RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 NPHP4O75161 1426 aaPredicted RBP10.29□□□□□ -0.76
SND1-IT1-201ENST00000623342 MCM4P33991 863 aa10.29□□□□□ -0.76
SND1-IT1-201ENST00000623342 DDIT3P35638 169 aa10.29□□□□□ -0.76
SND1-IT1-201ENST00000623342 CASC1Q6TDU7 716 aa10.29□□□□□ -0.76
SND1-IT1-201ENST00000623342 PXDNLA1KZ92 1463 aa10.29□□□□□ -0.76
SND1-IT1-201ENST00000623342 SDSP20132 328 aa10.28□□□□□ -0.76
SND1-IT1-201ENST00000623342 N4BP2Q86UW6 1770 aaPredicted RBP10.28□□□□□ -0.76
SND1-IT1-201ENST00000623342 HDGFL1Q5TGJ6 251 aa10.28□□□□□ -0.76
SND1-IT1-201ENST00000623342 ORAI2Q96SN7 254 aa10.28□□□□□ -0.76
SND1-IT1-201ENST00000623342 OSBPL3Q9H4L5 887 aa10.28□□□□□ -0.76
SND1-IT1-201ENST00000623342 CIZ1Q9ULV3 898 aaPredicted RBP10.28□□□□□ -0.76
SND1-IT1-201ENST00000623342 MED1Q15648 1581 aaPredicted RBP10.28□□□□□ -0.76
SND1-IT1-201ENST00000623342 ZBTB7CA1YPR0 619 aa10.27□□□□□ -0.77
SND1-IT1-201ENST00000623342 K7ELQ4 463 aaPredicted RBP10.27□□□□□ -0.77
SND1-IT1-201ENST00000623342 ATP8B2P98198 1209 aa10.27□□□□□ -0.77
SND1-IT1-201ENST00000623342 USP26Q9BXU7 913 aa10.27□□□□□ -0.77
SND1-IT1-201ENST00000623342 STRCP1A6NGW2 1772 aa10.26□□□□□ -0.77
SND1-IT1-201ENST00000623342 CD2BP2O95400 341 aaKnown RBP10.26□□□□□ -0.77
SND1-IT1-201ENST00000623342 PDE1AP54750 535 aa10.26□□□□□ -0.77
SND1-IT1-201ENST00000623342 DDX17Q92841 729 aaKnown RBP10.26□□□□□ -0.77
SND1-IT1-201ENST00000623342 RBM42Q9BTD8 480 aaKnown RBP10.26□□□□□ -0.77
SND1-IT1-201ENST00000623342 CHMP4AQ9BY43 222 aa10.26□□□□□ -0.77
SND1-IT1-201ENST00000623342 HOXB7P09629 217 aa10.26□□□□□ -0.77
SND1-IT1-201ENST00000623342 EIF4A1P60842 406 aaKnown RBP10.26□□□□□ -0.77
SND1-IT1-201ENST00000623342 RABEP1Q15276 862 aa10.26□□□□□ -0.77
SND1-IT1-201ENST00000623342 PLEKHO1Q53GL0 409 aaPredicted RBP10.26□□□□□ -0.77
SND1-IT1-201ENST00000623342 AKAP4Q5JQC9 854 aa10.26□□□□□ -0.77
SND1-IT1-201ENST00000623342 LRRCC1Q9C099 1032 aa10.26□□□□□ -0.77
SND1-IT1-201ENST00000623342 LGR6Q9HBX8 967 aa10.26□□□□□ -0.77
SND1-IT1-201ENST00000623342 EXOC6BQ9Y2D4 811 aa10.26□□□□□ -0.77
SND1-IT1-201ENST00000623342 SLIT3O75094 1523 aa10.26□□□□□ -0.77
SND1-IT1-201ENST00000623342 LMO7Q8WWI1 1683 aa10.25□□□□□ -0.77
SND1-IT1-201ENST00000623342 GCP02774 474 aa10.25□□□□□ -0.77
SND1-IT1-201ENST00000623342 HSP90AA1P07900 732 aaKnown RBP10.25□□□□□ -0.77
SND1-IT1-201ENST00000623342 ARHGEF25Q86VW2 580 aa10.25□□□□□ -0.77
SND1-IT1-201ENST00000623342 LRRC59Q96AG4 307 aaKnown RBP10.25□□□□□ -0.77
SND1-IT1-201ENST00000623342 RGPD2P0DJD1 1756 aa10.25□□□□□ -0.77
SND1-IT1-201ENST00000623342 KDM3BQ7LBC6 1761 aa10.25□□□□□ -0.77
SND1-IT1-201ENST00000623342 PNMA6EA0A0J9YXQ4 647 aa10.25□□□□□ -0.77
SND1-IT1-201ENST00000623342 AMOTQ4VCS5 1084 aa10.25□□□□□ -0.77
SND1-IT1-201ENST00000623342 ZNF530Q6P9A1 599 aaPredicted RBP10.25□□□□□ -0.77
SND1-IT1-201ENST00000623342 USP44Q9H0E7 712 aa10.25□□□□□ -0.77
SND1-IT1-201ENST00000623342 PHAXQ9H814 394 aaKnown RBP10.25□□□□□ -0.77
SND1-IT1-201ENST00000623342 LRRFIP2Q9Y608 721 aaKnown RBP10.25□□□□□ -0.77
SND1-IT1-201ENST00000623342 IBTKQ9P2D0 1353 aaPredicted RBP10.24□□□□□ -0.77
SND1-IT1-201ENST00000623342 DDX11L8A8MPP1 907 aa10.24□□□□□ -0.77
SND1-IT1-201ENST00000623342 REC8O95072 547 aa10.24□□□□□ -0.77
SND1-IT1-201ENST00000623342 UBTFL1P0CB47 393 aaPredicted RBP10.24□□□□□ -0.77
SND1-IT1-201ENST00000623342 TEFQ10587 303 aa10.24□□□□□ -0.77
SND1-IT1-201ENST00000623342 NCAPD2Q15021 1401 aa10.24□□□□□ -0.77
SND1-IT1-201ENST00000623342 SALL3Q9BXA9 1300 aa10.24□□□□□ -0.77
SND1-IT1-201ENST00000623342 EIF2S2P20042 333 aaKnown RBP10.24□□□□□ -0.77
SND1-IT1-201ENST00000623342 BTBD11A6QL63 1104 aa10.23□□□□□ -0.77
SND1-IT1-201ENST00000623342 ERC2O15083 957 aa10.23□□□□□ -0.77
SND1-IT1-201ENST00000623342 RAB3GAP1Q15042 981 aa10.23□□□□□ -0.77
SND1-IT1-201ENST00000623342 SRCIN1Q9C0H9 1055 aa10.23□□□□□ -0.77
SND1-IT1-201ENST00000623342 KDM4FA0A1W2PPD8 638 aa10.23□□□□□ -0.77
SND1-IT1-201ENST00000623342 TRAK2O60296 914 aa10.23□□□□□ -0.77
SND1-IT1-201ENST00000623342 MX1P20591 662 aa10.23□□□□□ -0.77
SND1-IT1-201ENST00000623342 C1orf141Q5JVX7 400 aa10.23□□□□□ -0.77
SND1-IT1-201ENST00000623342 IL27Q8NEV9 243 aa10.23□□□□□ -0.77
SND1-IT1-201ENST00000623342 ANKRD24Q8TF21 1146 aa10.23□□□□□ -0.77
SND1-IT1-201ENST00000623342 TNPO1Q92973 898 aaKnown RBP10.23□□□□□ -0.77
SND1-IT1-201ENST00000623342 BRPF3Q9ULD4 1205 aa10.23□□□□□ -0.77
SND1-IT1-201ENST00000623342 OVOS2A0A0G2JMS6 1433 aa10.22□□□□□ -0.77
SND1-IT1-201ENST00000623342 LMOD2Q6P5Q4 547 aa10.22□□□□□ -0.77
SND1-IT1-201ENST00000623342 MPRIPQ6WCQ1 1025 aa10.22□□□□□ -0.77
SND1-IT1-201ENST00000623342 SSH3Q8TE77 659 aa10.22□□□□□ -0.77
SND1-IT1-201ENST00000623342 CHPF2Q9P2E5 772 aa10.22□□□□□ -0.77
SND1-IT1-201ENST00000623342 TRPM3Q9HCF6 1732 aaPredicted RBP10.22□□□□□ -0.77
SND1-IT1-201ENST00000623342 RNMTO43148 476 aaKnown RBP10.22□□□□□ -0.77
SND1-IT1-201ENST00000623342 KCNQ3O43525 872 aa10.22□□□□□ -0.77
SND1-IT1-201ENST00000623342 L1TD1Q5T7N2 865 aaKnown RBP10.22□□□□□ -0.77
SND1-IT1-201ENST00000623342 KRT28Q7Z3Y7 464 aa10.22□□□□□ -0.77
SND1-IT1-201ENST00000623342 PROSER2Q86WR7 435 aaPredicted RBP10.22□□□□□ -0.77
SND1-IT1-201ENST00000623342 PIAS4Q8N2W9 510 aaPredicted RBP10.22□□□□□ -0.77
SND1-IT1-201ENST00000623342 GBP4Q96PP9 640 aa10.22□□□□□ -0.77
SND1-IT1-201ENST00000623342 FOXD4L1Q9NU39 408 aa10.22□□□□□ -0.77
SND1-IT1-201ENST00000623342 STAP2Q9UGK3 403 aa10.22□□□□□ -0.77
SND1-IT1-201ENST00000623342 KIF1AQ12756 1690 aa10.22□□□□□ -0.77
SND1-IT1-201ENST00000623342 CAMTA1Q9Y6Y1 1673 aa10.21□□□□□ -0.78
SND1-IT1-201ENST00000623342 TUBGCP6Q96RT7 1819 aa10.21□□□□□ -0.78
SND1-IT1-201ENST00000623342 PXDNQ92626 1479 aa10.21□□□□□ -0.78
SND1-IT1-201ENST00000623342 RAB11FIP3O75154 756 aa10.21□□□□□ -0.78
SND1-IT1-201ENST00000623342 DNAAF4Q8WXU2 420 aa10.21□□□□□ -0.78
SND1-IT1-201ENST00000623342 C1orf167Q5SNV9 1468 aa10.2□□□□□ -0.78
SND1-IT1-201ENST00000623342 AOX1Q06278 1338 aa10.2□□□□□ -0.78
SND1-IT1-201ENST00000623342 ST18O60284 1047 aa10.2□□□□□ -0.78
SND1-IT1-201ENST00000623342 PTMSP20962 102 aa10.2□□□□□ -0.78
SND1-IT1-201ENST00000623342 POLA2Q14181 598 aa10.2□□□□□ -0.78
SND1-IT1-201ENST00000623342 BEND3Q5T5X7 828 aa10.2□□□□□ -0.78
SND1-IT1-201ENST00000623342 TSHZ3Q63HK5 1081 aa10.2□□□□□ -0.78
SND1-IT1-201ENST00000623342 PPP1R42Q7Z4L9 355 aa10.2□□□□□ -0.78
SND1-IT1-201ENST00000623342 MST1RQ04912 1400 aa10.2□□□□□ -0.78
SND1-IT1-201ENST00000623342 PI4KAP2A4QPH2 592 aa10.19□□□□□ -0.78
SND1-IT1-201ENST00000623342 PI4KAP1Q8N8J0 262 aa10.19□□□□□ -0.78
SND1-IT1-201ENST00000623342 C19orf44Q9H6X5 657 aa10.19□□□□□ -0.78
SND1-IT1-201ENST00000623342 DBF4Q9UBU7 674 aaPredicted RBP10.19□□□□□ -0.78
SND1-IT1-201ENST00000623342 ESYT1Q9BSJ8 1104 aa10.19□□□□□ -0.78
SND1-IT1-201ENST00000623342 AXIN2Q9Y2T1 843 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms