RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 SIK1P57059 783 aa15.19■□□□□ 0.02
LINC00963-214ENST00000622680 ITPK1Q13572 414 aa15.19■□□□□ 0.02
LINC00963-214ENST00000622680 POLR3GLQ9BT43 218 aa15.19■□□□□ 0.02
LINC00963-214ENST00000622680 TMOD3Q9NYL9 352 aa15.19■□□□□ 0.02
LINC00963-214ENST00000622680 ASAP1Q9ULH1 1129 aa15.19■□□□□ 0.02
LINC00963-214ENST00000622680 KDRP35968 1356 aa15.19■□□□□ 0.02
LINC00963-214ENST00000622680 TRIM26Q12899 539 aaPredicted RBP15.18■□□□□ 0.02
LINC00963-214ENST00000622680 POLKQ9UBT6 870 aa15.18■□□□□ 0.02
LINC00963-214ENST00000622680 ADAMTS7Q9UKP4 1686 aa15.18■□□□□ 0.02
LINC00963-214ENST00000622680 GNPATO15228 680 aa15.17■□□□□ 0.02
LINC00963-214ENST00000622680 PHKG2P15735 406 aa15.17■□□□□ 0.02
LINC00963-214ENST00000622680 SSFA2P28290 1259 aa15.17■□□□□ 0.02
LINC00963-214ENST00000622680 EIF4A2Q14240 407 aaKnown RBP15.17■□□□□ 0.02
LINC00963-214ENST00000622680 ZNF526Q8TF50 670 aaPredicted RBP15.17■□□□□ 0.02
LINC00963-214ENST00000622680 PXDNLA1KZ92 1463 aa15.16■□□□□ 0.02
LINC00963-214ENST00000622680 ATP6V1AP38606 617 aa15.16■□□□□ 0.02
LINC00963-214ENST00000622680 IFNL2Q8IZJ0 200 aa15.16■□□□□ 0.02
LINC00963-214ENST00000622680 KDM6AO15550 1401 aaPredicted RBP15.16■□□□□ 0.02
LINC00963-214ENST00000622680 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.15■□□□□ 0.02
LINC00963-214ENST00000622680 CACNA1SQ13698 1873 aa15.14■□□□□ 0.01
LINC00963-214ENST00000622680 DLEC1Q9Y238 1755 aa15.14■□□□□ 0.01
LINC00963-214ENST00000622680 HMGB2P26583 209 aaKnown RBP15.14■□□□□ 0.01
LINC00963-214ENST00000622680 GPBP1L1Q9HC44 474 aaPredicted RBP15.14■□□□□ 0.01
LINC00963-214ENST00000622680 ATG3Q9NT62 314 aa15.14■□□□□ 0.01
LINC00963-214ENST00000622680 C10orf71Q711Q0 1435 aa15.13■□□□□ 0.01
LINC00963-214ENST00000622680 WDR90Q96KV7 1748 aa15.12■□□□□ 0.01
LINC00963-214ENST00000622680 UBR2Q8IWV8 1755 aa15.12■□□□□ 0.01
LINC00963-214ENST00000622680 SLC4A9Q96Q91 983 aa15.12■□□□□ 0.01
LINC00963-214ENST00000622680 PLEKHG2Q9H7P9 1386 aa15.11■□□□□ 0.01
LINC00963-214ENST00000622680 MMP10P09238 476 aa15.11■□□□□ 0.01
LINC00963-214ENST00000622680 RBM42Q9BTD8 480 aaKnown RBP15.11■□□□□ 0.01
LINC00963-214ENST00000622680 TIAM2Q8IVF5 1701 aa15.09■□□□□ 0.01
LINC00963-214ENST00000622680 SIPA1L3O60292 1781 aaPredicted RBP15.09■□□□□ 0.01
LINC00963-214ENST00000622680 ZNF530Q6P9A1 599 aaPredicted RBP15.09■□□□□ 0.01
LINC00963-214ENST00000622680 TNRC6CQ9HCJ0 1690 aaKnown RBP15.09■□□□□ 0.01
LINC00963-214ENST00000622680 AEBP1Q8IUX7 1158 aa15.08■□□□□ 0
LINC00963-214ENST00000622680 RTCBQ9Y3I0 505 aaKnown RBP15.08■□□□□ 0
LINC00963-214ENST00000622680 NRXN2Q9P2S2 1712 aa15.08■□□□□ 0
LINC00963-214ENST00000622680 ERVV-2B6SEH9 535 aa15.07■□□□□ 0
LINC00963-214ENST00000622680 HSPA5P11021 654 aaKnown RBP15.07■□□□□ 0
LINC00963-214ENST00000622680 DCAF5Q96JK2 942 aa15.07■□□□□ 0
LINC00963-214ENST00000622680 PCGF6Q9BYE7 350 aa15.07■□□□□ 0
LINC00963-214ENST00000622680 PANK3Q9H999 370 aa15.07■□□□□ 0
LINC00963-214ENST00000622680 CNTNAP4Q9C0A0 1308 aa15.07■□□□□ 0
LINC00963-214ENST00000622680 ANKRD31Q8N7Z5 1873 aa15.06■□□□□ 0
LINC00963-214ENST00000622680 TRAPPC3LQ5T215 181 aa15.06■□□□□ 0
LINC00963-214ENST00000622680 ARHGEF1Q92888 912 aaKnown RBP15.06■□□□□ 0
LINC00963-214ENST00000622680 TIMELESSQ9UNS1 1208 aa15.06■□□□□ 0
LINC00963-214ENST00000622680 A0A0G2JLW4 131 aa15.05■□□□□ -0
LINC00963-214ENST00000622680 PLEKHO1Q53GL0 409 aaPredicted RBP15.05■□□□□ -0
LINC00963-214ENST00000622680 BCS1LQ9Y276 419 aa15.05■□□□□ -0
LINC00963-214ENST00000622680 DICER1Q9UPY3 1922 aaKnown RBP15.05■□□□□ -0
LINC00963-214ENST00000622680 MRC1P22897 1456 aa15.04■□□□□ -0
LINC00963-214ENST00000622680 PTCD1O75127 700 aaKnown RBP15.04■□□□□ -0
LINC00963-214ENST00000622680 HSP90AB1P08238 724 aaKnown RBP15.04■□□□□ -0
LINC00963-214ENST00000622680 GYS1P13807 737 aa15.04■□□□□ -0
LINC00963-214ENST00000622680 HSPA6P17066 643 aa15.04■□□□□ -0
LINC00963-214ENST00000622680 CABP4P57796 275 aa15.04■□□□□ -0
LINC00963-214ENST00000622680 COL11A2P13942 1736 aaPredicted RBP15.03■□□□□ -0
LINC00963-214ENST00000622680 SCN7AQ01118 1682 aa15.03■□□□□ -0
LINC00963-214ENST00000622680 PCNTO95613 3336 aa15.03■□□□□ -0
LINC00963-214ENST00000622680 CLSPNQ9HAW4 1339 aa15.03■□□□□ -0
LINC00963-214ENST00000622680 KIF3CO14782 793 aa15.03■□□□□ -0
LINC00963-214ENST00000622680 RPS6KA4O75676 772 aa15.03■□□□□ -0
LINC00963-214ENST00000622680 DPEP1P16444 411 aa15.03■□□□□ -0
LINC00963-214ENST00000622680 RFC4P35249 363 aa15.03■□□□□ -0
LINC00963-214ENST00000622680 EIF4G2P78344 907 aaKnown RBP eCLIP15.03■□□□□ -01e-7■■■■□ 25.4
LINC00963-214ENST00000622680 NLGN1Q8N2Q7 840 aa15.03■□□□□ -0
LINC00963-214ENST00000622680 KCPQ6ZWJ8 1503 aa15.02■□□□□ -0
LINC00963-214ENST00000622680 ADRA2BP18089 450 aa15.02■□□□□ -0
LINC00963-214ENST00000622680 CRKLP46109 303 aaKnown RBP15.02■□□□□ -0
LINC00963-214ENST00000622680 C1orf141Q5JVX7 400 aa15.02■□□□□ -0
LINC00963-214ENST00000622680 RC3H1Q5TC82 1133 aaKnown RBP15.02■□□□□ -0
LINC00963-214ENST00000622680 CCDC87Q9NVE4 849 aa15.02■□□□□ -0
LINC00963-214ENST00000622680 SRP68Q9UHB9 627 aaKnown RBP15.02■□□□□ -0
LINC00963-214ENST00000622680 MTHFSP49914 203 aa15.01□□□□□ -0.01
LINC00963-214ENST00000622680 TGFB2P61812 414 aa15.01□□□□□ -0.01
LINC00963-214ENST00000622680 AMOTQ4VCS5 1084 aa15.01□□□□□ -0.01
LINC00963-214ENST00000622680 SULT6B1Q6IMI4 303 aa15.01□□□□□ -0.01
LINC00963-214ENST00000622680 MORC1Q86VD1 984 aa15.01□□□□□ -0.01
LINC00963-214ENST00000622680 PARP3Q9Y6F1 533 aa15.01□□□□□ -0.01
LINC00963-214ENST00000622680 BCORQ6W2J9 1755 aa15.01□□□□□ -0.01
LINC00963-214ENST00000622680 FCHSD2O94868 740 aa15□□□□□ -0.01
LINC00963-214ENST00000622680 NFATC2IPQ8NCF5 419 aa15□□□□□ -0.01
LINC00963-214ENST00000622680 USP42Q9H9J4 1324 aaKnown RBP14.99□□□□□ -0.01
LINC00963-214ENST00000622680 ARFGEF2Q9Y6D5 1785 aa14.99□□□□□ -0.01
LINC00963-214ENST00000622680 DDR1Q08345 913 aa14.99□□□□□ -0.01
LINC00963-214ENST00000622680 ARHGAP27Q6ZUM4 889 aa14.99□□□□□ -0.01
LINC00963-214ENST00000622680 FER1L6Q2WGJ9 1857 aa14.99□□□□□ -0.01
LINC00963-214ENST00000622680 FKBP8Q14318 412 aa14.98□□□□□ -0.01
LINC00963-214ENST00000622680 IFFO2Q5TF58 517 aa14.98□□□□□ -0.01
LINC00963-214ENST00000622680 NMRK2Q9NPI5 230 aa14.98□□□□□ -0.01
LINC00963-214ENST00000622680 KCNA3P22001 575 aa14.97□□□□□ -0.01
LINC00963-214ENST00000622680 IL13P35225 146 aa14.97□□□□□ -0.01
LINC00963-214ENST00000622680 CHRNA5P30532 468 aa14.95□□□□□ -0.02
LINC00963-214ENST00000622680 INTS5Q6P9B9 1019 aaKnown RBP14.95□□□□□ -0.02
LINC00963-214ENST00000622680 DNAJC10Q8IXB1 793 aa14.95□□□□□ -0.02
LINC00963-214ENST00000622680 KNSTRNQ9Y448 316 aa14.95□□□□□ -0.02
LINC00963-214ENST00000622680 DLG5Q8TDM6 1919 aa14.95□□□□□ -0.02
LINC00963-214ENST00000622680 HMOX1P09601 288 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms