RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 ST7Q9NRC1 585 aa11.69□□□□□ -0.54
TNFAIP3-210ENST00000620204 SMC3Q9UQE7 1217 aa11.69□□□□□ -0.54
TNFAIP3-210ENST00000620204 SPHKAPQ2M3C7 1700 aa11.69□□□□□ -0.54
TNFAIP3-210ENST00000620204 C14orf37Q86TY3 774 aa11.69□□□□□ -0.54
TNFAIP3-210ENST00000620204 GTF3C6Q969F1 213 aa11.69□□□□□ -0.54
TNFAIP3-210ENST00000620204 EXOC6BQ9Y2D4 811 aa11.69□□□□□ -0.54
TNFAIP3-210ENST00000620204 SCAF11Q99590 1463 aaKnown RBP11.69□□□□□ -0.54
TNFAIP3-210ENST00000620204 CCDC192P0DO97 292 aa11.69□□□□□ -0.54
TNFAIP3-210ENST00000620204 FILIP1Q7Z7B0 1213 aa11.69□□□□□ -0.54
TNFAIP3-210ENST00000620204 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.69□□□□□ -0.54
TNFAIP3-210ENST00000620204 NRBP1Q9UHY1 535 aa11.69□□□□□ -0.54
TNFAIP3-210ENST00000620204 SRCIN1Q9C0H9 1055 aa11.68□□□□□ -0.54
TNFAIP3-210ENST00000620204 PALD1Q9ULE6 856 aa11.68□□□□□ -0.54
TNFAIP3-210ENST00000620204 SYTL4Q96C24 671 aaPredicted RBP11.68□□□□□ -0.54
TNFAIP3-210ENST00000620204 CALCOCO1Q9P1Z2 691 aa11.68□□□□□ -0.54
TNFAIP3-210ENST00000620204 EID1Q9Y6B2 187 aa11.68□□□□□ -0.54
TNFAIP3-210ENST00000620204 MAP3K4Q9Y6R4 1608 aa11.68□□□□□ -0.54
TNFAIP3-210ENST00000620204 DCTN1Q14203 1278 aa11.68□□□□□ -0.54
TNFAIP3-210ENST00000620204 DNAJC2Q99543 621 aaKnown RBP11.68□□□□□ -0.54
TNFAIP3-210ENST00000620204 API5Q9BZZ5 524 aaKnown RBP11.68□□□□□ -0.54
TNFAIP3-210ENST00000620204 HDGFP51858 240 aaKnown RBP11.67□□□□□ -0.54
TNFAIP3-210ENST00000620204 GABPB1Q06547 395 aaPredicted RBP11.67□□□□□ -0.54
TNFAIP3-210ENST00000620204 PHF23Q9BUL5 403 aaPredicted RBP11.67□□□□□ -0.54
TNFAIP3-210ENST00000620204 KCNF1Q9H3M0 494 aa11.67□□□□□ -0.54
TNFAIP3-210ENST00000620204 EVC2Q86UK5 1308 aa11.67□□□□□ -0.54
TNFAIP3-210ENST00000620204 TPM3P06753 285 aa11.67□□□□□ -0.54
TNFAIP3-210ENST00000620204 CTNNA3Q9UI47 895 aa11.67□□□□□ -0.54
TNFAIP3-210ENST00000620204 RPGRIP1LQ68CZ1 1315 aa11.67□□□□□ -0.54
TNFAIP3-210ENST00000620204 NPC1L1Q9UHC9 1359 aa11.67□□□□□ -0.54
TNFAIP3-210ENST00000620204 TRPM1Q7Z4N2 1603 aa11.66□□□□□ -0.54
TNFAIP3-210ENST00000620204 MCM2P49736 904 aa11.66□□□□□ -0.54
TNFAIP3-210ENST00000620204 DNM1Q05193 864 aaKnown RBP11.66□□□□□ -0.54
TNFAIP3-210ENST00000620204 TERF2Q15554 542 aa11.66□□□□□ -0.54
TNFAIP3-210ENST00000620204 ALDH1L2Q3SY69 923 aa11.66□□□□□ -0.54
TNFAIP3-210ENST00000620204 RNF17Q9BXT8 1623 aaKnown RBP11.66□□□□□ -0.54
TNFAIP3-210ENST00000620204 TAF7LQ5H9L4 462 aa11.66□□□□□ -0.54
TNFAIP3-210ENST00000620204 NOL10Q9BSC4 688 aaKnown RBP11.66□□□□□ -0.54
TNFAIP3-210ENST00000620204 TAOK2Q9UL54 1235 aa11.66□□□□□ -0.54
TNFAIP3-210ENST00000620204 ELF2Q15723 593 aa11.65□□□□□ -0.54
TNFAIP3-210ENST00000620204 CEP135Q66GS9 1140 aa11.65□□□□□ -0.54
TNFAIP3-210ENST00000620204 SPTLC3Q9NUV7 552 aa11.65□□□□□ -0.54
TNFAIP3-210ENST00000620204 ATP6V1DQ9Y5K8 247 aa11.65□□□□□ -0.54
TNFAIP3-210ENST00000620204 MROH1Q8NDA8 1641 aa11.65□□□□□ -0.54
TNFAIP3-210ENST00000620204 SLFN14P0C7P3 912 aa11.65□□□□□ -0.54
TNFAIP3-210ENST00000620204 UBE2HP62256 183 aa11.65□□□□□ -0.54
TNFAIP3-210ENST00000620204 FAM173BQ6P4H8 233 aa11.65□□□□□ -0.54
TNFAIP3-210ENST00000620204 ZNF215Q9UL58 517 aaPredicted RBP11.65□□□□□ -0.54
TNFAIP3-210ENST00000620204 GOLGA6L19H0YKK7 550 aa11.65□□□□□ -0.54
TNFAIP3-210ENST00000620204 VAMP4O75379 141 aa11.65□□□□□ -0.54
TNFAIP3-210ENST00000620204 IRX3P78415 501 aaPredicted RBP11.65□□□□□ -0.54
TNFAIP3-210ENST00000620204 KRT24Q2M2I5 525 aa11.65□□□□□ -0.54
TNFAIP3-210ENST00000620204 MRPL50Q8N5N7 158 aaKnown RBP11.65□□□□□ -0.54
TNFAIP3-210ENST00000620204 DCTPP1Q9H773 170 aa11.65□□□□□ -0.54
TNFAIP3-210ENST00000620204 SMTNL1A8MU46 457 aa11.64□□□□□ -0.55
TNFAIP3-210ENST00000620204 HMMRO75330 724 aa11.64□□□□□ -0.55
TNFAIP3-210ENST00000620204 PTPN14Q15678 1187 aa11.64□□□□□ -0.55
TNFAIP3-210ENST00000620204 ANKRD7Q92527 254 aa11.64□□□□□ -0.55
TNFAIP3-210ENST00000620204 KIF1BO60333 1816 aa11.64□□□□□ -0.55
TNFAIP3-210ENST00000620204 CPA1P15085 419 aa11.64□□□□□ -0.55
TNFAIP3-210ENST00000620204 TFIP11Q9UBB9 837 aaKnown RBP11.64□□□□□ -0.55
TNFAIP3-210ENST00000620204 DDX41Q9UJV9 622 aaKnown RBP11.64□□□□□ -0.55
TNFAIP3-210ENST00000620204 AP5Z1O43299 807 aa11.64□□□□□ -0.55
TNFAIP3-210ENST00000620204 CCDC83Q8IWF9 413 aa11.64□□□□□ -0.55
TNFAIP3-210ENST00000620204 C8orf58Q8NAV2 365 aa11.64□□□□□ -0.55
TNFAIP3-210ENST00000620204 BICD2Q8TD16 824 aa11.64□□□□□ -0.55
TNFAIP3-210ENST00000620204 TNMDQ9H2S6 317 aa11.64□□□□□ -0.55
TNFAIP3-210ENST00000620204 CLIP2Q9UDT6 1046 aa11.64□□□□□ -0.55
TNFAIP3-210ENST00000620204 RICTORQ6R327 1708 aa11.64□□□□□ -0.55
TNFAIP3-210ENST00000620204 TNRQ92752 1358 aa11.63□□□□□ -0.55
TNFAIP3-210ENST00000620204 ABCC11Q96J66 1382 aa11.63□□□□□ -0.55
TNFAIP3-210ENST00000620204 FAM83GA6ND36 823 aa11.63□□□□□ -0.55
TNFAIP3-210ENST00000620204 STX6O43752 255 aa11.63□□□□□ -0.55
TNFAIP3-210ENST00000620204 NECTIN2Q92692 538 aa11.63□□□□□ -0.55
TNFAIP3-210ENST00000620204 GLI2P10070 1586 aa11.63□□□□□ -0.55
TNFAIP3-210ENST00000620204 HTATSF1O43719 755 aaKnown RBP11.63□□□□□ -0.55
TNFAIP3-210ENST00000620204 KIF18AQ8NI77 898 aa11.63□□□□□ -0.55
TNFAIP3-210ENST00000620204 MEIS3Q99687 375 aa11.63□□□□□ -0.55
TNFAIP3-210ENST00000620204 EIF2AK4Q9P2K8 1649 aaKnown RBP11.63□□□□□ -0.55
TNFAIP3-210ENST00000620204 BECN2A8MW95 431 aa11.63□□□□□ -0.55
TNFAIP3-210ENST00000620204 CEBPZQ03701 1054 aaKnown RBP11.63□□□□□ -0.55
TNFAIP3-210ENST00000620204 CDK19Q9BWU1 502 aa11.63□□□□□ -0.55
TNFAIP3-210ENST00000620204 NUP62CLQ9H1M0 184 aa11.63□□□□□ -0.55
TNFAIP3-210ENST00000620204 GNAI1P63096 354 aa11.62□□□□□ -0.55
TNFAIP3-210ENST00000620204 MAP3K11Q16584 847 aa11.62□□□□□ -0.55
TNFAIP3-210ENST00000620204 SKIDA1Q1XH10 827 aa11.62□□□□□ -0.55
TNFAIP3-210ENST00000620204 HOMER1Q86YM7 354 aa11.62□□□□□ -0.55
TNFAIP3-210ENST00000620204 IL1RAPL2Q9NP60 686 aa11.62□□□□□ -0.55
TNFAIP3-210ENST00000620204 CABP1Q9NZU7 370 aa11.62□□□□□ -0.55
TNFAIP3-210ENST00000620204 ZSCAN22P10073 491 aaPredicted RBP11.62□□□□□ -0.55
TNFAIP3-210ENST00000620204 ANO6Q4KMQ2 910 aa11.62□□□□□ -0.55
TNFAIP3-210ENST00000620204 C10orf67Q8IYJ2 551 aa11.62□□□□□ -0.55
TNFAIP3-210ENST00000620204 NCKAP5LQ9HCH0 1330 aa11.62□□□□□ -0.55
TNFAIP3-210ENST00000620204 SYT1P21579 422 aa11.62□□□□□ -0.55
TNFAIP3-210ENST00000620204 GNL2Q13823 731 aaKnown RBP11.62□□□□□ -0.55
TNFAIP3-210ENST00000620204 ZNF397Q8NF99 534 aaPredicted RBP11.62□□□□□ -0.55
TNFAIP3-210ENST00000620204 CHMP4CQ96CF2 233 aa11.62□□□□□ -0.55
TNFAIP3-210ENST00000620204 DNAJC5Q9H3Z4 198 aa11.62□□□□□ -0.55
TNFAIP3-210ENST00000620204 F6X3S4 739 aa11.61□□□□□ -0.55
TNFAIP3-210ENST00000620204 FOSBP53539 338 aa11.61□□□□□ -0.55
TNFAIP3-210ENST00000620204 CCAR2Q8N163 923 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms