RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 LGR6Q9HBX8 967 aa24.65■■□□□ 1.54
PCDHB11-202ENST00000624887 AXIN2Q9Y2T1 843 aa24.65■■□□□ 1.54
PCDHB11-202ENST00000624887 KDM3BQ7LBC6 1761 aa24.65■■□□□ 1.54
PCDHB11-202ENST00000624887 SLC4A10Q6U841 1118 aa24.64■■□□□ 1.54
PCDHB11-202ENST00000624887 DDX17Q92841 729 aaKnown RBP24.64■■□□□ 1.54
PCDHB11-202ENST00000624887 RGPD5Q99666 1765 aa24.62■■□□□ 1.53
PCDHB11-202ENST00000624887 BRINP3Q76B58 766 aa24.62■■□□□ 1.53
PCDHB11-202ENST00000624887 SLAIN2Q9P270 581 aa24.62■■□□□ 1.53
PCDHB11-202ENST00000624887 OVOS2A0A0G2JMS6 1433 aa24.62■■□□□ 1.53
PCDHB11-202ENST00000624887 FKBP5Q13451 457 aaPredicted RBP24.62■■□□□ 1.53
PCDHB11-202ENST00000624887 HOXB7P09629 217 aa24.61■■□□□ 1.53
PCDHB11-202ENST00000624887 EIF4A1P60842 406 aaKnown RBP24.61■■□□□ 1.53
PCDHB11-202ENST00000624887 HDGFL1Q5TGJ6 251 aa24.61■■□□□ 1.53
PCDHB11-202ENST00000624887 NECTIN2Q92692 538 aa24.61■■□□□ 1.53
PCDHB11-202ENST00000624887 ERBB3P21860 1342 aa24.61■■□□□ 1.53
PCDHB11-202ENST00000624887 N4BP2Q86UW6 1770 aaPredicted RBP24.6■■□□□ 1.53
PCDHB11-202ENST00000624887 PXDNQ92626 1479 aa24.6■■□□□ 1.53
PCDHB11-202ENST00000624887 BECN1Q14457 450 aa24.6■■□□□ 1.53
PCDHB11-202ENST00000624887 MFAP1P55081 439 aaKnown RBP24.6■■□□□ 1.53
PCDHB11-202ENST00000624887 TEFQ10587 303 aa24.6■■□□□ 1.53
PCDHB11-202ENST00000624887 C1orf141Q5JVX7 400 aa24.6■■□□□ 1.53
PCDHB11-202ENST00000624887 ZC3H6P61129 1189 aaKnown RBP24.59■■□□□ 1.53
PCDHB11-202ENST00000624887 C22orf23Q9BZE7 217 aa24.59■■□□□ 1.53
PCDHB11-202ENST00000624887 PXDNLA1KZ92 1463 aa24.59■■□□□ 1.53
PCDHB11-202ENST00000624887 MPRIPQ6WCQ1 1025 aa24.58■■□□□ 1.53
PCDHB11-202ENST00000624887 CHMP4AQ9BY43 222 aa24.58■■□□□ 1.53
PCDHB11-202ENST00000624887 RNMTO43148 476 aaKnown RBP24.58■■□□□ 1.52
PCDHB11-202ENST00000624887 RTL5Q5HYW3 569 aaPredicted RBP24.57■■□□□ 1.52
PCDHB11-202ENST00000624887 TNS3Q68CZ2 1445 aa24.57■■□□□ 1.52
PCDHB11-202ENST00000624887 BTBD11A6QL63 1104 aa24.56■■□□□ 1.52
PCDHB11-202ENST00000624887 HMMRO75330 724 aa24.56■■□□□ 1.52
PCDHB11-202ENST00000624887 GNAI2P04899 355 aa24.56■■□□□ 1.52
PCDHB11-202ENST00000624887 PLEKHM2Q8IWE5 1019 aa24.56■■□□□ 1.52
PCDHB11-202ENST00000624887 USP35Q9P2H5 1018 aa24.56■■□□□ 1.52
PCDHB11-202ENST00000624887 GNAI3P08754 354 aa24.55■■□□□ 1.52
PCDHB11-202ENST00000624887 SPATA31A3Q5VYP0 1347 aa24.55■■□□□ 1.52
PCDHB11-202ENST00000624887 COL18A1P39060 1754 aa24.54■■□□□ 1.52
PCDHB11-202ENST00000624887 ADAMTS7Q9UKP4 1686 aa24.54■■□□□ 1.52
PCDHB11-202ENST00000624887 KCNQ3O43525 872 aa24.53■■□□□ 1.52
PCDHB11-202ENST00000624887 PHAXQ9H814 394 aaKnown RBP24.52■■□□□ 1.52
PCDHB11-202ENST00000624887 SIPA1L3O60292 1781 aaPredicted RBP24.52■■□□□ 1.52
PCDHB11-202ENST00000624887 CRYBG1Q9Y4K1 1723 aa24.52■■□□□ 1.52
PCDHB11-202ENST00000624887 ABCC6O95255 1503 aa24.51■■□□□ 1.51
PCDHB11-202ENST00000624887 EIF2S2P20042 333 aaKnown RBP24.51■■□□□ 1.51
PCDHB11-202ENST00000624887 SOS2Q07890 1332 aaPredicted RBP24.5■■□□□ 1.51
PCDHB11-202ENST00000624887 RBM25P49756 843 aaKnown RBP24.5■■□□□ 1.51
PCDHB11-202ENST00000624887 GSPT1P15170 499 aaKnown RBP24.49■■□□□ 1.51
PCDHB11-202ENST00000624887 C16orf71Q8IYS4 520 aaPredicted RBP24.49■■□□□ 1.51
PCDHB11-202ENST00000624887 TTC22Q5TAA0 569 aa24.49■■□□□ 1.51
PCDHB11-202ENST00000624887 TBC1D9Q6ZT07 1266 aa24.49■■□□□ 1.51
PCDHB11-202ENST00000624887 RAPGEF4Q8WZA2 1011 aa24.49■■□□□ 1.51
PCDHB11-202ENST00000624887 TBC1D2Q9BYX2 928 aa24.49■■□□□ 1.51
PCDHB11-202ENST00000624887 CHPF2Q9P2E5 772 aa24.49■■□□□ 1.51
PCDHB11-202ENST00000624887 HEG1Q9ULI3 1381 aa24.48■■□□□ 1.51
PCDHB11-202ENST00000624887 NLRP2Q9NX02 1062 aa24.48■■□□□ 1.51
PCDHB11-202ENST00000624887 USP44Q9H0E7 712 aa24.47■■□□□ 1.51
PCDHB11-202ENST00000624887 CABLES1Q8TDN4 633 aa24.47■■□□□ 1.51
PCDHB11-202ENST00000624887 SMARCA5O60264 1052 aaPredicted RBP24.46■■□□□ 1.51
PCDHB11-202ENST00000624887 CDC45O75419 566 aa24.46■■□□□ 1.51
PCDHB11-202ENST00000624887 ATP8B2P98198 1209 aa24.46■■□□□ 1.51
PCDHB11-202ENST00000624887 PLEKHG2Q9H7P9 1386 aa24.46■■□□□ 1.51
PCDHB11-202ENST00000624887 CPDO75976 1380 aa24.45■■□□□ 1.51
PCDHB11-202ENST00000624887 GIGYF1O75420 1035 aaPredicted RBP24.45■■□□□ 1.5
PCDHB11-202ENST00000624887 TATP17735 454 aaPredicted RBP24.45■■□□□ 1.5
PCDHB11-202ENST00000624887 OTUD7AQ8TE49 926 aaPredicted RBP24.45■■□□□ 1.5
PCDHB11-202ENST00000624887 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.45■■□□□ 1.5
PCDHB11-202ENST00000624887 APBB1O00213 710 aa24.44■■□□□ 1.5
PCDHB11-202ENST00000624887 NFKBIBQ15653 356 aa24.44■■□□□ 1.5
PCDHB11-202ENST00000624887 DBF4Q9UBU7 674 aaPredicted RBP24.44■■□□□ 1.5
PCDHB11-202ENST00000624887 LTBP4Q8N2S1 1624 aa24.44■■□□□ 1.5
PCDHB11-202ENST00000624887 SRCIN1Q9C0H9 1055 aa24.43■■□□□ 1.5
PCDHB11-202ENST00000624887 LRRFIP2Q9Y608 721 aaKnown RBP24.43■■□□□ 1.5
PCDHB11-202ENST00000624887 SCN11AQ9UI33 1791 aa24.43■■□□□ 1.5
PCDHB11-202ENST00000624887 EIF5BO60841 1220 aaKnown RBP24.43■■□□□ 1.5
PCDHB11-202ENST00000624887 UBTFL1P0CB47 393 aaPredicted RBP24.43■■□□□ 1.5
PCDHB11-202ENST00000624887 SPG7Q9UQ90 795 aa24.43■■□□□ 1.5
PCDHB11-202ENST00000624887 MEGF6O75095 1541 aa24.42■■□□□ 1.5
PCDHB11-202ENST00000624887 PNMA6EA0A0J9YXQ4 647 aa24.42■■□□□ 1.5
PCDHB11-202ENST00000624887 DNAAF4Q8WXU2 420 aa24.42■■□□□ 1.5
PCDHB11-202ENST00000624887 CSB-PGBD3P0DP91 1061 aa24.42■■□□□ 1.5
PCDHB11-202ENST00000624887 DEKP35659 375 aaKnown RBP24.42■■□□□ 1.5
PCDHB11-202ENST00000624887 PI4KAP2A4QPH2 592 aa24.41■■□□□ 1.5
PCDHB11-202ENST00000624887 CHRNA2Q15822 529 aa24.41■■□□□ 1.5
PCDHB11-202ENST00000624887 PI4KAP1Q8N8J0 262 aa24.41■■□□□ 1.5
PCDHB11-202ENST00000624887 KDM6AO15550 1401 aaPredicted RBP24.4■■□□□ 1.5
PCDHB11-202ENST00000624887 PHKG2P15735 406 aa24.4■■□□□ 1.5
PCDHB11-202ENST00000624887 BEND3Q5T5X7 828 aa24.4■■□□□ 1.5
PCDHB11-202ENST00000624887 OSBPL3Q9H4L5 887 aa24.4■■□□□ 1.5
PCDHB11-202ENST00000624887 EXOC6BQ9Y2D4 811 aa24.4■■□□□ 1.5
PCDHB11-202ENST00000624887 NHSL1Q5SYE7 1610 aa24.4■■□□□ 1.5
PCDHB11-202ENST00000624887 ANTXR1Q9H6X2 564 aa24.39■■□□□ 1.49
PCDHB11-202ENST00000624887 ADCY9O60503 1353 aa24.39■■□□□ 1.49
PCDHB11-202ENST00000624887 ANXA1P04083 346 aa24.38■■□□□ 1.49
PCDHB11-202ENST00000624887 LRRCC1Q9C099 1032 aa24.38■■□□□ 1.49
PCDHB11-202ENST00000624887 SLC52A2Q9HAB3 445 aa24.38■■□□□ 1.49
PCDHB11-202ENST00000624887 IBTKQ9P2D0 1353 aaPredicted RBP24.38■■□□□ 1.49
PCDHB11-202ENST00000624887 IFNL2Q8IZJ0 200 aa24.38■■□□□ 1.49
PCDHB11-202ENST00000624887 SDSP20132 328 aa24.37■■□□□ 1.49
PCDHB11-202ENST00000624887 SSH3Q8TE77 659 aa24.37■■□□□ 1.49
PCDHB11-202ENST00000624887 PKD1L3Q7Z443 1732 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms