RNA–Protein interactions for RNA: ENST00000619151.4

BRF1-221, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5 BASIC

Gene BRF1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-221ENST00000619151 B4GALNT3Q6L9W6 998 aa35.67■■■■□ 3.3
BRF1-221ENST00000619151 MEGF6O75095 1541 aa35.67■■■■□ 3.3
BRF1-221ENST00000619151 ONECUT3O60422 494 aaPredicted RBP35.66■■■■□ 3.3
BRF1-221ENST00000619151 TSPYL6Q8N831 410 aa35.66■■■■□ 3.3
BRF1-221ENST00000619151 C8orf58Q8NAV2 365 aa35.66■■■■□ 3.3
BRF1-221ENST00000619151 IPO8O15397 1037 aaKnown RBP35.65■■■■□ 3.3
BRF1-221ENST00000619151 RBM6P78332 1123 aaKnown RBP35.63■■■■□ 3.29
BRF1-221ENST00000619151 PARP4Q9UKK3 1724 aaKnown RBP35.63■■■■□ 3.29
BRF1-221ENST00000619151 PKD1L3Q7Z443 1732 aa35.63■■■■□ 3.29
BRF1-221ENST00000619151 FAM98CQ17RN3 349 aaKnown RBP35.62■■■■□ 3.29
BRF1-221ENST00000619151 WNK3Q9BYP7 1800 aa35.61■■■■□ 3.29
BRF1-221ENST00000619151 ELL2O00472 640 aaPredicted RBP35.61■■■■□ 3.29
BRF1-221ENST00000619151 RNMTO43148 476 aaKnown RBP35.61■■■■□ 3.29
BRF1-221ENST00000619151 TEFQ10587 303 aa35.61■■■■□ 3.29
BRF1-221ENST00000619151 SOS1Q07889 1333 aaPredicted RBP35.61■■■■□ 3.29
BRF1-221ENST00000619151 POTEAQ6S8J7 498 aa35.6■■■■□ 3.29
BRF1-221ENST00000619151 FTSJ3Q8IY81 847 aaKnown RBP35.59■■■■□ 3.29
BRF1-221ENST00000619151 MIS18AQ9NYP9 233 aa35.58■■■■□ 3.29
BRF1-221ENST00000619151 ADAMTS7Q9UKP4 1686 aa35.58■■■■□ 3.29
BRF1-221ENST00000619151 ATF7IPQ6VMQ6 1270 aa35.57■■■■□ 3.29
BRF1-221ENST00000619151 MPRIPQ6WCQ1 1025 aa35.57■■■■□ 3.29
BRF1-221ENST00000619151 MRPL50Q8N5N7 158 aaKnown RBP35.57■■■■□ 3.29
BRF1-221ENST00000619151 LGR6Q9HBX8 967 aa35.57■■■■□ 3.29
BRF1-221ENST00000619151 NOB1Q9ULX3 412 aaKnown RBP35.57■■■■□ 3.29
BRF1-221ENST00000619151 RXRBP28702 533 aa35.57■■■■□ 3.28
BRF1-221ENST00000619151 AAMPQ13685 434 aa35.57■■■■□ 3.28
BRF1-221ENST00000619151 DZIP1LQ8IYY4 767 aaKnown RBP35.57■■■■□ 3.28
BRF1-221ENST00000619151 IFNL2Q8IZJ0 200 aa35.57■■■■□ 3.28
BRF1-221ENST00000619151 VIRMAQ69YN4 1812 aaKnown RBP35.57■■■■□ 3.28
BRF1-221ENST00000619151 ZCRB1Q8TBF4 217 aaKnown RBP35.56■■■■□ 3.28
BRF1-221ENST00000619151 PANK1Q8TE04 598 aa35.56■■■■□ 3.28
BRF1-221ENST00000619151 THSD7AQ9UPZ6 1657 aa35.55■■■■□ 3.28
BRF1-221ENST00000619151 HSP90AB1P08238 724 aaKnown RBP35.55■■■■□ 3.28
BRF1-221ENST00000619151 EXOC5O00471 708 aa35.54■■■■□ 3.28
BRF1-221ENST00000619151 PHKG2P15735 406 aa35.54■■■■□ 3.28
BRF1-221ENST00000619151 ARHGAP45Q92619 1136 aa35.54■■■■□ 3.28
BRF1-221ENST00000619151 COG6Q9Y2V7 657 aa35.52■■■■□ 3.28
BRF1-221ENST00000619151 TRIM27P14373 513 aa35.52■■■■□ 3.28
BRF1-221ENST00000619151 DDB1Q16531 1140 aa35.52■■■■□ 3.28
BRF1-221ENST00000619151 KDM3BQ7LBC6 1761 aa35.51■■■■□ 3.28
BRF1-221ENST00000619151 KRT24Q2M2I5 525 aa35.51■■■■□ 3.27
BRF1-221ENST00000619151 TNS2Q63HR2 1409 aa35.5■■■■□ 3.27
BRF1-221ENST00000619151 SCN11AQ9UI33 1791 aa35.49■■■■□ 3.27
BRF1-221ENST00000619151 SEPT12Q8IYM1 358 aa35.49■■■■□ 3.27
BRF1-221ENST00000619151 PCDH11XQ9BZA7 1347 aa35.49■■■■□ 3.27
BRF1-221ENST00000619151 PCDH11YQ9BZA8 1340 aa35.49■■■■□ 3.27
BRF1-221ENST00000619151 BTBD11A6QL63 1104 aa35.48■■■■□ 3.27
BRF1-221ENST00000619151 CLUAP1Q96AJ1 413 aa35.48■■■■□ 3.27
BRF1-221ENST00000619151 CHMP4AQ9BY43 222 aa35.48■■■■□ 3.27
BRF1-221ENST00000619151 RLBP1P12271 317 aa35.47■■■■□ 3.27
BRF1-221ENST00000619151 MVPQ14764 893 aaKnown RBP35.47■■■■□ 3.27
BRF1-221ENST00000619151 CYP27B1O15528 508 aa35.47■■■■□ 3.27
BRF1-221ENST00000619151 DCAF5Q96JK2 942 aa35.47■■■■□ 3.27
BRF1-221ENST00000619151 SIPA1L3O60292 1781 aaPredicted RBP35.46■■■■□ 3.27
BRF1-221ENST00000619151 KDM6AO15550 1401 aaPredicted RBP35.45■■■■□ 3.27
BRF1-221ENST00000619151 API5Q9BZZ5 524 aaKnown RBP35.45■■■■□ 3.27
BRF1-221ENST00000619151 TNNQ9UQP3 1299 aa35.45■■■■□ 3.27
BRF1-221ENST00000619151 SHANK3Q9BYB0 1731 aa35.45■■■■□ 3.26
BRF1-221ENST00000619151 A0A0G2JS52 829 aa35.44■■■■□ 3.26
BRF1-221ENST00000619151 MYT1Q01538 1121 aa35.44■■■■□ 3.26
BRF1-221ENST00000619151 HOXB7P09629 217 aa35.43■■■■□ 3.26
BRF1-221ENST00000619151 CCDC30Q5VVM6 783 aa35.42■■■■□ 3.26
BRF1-221ENST00000619151 MRC1P22897 1456 aa35.42■■■■□ 3.26
BRF1-221ENST00000619151 TCERG1O14776 1098 aaKnown RBP35.42■■■■□ 3.26
BRF1-221ENST00000619151 STK31Q9BXU1 1019 aa35.42■■■■□ 3.26
BRF1-221ENST00000619151 DDX19BQ9UMR2 479 aa35.42■■■■□ 3.26
BRF1-221ENST00000619151 EIF4A1P60842 406 aaKnown RBP35.41■■■■□ 3.26
BRF1-221ENST00000619151 DDX54Q8TDD1 881 aaKnown RBP35.41■■■■□ 3.26
BRF1-221ENST00000619151 SLC52A2Q9HAB3 445 aa35.41■■■■□ 3.26
BRF1-221ENST00000619151 NKX1-1Q15270 411 aaPredicted RBP35.4■■■■□ 3.26
BRF1-221ENST00000619151 PTPRCP08575 1304 aa35.39■■■■□ 3.26
BRF1-221ENST00000619151 MARCH10Q8NA82 808 aaPredicted RBP35.39■■■■□ 3.26
BRF1-221ENST00000619151 ITPRIPQ8IWB1 547 aa35.38■■■■□ 3.25
BRF1-221ENST00000619151 CHMP4BQ9H444 224 aaKnown RBP35.37■■■■□ 3.25
BRF1-221ENST00000619151 RGS12O14924 1447 aa35.36■■■■□ 3.25
BRF1-221ENST00000619151 TMEM57Q8N5G2 664 aa35.36■■■■□ 3.25
BRF1-221ENST00000619151 ABCC4O15439 1325 aa35.35■■■■□ 3.25
BRF1-221ENST00000619151 CACNA1FO60840 1977 aa35.35■■■■□ 3.25
BRF1-221ENST00000619151 SLC4A2P04920 1241 aa35.34■■■■□ 3.25
BRF1-221ENST00000619151 KRT27Q7Z3Y8 459 aa35.32■■■■□ 3.25
BRF1-221ENST00000619151 HDGFL1Q5TGJ6 251 aa35.32■■■■□ 3.24
BRF1-221ENST00000619151 CENPQQ7L2Z9 268 aaPredicted RBP35.32■■■■□ 3.24
BRF1-221ENST00000619151 BRWD3Q6RI45 1802 aa35.3■■■■□ 3.24
BRF1-221ENST00000619151 CABP4P57796 275 aa35.3■■■■□ 3.24
BRF1-221ENST00000619151 BCL9O00512 1426 aa35.29■■■■□ 3.24
BRF1-221ENST00000619151 KCNQ3O43525 872 aa35.29■■■■□ 3.24
BRF1-221ENST00000619151 ERVV-2B6SEH9 535 aa35.28■■■■□ 3.24
BRF1-221ENST00000619151 NFATC2IPQ8NCF5 419 aa35.28■■■■□ 3.24
BRF1-221ENST00000619151 HEG1Q9ULI3 1381 aa35.27■■■■□ 3.24
BRF1-221ENST00000619151 ZNF790Q6PG37 636 aa35.27■■■■□ 3.24
BRF1-221ENST00000619151 KDM2BQ8NHM5 1336 aa35.26■■■■□ 3.24
BRF1-221ENST00000619151 TTC5Q8N0Z6 440 aa35.25■■■■□ 3.23
BRF1-221ENST00000619151 GIGYF1O75420 1035 aaPredicted RBP35.22■■■■□ 3.23
BRF1-221ENST00000619151 EIF2S2P20042 333 aaKnown RBP35.21■■■■□ 3.23
BRF1-221ENST00000619151 FLIIQ13045 1269 aa35.21■■■■□ 3.23
BRF1-221ENST00000619151 NECTIN2Q92692 538 aa35.21■■■■□ 3.23
BRF1-221ENST00000619151 FAM182BQ5T319 152 aa35.2■■■■□ 3.23
BRF1-221ENST00000619151 INTS3Q68E01 1043 aaKnown RBP35.2■■■■□ 3.23
BRF1-221ENST00000619151 FAM196AQ6ZSG2 479 aa35.2■■■■□ 3.23
BRF1-221ENST00000619151 ZBTB40Q9NUA8 1239 aa35.19■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms