 1.12
UBE3D-208ENST00000626828 CCDC87Q9NVE4 849 aa22.06■■□□□ 1.12
UBE3D-208ENST00000626828 DLG5Q8TDM6 1919 aa22.06■■□□□ 1.12
UBE3D-208ENST00000626828 SIPA1L3O60292 1781 aaPredicted RBP22.05■■□□□ 1.12
UBE3D-208ENST00000626828 KCNQ3O43525 872 aa22.05■■□□□ 1.12
UBE3D-208ENST00000626828 RFC4P35249 363 aa22.05■■□□□ 1.12
UBE3D-208ENST00000626828 LMOD3Q0VAK6 560 aa22.05■■□□□ 1.12
UBE3D-208ENST00000626828 HEG1Q9ULI3 1381 aa22.04■■□□□ 1.12
UBE3D-208ENST00000626828 KCPQ6ZWJ8 1503 aa22.04■■□□□ 1.12
UBE3D-208ENST00000626828 COL5A3P25940 1745 aaPredicted RBP22.03■■□□□ 1.12
UBE3D-208ENST00000626828 MSL1Q68DK7 614 aa22.03■■□□□ 1.12
UBE3D-208ENST00000626828 NEUROD2Q15784 382 aa22.02■■□□□ 1.12
UBE3D-208ENST00000626828 NLGN1Q8N2Q7 840 aa22.02■■□□□ 1.12
UBE3D-208ENST00000626828 MIS18AQ9NYP9 233 aa22.02■■□□□ 1.12
UBE3D-208ENST00000626828 CCDC184Q52MB2 194 aa22.01■■□□□ 1.11
UBE3D-208ENST00000626828 SYT17Q9BSW7 474 aa22.01■■□□□ 1.11
UBE3D-208ENST00000626828 THUMPD2Q9BTF0 503 aaKnown RBP22.01■■□□□ 1.11
UBE3D-208ENST00000626828 FHDC1Q9C0D6 1143 aaPredicted RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms