RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 GAS2L3Q86XJ1 694 aa23.73■■□□□ 1.39
PCDHGB3-202ENST00000618934 SETD1BQ9UPS6 1966 aaKnown RBP23.73■■□□□ 1.39
PCDHGB3-202ENST00000618934 C14orf37Q86TY3 774 aa23.72■■□□□ 1.39
PCDHGB3-202ENST00000618934 OSBPL3Q9H4L5 887 aa23.72■■□□□ 1.39
PCDHGB3-202ENST00000618934 FAM208AQ9UK61 1670 aaKnown RBP23.72■■□□□ 1.39
PCDHGB3-202ENST00000618934 PKP1Q13835 747 aa23.72■■□□□ 1.39
PCDHGB3-202ENST00000618934 SALL3Q9BXA9 1300 aa23.71■■□□□ 1.39
PCDHGB3-202ENST00000618934 MAP3K5Q99683 1374 aa23.71■■□□□ 1.39
PCDHGB3-202ENST00000618934 FER1L4A9Z1Z3 1794 aa23.7■■□□□ 1.38
PCDHGB3-202ENST00000618934 TAF7Q15545 349 aaPredicted RBP23.7■■□□□ 1.38
PCDHGB3-202ENST00000618934 LRRFIP2Q9Y608 721 aaKnown RBP23.7■■□□□ 1.38
PCDHGB3-202ENST00000618934 CASC1Q6TDU7 716 aa23.7■■□□□ 1.38
PCDHGB3-202ENST00000618934 PHAXQ9H814 394 aaKnown RBP23.7■■□□□ 1.38
PCDHGB3-202ENST00000618934 ERC2O15083 957 aa23.69■■□□□ 1.38
PCDHGB3-202ENST00000618934 ATP8B2P98198 1209 aa23.69■■□□□ 1.38
PCDHGB3-202ENST00000618934 GRPEL1Q9HAV7 217 aa23.69■■□□□ 1.38
PCDHGB3-202ENST00000618934 BAG4O95429 457 aaKnown RBP23.69■■□□□ 1.38
PCDHGB3-202ENST00000618934 ANKARQ7Z5J8 1434 aa23.69■■□□□ 1.38
PCDHGB3-202ENST00000618934 ZGPATQ8N5A5 531 aaKnown RBP23.69■■□□□ 1.38
PCDHGB3-202ENST00000618934 USP44Q9H0E7 712 aa23.69■■□□□ 1.38
PCDHGB3-202ENST00000618934 MRE11P49959 708 aa23.68■■□□□ 1.38
PCDHGB3-202ENST00000618934 LRRCC1Q9C099 1032 aa23.68■■□□□ 1.38
PCDHGB3-202ENST00000618934 GNAI3P08754 354 aa23.67■■□□□ 1.38
PCDHGB3-202ENST00000618934 REC8O95072 547 aa23.66■■□□□ 1.38
PCDHGB3-202ENST00000618934 CLEC17AQ6ZS10 378 aa23.66■■□□□ 1.38
PCDHGB3-202ENST00000618934 LGR6Q9HBX8 967 aa23.66■■□□□ 1.38
PCDHGB3-202ENST00000618934 TUBGCP6Q96RT7 1819 aa23.65■■□□□ 1.38
PCDHGB3-202ENST00000618934 EIF5BO60841 1220 aaKnown RBP23.65■■□□□ 1.38
PCDHGB3-202ENST00000618934 NBPF6Q5VWK0 638 aa23.65■■□□□ 1.38
PCDHGB3-202ENST00000618934 NBPF4Q96M43 638 aa23.65■■□□□ 1.38
PCDHGB3-202ENST00000618934 IBTKQ9P2D0 1353 aaPredicted RBP23.65■■□□□ 1.38
PCDHGB3-202ENST00000618934 MX1P20591 662 aa23.64■■□□□ 1.38
PCDHGB3-202ENST00000618934 UNC5CLQ8IV45 518 aa23.64■■□□□ 1.38
PCDHGB3-202ENST00000618934 CYP2E1P05181 493 aaPredicted RBP23.64■■□□□ 1.37
PCDHGB3-202ENST00000618934 HDGFL1Q5TGJ6 251 aa23.64■■□□□ 1.37
PCDHGB3-202ENST00000618934 PHF8Q9UPP1 1060 aa23.64■■□□□ 1.37
PCDHGB3-202ENST00000618934 CACNA1FO60840 1977 aa23.64■■□□□ 1.37
PCDHGB3-202ENST00000618934 KCNQ3O43525 872 aa23.63■■□□□ 1.37
PCDHGB3-202ENST00000618934 ZBTB7CA1YPR0 619 aa23.63■■□□□ 1.37
PCDHGB3-202ENST00000618934 EIF2S2P20042 333 aaKnown RBP23.63■■□□□ 1.37
PCDHGB3-202ENST00000618934 SKOR2Q2VWA4 1001 aaPredicted RBP23.63■■□□□ 1.37
PCDHGB3-202ENST00000618934 LTN1O94822 1766 aa23.62■■□□□ 1.37
PCDHGB3-202ENST00000618934 ESYT1Q9BSJ8 1104 aa23.62■■□□□ 1.37
PCDHGB3-202ENST00000618934 IL1RAPL2Q9NP60 686 aa23.62■■□□□ 1.37
PCDHGB3-202ENST00000618934 RILPL2Q969X0 211 aa23.62■■□□□ 1.37
PCDHGB3-202ENST00000618934 CHAMP1Q96JM3 812 aa23.62■■□□□ 1.37
PCDHGB3-202ENST00000618934 PALD1Q9ULE6 856 aa23.62■■□□□ 1.37
PCDHGB3-202ENST00000618934 ST18O60284 1047 aa23.61■■□□□ 1.37
PCDHGB3-202ENST00000618934 ZDHHC9Q9Y397 364 aa23.61■■□□□ 1.37
PCDHGB3-202ENST00000618934 PLEKHG5O94827 1062 aa23.61■■□□□ 1.37
PCDHGB3-202ENST00000618934 MCTP1Q6DN14 999 aa23.61■■□□□ 1.37
PCDHGB3-202ENST00000618934 USP54Q70EL1 1684 aa23.6■■□□□ 1.37
PCDHGB3-202ENST00000618934 TRIM6-TRIM34B2RNG4 842 aa23.6■■□□□ 1.37
PCDHGB3-202ENST00000618934 IP6K1Q92551 441 aa23.6■■□□□ 1.37
PCDHGB3-202ENST00000618934 UBTFL1P0CB47 393 aaPredicted RBP23.6■■□□□ 1.37
PCDHGB3-202ENST00000618934 CHMLP26374 656 aa23.6■■□□□ 1.37
PCDHGB3-202ENST00000618934 ANXA1P04083 346 aa23.59■■□□□ 1.37
PCDHGB3-202ENST00000618934 LRRC59Q96AG4 307 aaKnown RBP23.59■■□□□ 1.37
PCDHGB3-202ENST00000618934 IL25Q9H293 177 aa23.59■■□□□ 1.37
PCDHGB3-202ENST00000618934 CEMIPQ8WUJ3 1361 aa23.59■■□□□ 1.37
PCDHGB3-202ENST00000618934 NEK4P51957 841 aa23.59■■□□□ 1.37
PCDHGB3-202ENST00000618934 DDX49Q9Y6V7 483 aaKnown RBP23.59■■□□□ 1.37
PCDHGB3-202ENST00000618934 RGPD2P0DJD1 1756 aa23.58■■□□□ 1.37
PCDHGB3-202ENST00000618934 EIF4A1P60842 406 aaKnown RBP23.58■■□□□ 1.37
PCDHGB3-202ENST00000618934 NUTM1Q86Y26 1132 aa23.58■■□□□ 1.37
PCDHGB3-202ENST00000618934 BABAM1Q9NWV8 329 aa23.58■■□□□ 1.37
PCDHGB3-202ENST00000618934 STAP2Q9UGK3 403 aa23.58■■□□□ 1.37
PCDHGB3-202ENST00000618934 NUCB2P80303 420 aa23.58■■□□□ 1.36
PCDHGB3-202ENST00000618934 PPP1R42Q7Z4L9 355 aa23.57■■□□□ 1.36
PCDHGB3-202ENST00000618934 NBPF7P0C2Y1 421 aaPredicted RBP23.57■■□□□ 1.36
PCDHGB3-202ENST00000618934 SSH3Q8TE77 659 aa23.57■■□□□ 1.36
PCDHGB3-202ENST00000618934 CHPF2Q9P2E5 772 aa23.57■■□□□ 1.36
PCDHGB3-202ENST00000618934 N4BP2Q86UW6 1770 aaPredicted RBP23.56■■□□□ 1.36
PCDHGB3-202ENST00000618934 GOLGA6L22H0YM25 854 aa23.56■■□□□ 1.36
PCDHGB3-202ENST00000618934 LMBRD1Q9NUN5 540 aa23.56■■□□□ 1.36
PCDHGB3-202ENST00000618934 MAP4K4O95819 1239 aaPredicted RBP23.55■■□□□ 1.36
PCDHGB3-202ENST00000618934 PRKCSHP14314 528 aaPredicted RBP23.55■■□□□ 1.36
PCDHGB3-202ENST00000618934 PTMSP20962 102 aa23.55■■□□□ 1.36
PCDHGB3-202ENST00000618934 KLHL40Q2TBA0 621 aa23.55■■□□□ 1.36
PCDHGB3-202ENST00000618934 NFAT5O94916 1531 aa23.55■■□□□ 1.36
PCDHGB3-202ENST00000618934 SOS1Q07889 1333 aaPredicted RBP23.55■■□□□ 1.36
PCDHGB3-202ENST00000618934 ESCO1Q5FWF5 840 aa23.55■■□□□ 1.36
PCDHGB3-202ENST00000618934 ANO2Q9NQ90 1003 aa23.55■■□□□ 1.36
PCDHGB3-202ENST00000618934 ISY1Q9ULR0 285 aaKnown RBP23.55■■□□□ 1.36
PCDHGB3-202ENST00000618934 TMX3Q96JJ7 454 aa23.54■■□□□ 1.36
PCDHGB3-202ENST00000618934 CWC22Q9HCG8 908 aaKnown RBP23.54■■□□□ 1.36
PCDHGB3-202ENST00000618934 FOXD4L5Q5VV16 416 aaPredicted RBP23.54■■□□□ 1.36
PCDHGB3-202ENST00000618934 FOXD4L4Q8WXT5 416 aaPredicted RBP23.54■■□□□ 1.36
PCDHGB3-202ENST00000618934 SRCIN1Q9C0H9 1055 aa23.54■■□□□ 1.36
PCDHGB3-202ENST00000618934 PXDNLA1KZ92 1463 aa23.54■■□□□ 1.36
PCDHGB3-202ENST00000618934 SURF6O75683 361 aaKnown RBP23.53■■□□□ 1.36
PCDHGB3-202ENST00000618934 XPCQ01831 940 aaPredicted RBP23.53■■□□□ 1.36
PCDHGB3-202ENST00000618934 MPRIPQ6WCQ1 1025 aa23.53■■□□□ 1.36
PCDHGB3-202ENST00000618934 NOL8Q76FK4 1167 aaKnown RBP23.53■■□□□ 1.36
PCDHGB3-202ENST00000618934 PI4KAP2A4QPH2 592 aa23.53■■□□□ 1.36
PCDHGB3-202ENST00000618934 PSME1Q06323 249 aa23.53■■□□□ 1.36
PCDHGB3-202ENST00000618934 PI4KAP1Q8N8J0 262 aa23.53■■□□□ 1.36
PCDHGB3-202ENST00000618934 CHD2O14647 1828 aaKnown RBP23.52■■□□□ 1.36
PCDHGB3-202ENST00000618934 POLA2Q14181 598 aa23.52■■□□□ 1.36
PCDHGB3-202ENST00000618934 BEND3Q5T5X7 828 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms