RNA–Protein interactions for RNA: ENST00000625463.1

CHD2-204, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-204ENST00000625463 CCDC175P0C221 793 aa6.15□□□□□ -1.42
CHD2-204ENST00000625463 NBPF7P0C2Y1 421 aaPredicted RBP6.15□□□□□ -1.42
CHD2-204ENST00000625463 IMPDH2P12268 514 aa6.15□□□□□ -1.42
CHD2-204ENST00000625463 MCM4P33991 863 aa6.15□□□□□ -1.42
CHD2-204ENST00000625463 RDXP35241 583 aaKnown RBP6.15□□□□□ -1.42
CHD2-204ENST00000625463 USP8P40818 1118 aa6.15□□□□□ -1.42
CHD2-204ENST00000625463 ICA1Q05084 483 aa6.15□□□□□ -1.42
CHD2-204ENST00000625463 IFT88Q13099 833 aa6.15□□□□□ -1.42
CHD2-204ENST00000625463 TMED1Q13445 227 aa6.15□□□□□ -1.42
CHD2-204ENST00000625463 NEUROD2Q15784 382 aa6.15□□□□□ -1.42
CHD2-204ENST00000625463 TBC1D10BQ4KMP7 808 aaPredicted RBP6.15□□□□□ -1.42
CHD2-204ENST00000625463 CCDC30Q5VVM6 783 aa6.15□□□□□ -1.42
CHD2-204ENST00000625463 CCDC73Q6ZRK6 1079 aa6.15□□□□□ -1.42
CHD2-204ENST00000625463 ANKRD13BQ86YJ7 626 aa6.15□□□□□ -1.42
CHD2-204ENST00000625463 IQCF2Q8IXL9 164 aa6.15□□□□□ -1.42
CHD2-204ENST00000625463 RBM12BQ8IXT5 1001 aaKnown RBP6.15□□□□□ -1.42
CHD2-204ENST00000625463 KRT222Q8N1A0 295 aa6.15□□□□□ -1.42
CHD2-204ENST00000625463 MICAL1Q8TDZ2 1067 aa6.15□□□□□ -1.42
CHD2-204ENST00000625463 SMCR8Q8TEV9 937 aaPredicted RBP6.15□□□□□ -1.42
CHD2-204ENST00000625463 SLC39A7Q92504 469 aa6.15□□□□□ -1.42
CHD2-204ENST00000625463 ANKRD7Q92527 254 aa6.15□□□□□ -1.42
CHD2-204ENST00000625463 TEKT1Q969V4 418 aa6.15□□□□□ -1.42
CHD2-204ENST00000625463 EVI5LQ96CN4 794 aa6.15□□□□□ -1.42
CHD2-204ENST00000625463 L3MBTL3Q96JM7 780 aaPredicted RBP6.15□□□□□ -1.42
CHD2-204ENST00000625463 CCDC39Q9UFE4 941 aa6.15□□□□□ -1.42
CHD2-204ENST00000625463 SMG6Q86US8 1419 aaKnown RBP6.15□□□□□ -1.43
CHD2-204ENST00000625463 CBFA2T2O43439 604 aa6.14□□□□□ -1.43
CHD2-204ENST00000625463 TRAK2O60296 914 aa6.14□□□□□ -1.43
CHD2-204ENST00000625463 HNRNPH2P55795 449 aaKnown RBP6.14□□□□□ -1.43
CHD2-204ENST00000625463 SESN3P58005 492 aa6.14□□□□□ -1.43
CHD2-204ENST00000625463 HDLBPQ00341 1268 aaKnown RBP6.14□□□□□ -1.43
CHD2-204ENST00000625463 NOLC1Q14978 699 aaKnown RBP eCLIP6.14□□□□□ -1.43
CHD2-204ENST00000625463 PDIA6Q15084 440 aa6.14□□□□□ -1.43
CHD2-204ENST00000625463 RBBP5Q15291 538 aaKnown RBP6.14□□□□□ -1.43
CHD2-204ENST00000625463 MAMSTRQ6ZN01 415 aa6.14□□□□□ -1.43
CHD2-204ENST00000625463 TDRD7Q8NHU6 1098 aaKnown RBP6.14□□□□□ -1.43
CHD2-204ENST00000625463 AGBL1Q96MI9 1066 aa6.14□□□□□ -1.43
CHD2-204ENST00000625463 DIAPH3Q9NSV4 1193 aa6.14□□□□□ -1.43
CHD2-204ENST00000625463 METRNQ9UJH8 293 aa6.14□□□□□ -1.43
CHD2-204ENST00000625463 PCDHGA4Q9Y5G9 962 aa6.14□□□□□ -1.43
CHD2-204ENST00000625463 COMMD10Q9Y6G5 202 aa6.14□□□□□ -1.43
CHD2-204ENST00000625463 RBM47A0AV96 593 aaKnown RBP6.13□□□□□ -1.43
CHD2-204ENST00000625463 ERICH4A6NGS2 130 aa6.13□□□□□ -1.43
CHD2-204ENST00000625463 PEX14O75381 377 aa6.13□□□□□ -1.43
CHD2-204ENST00000625463 PPP1R15AO75807 674 aaPredicted RBP6.13□□□□□ -1.43
CHD2-204ENST00000625463 CYP2C19P33261 490 aa6.13□□□□□ -1.43
CHD2-204ENST00000625463 SRPK2P78362 688 aaKnown RBP6.13□□□□□ -1.43
CHD2-204ENST00000625463 KCNA1Q09470 495 aa6.13□□□□□ -1.43
CHD2-204ENST00000625463 TEX35Q5T0J7 233 aa6.13□□□□□ -1.43
CHD2-204ENST00000625463 SMYD5Q6GMV2 418 aa6.13□□□□□ -1.43
CHD2-204ENST00000625463 C16orf87Q6PH81 154 aa6.13□□□□□ -1.43
CHD2-204ENST00000625463 OTUD6AQ7L8S5 288 aa6.13□□□□□ -1.43
CHD2-204ENST00000625463 SMC5Q8IY18 1101 aa6.13□□□□□ -1.43
CHD2-204ENST00000625463 AMOTL1Q8IY63 956 aa6.13□□□□□ -1.43
CHD2-204ENST00000625463 STAG1Q8WVM7 1258 aa6.13□□□□□ -1.43
CHD2-204ENST00000625463 UPF1Q92900 1129 aaKnown RBP eCLIP6.13□□□□□ -1.43
CHD2-204ENST00000625463 BHMTQ93088 406 aa6.13□□□□□ -1.43
CHD2-204ENST00000625463 DDX41Q9UJV9 622 aaKnown RBP6.13□□□□□ -1.43
CHD2-204ENST00000625463 AKAP2Q9Y2D5 859 aa6.13□□□□□ -1.43
CHD2-204ENST00000625463 THRAP3Q9Y2W1 955 aaKnown RBP6.13□□□□□ -1.43
CHD2-204ENST00000625463 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.13□□□□□ -1.43
CHD2-204ENST00000625463 MYO1CO00159 1063 aa6.12□□□□□ -1.43
CHD2-204ENST00000625463 C21orf2O43822 256 aa6.12□□□□□ -1.43
CHD2-204ENST00000625463 OATP04181 439 aa6.12□□□□□ -1.43
CHD2-204ENST00000625463 FAM163BP0C2L3 166 aa6.12□□□□□ -1.43
CHD2-204ENST00000625463 C7P10643 843 aa6.12□□□□□ -1.43
CHD2-204ENST00000625463 VCAM1P19320 739 aa6.12□□□□□ -1.43
CHD2-204ENST00000625463 PRPHP41219 470 aa6.12□□□□□ -1.43
CHD2-204ENST00000625463 MAGEA9P43362 315 aa6.12□□□□□ -1.43
CHD2-204ENST00000625463 TRPC1P48995 793 aa6.12□□□□□ -1.43
CHD2-204ENST00000625463 NASPP49321 788 aaPredicted RBP6.12□□□□□ -1.43
CHD2-204ENST00000625463 APLP1P51693 650 aa6.12□□□□□ -1.43
CHD2-204ENST00000625463 LEKR1Q6ZMV7 388 aa6.12□□□□□ -1.43
CHD2-204ENST00000625463 DHX29Q7Z478 1369 aaKnown RBP6.12□□□□□ -1.43
CHD2-204ENST00000625463 CCDC34Q96HJ3 373 aa6.12□□□□□ -1.43
CHD2-204ENST00000625463 CRACR2AQ9BSW2 395 aa6.12□□□□□ -1.43
CHD2-204ENST00000625463 TMX1Q9H3N1 280 aa6.12□□□□□ -1.43
CHD2-204ENST00000625463 RETREG1Q9H6L5 497 aa6.12□□□□□ -1.43
CHD2-204ENST00000625463 BCL2L12Q9HB09 334 aa6.12□□□□□ -1.43
CHD2-204ENST00000625463 SLC24A3Q9HC58 644 aa6.12□□□□□ -1.43
CHD2-204ENST00000625463 SPATS2LQ9NUQ6 558 aaKnown RBP6.12□□□□□ -1.43
CHD2-204ENST00000625463 SHTN1A0MZ66 631 aa6.11□□□□□ -1.43
CHD2-204ENST00000625463 UNCXA6NJT0 531 aa6.11□□□□□ -1.43
CHD2-204ENST00000625463 TIMM44O43615 452 aa6.11□□□□□ -1.43
CHD2-204ENST00000625463 TPPPO94811 219 aa6.11□□□□□ -1.43
CHD2-204ENST00000625463 SMC2O95347 1197 aa6.11□□□□□ -1.43
CHD2-204ENST00000625463 ECEL1O95672 775 aa6.11□□□□□ -1.43
CHD2-204ENST00000625463 MYBL2P10244 700 aa6.11□□□□□ -1.43
CHD2-204ENST00000625463 U2AF2P26368 475 aaKnown RBP eCLIP6.11□□□□□ -1.436e-7■■■■□ 20.3
CHD2-204ENST00000625463 EIF5P55010 431 aaKnown RBP6.11□□□□□ -1.43
CHD2-204ENST00000625463 INHBEP58166 350 aa6.11□□□□□ -1.43
CHD2-204ENST00000625463 XPCQ01831 940 aaPredicted RBP6.11□□□□□ -1.43
CHD2-204ENST00000625463 GPS2Q13227 327 aa6.11□□□□□ -1.43
CHD2-204ENST00000625463 SLC5A9Q2M3M2 681 aa6.11□□□□□ -1.43
CHD2-204ENST00000625463 TSNAXIP1Q2TAA8 658 aa6.11□□□□□ -1.43
CHD2-204ENST00000625463 NFXL1Q6ZNB6 911 aa6.11□□□□□ -1.43
CHD2-204ENST00000625463 CATIPQ7Z7H3 387 aa6.11□□□□□ -1.43
CHD2-204ENST00000625463 NCAPG2Q86XI2 1143 aa6.11□□□□□ -1.43
CHD2-204ENST00000625463 DRAXINQ8NBI3 349 aaPredicted RBP6.11□□□□□ -1.43
CHD2-204ENST00000625463 CCDC26Q8TAB7 109 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms