RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 TATP17735 454 aaPredicted RBP31.97■■■□□ 2.71
VEGFC-202ENST00000618562 TEFQ10587 303 aa31.96■■■□□ 2.71
VEGFC-202ENST00000618562 DAXXQ9UER7 740 aaPredicted RBP31.96■■■□□ 2.71
VEGFC-202ENST00000618562 SOS1Q07889 1333 aaPredicted RBP31.96■■■□□ 2.71
VEGFC-202ENST00000618562 SLC4A2P04920 1241 aa31.96■■■□□ 2.71
VEGFC-202ENST00000618562 SIPA1L3O60292 1781 aaPredicted RBP31.96■■■□□ 2.71
VEGFC-202ENST00000618562 COL5A2P05997 1499 aaPredicted RBP31.95■■■□□ 2.71
VEGFC-202ENST00000618562 PDZRN3Q9UPQ7 1066 aa31.95■■■□□ 2.71
VEGFC-202ENST00000618562 PLEKHG2Q9H7P9 1386 aa31.95■■■□□ 2.7
VEGFC-202ENST00000618562 PKD1L3Q7Z443 1732 aa31.94■■■□□ 2.7
VEGFC-202ENST00000618562 WDR17Q8IZU2 1322 aa31.94■■■□□ 2.7
VEGFC-202ENST00000618562 AHDC1Q5TGY3 1603 aaPredicted RBP31.94■■■□□ 2.7
VEGFC-202ENST00000618562 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.94■■■□□ 2.7
VEGFC-202ENST00000618562 PTPRCP08575 1304 aa31.93■■■□□ 2.7
VEGFC-202ENST00000618562 ZBTB7BO15156 539 aaPredicted RBP31.93■■■□□ 2.7
VEGFC-202ENST00000618562 SCN11AQ9UI33 1791 aa31.92■■■□□ 2.7
VEGFC-202ENST00000618562 HDAC1Q13547 482 aaPredicted RBP31.91■■■□□ 2.7
VEGFC-202ENST00000618562 SPG7Q9UQ90 795 aa31.91■■■□□ 2.7
VEGFC-202ENST00000618562 CACNA1FO60840 1977 aa31.91■■■□□ 2.7
VEGFC-202ENST00000618562 EIF4A1P60842 406 aaKnown RBP31.91■■■□□ 2.7
VEGFC-202ENST00000618562 BTBD11A6QL63 1104 aa31.9■■■□□ 2.7
VEGFC-202ENST00000618562 KCNQ3O43525 872 aa31.9■■■□□ 2.7
VEGFC-202ENST00000618562 CCDC30Q5VVM6 783 aa31.9■■■□□ 2.7
VEGFC-202ENST00000618562 G2E3Q7L622 706 aa31.9■■■□□ 2.7
VEGFC-202ENST00000618562 KDM6AO15550 1401 aaPredicted RBP31.89■■■□□ 2.7
VEGFC-202ENST00000618562 PHKG2P15735 406 aa31.88■■■□□ 2.69
VEGFC-202ENST00000618562 STK31Q9BXU1 1019 aa31.88■■■□□ 2.69
VEGFC-202ENST00000618562 INTS3Q68E01 1043 aaKnown RBP31.88■■■□□ 2.69
VEGFC-202ENST00000618562 CHMP4BQ9H444 224 aaKnown RBP31.87■■■□□ 2.69
VEGFC-202ENST00000618562 TOM1L2Q6ZVM7 507 aa31.87■■■□□ 2.69
VEGFC-202ENST00000618562 PARP4Q9UKK3 1724 aaKnown RBP31.86■■■□□ 2.69
VEGFC-202ENST00000618562 NECTIN2Q92692 538 aa31.86■■■□□ 2.69
VEGFC-202ENST00000618562 IFNL2Q8IZJ0 200 aa31.84■■■□□ 2.69
VEGFC-202ENST00000618562 COL22A1Q8NFW1 1626 aaPredicted RBP31.84■■■□□ 2.69
VEGFC-202ENST00000618562 CYP27B1O15528 508 aa31.84■■■□□ 2.69
VEGFC-202ENST00000618562 HOXB7P09629 217 aa31.82■■■□□ 2.68
VEGFC-202ENST00000618562 HDGFL1Q5TGJ6 251 aa31.82■■■□□ 2.68
VEGFC-202ENST00000618562 SLC4A3P48751 1232 aa31.8■■■□□ 2.68
VEGFC-202ENST00000618562 CARD10Q9BWT7 1032 aa31.8■■■□□ 2.68
VEGFC-202ENST00000618562 SEC24BO95487 1268 aa31.8■■■□□ 2.68
VEGFC-202ENST00000618562 FLIIQ13045 1269 aa31.8■■■□□ 2.68
VEGFC-202ENST00000618562 LARP1Q6PKG0 1096 aaKnown RBP31.8■■■□□ 2.68
VEGFC-202ENST00000618562 C1orf115Q9H7X2 142 aa31.8■■■□□ 2.68
VEGFC-202ENST00000618562 STRN4Q9NRL3 753 aa31.8■■■□□ 2.68
VEGFC-202ENST00000618562 HEG1Q9ULI3 1381 aa31.79■■■□□ 2.68
VEGFC-202ENST00000618562 SMC5Q8IY18 1101 aa31.79■■■□□ 2.68
VEGFC-202ENST00000618562 SLC52A2Q9HAB3 445 aa31.79■■■□□ 2.68
VEGFC-202ENST00000618562 F6X3S4 739 aa31.77■■■□□ 2.68
VEGFC-202ENST00000618562 UPF2Q9HAU5 1272 aaKnown RBP31.77■■■□□ 2.68
VEGFC-202ENST00000618562 MRC1P22897 1456 aa31.77■■■□□ 2.68
VEGFC-202ENST00000618562 DCAF5Q96JK2 942 aa31.77■■■□□ 2.68
VEGFC-202ENST00000618562 EVA1CP58658 441 aa31.76■■■□□ 2.68
VEGFC-202ENST00000618562 PHLPP1O60346 1717 aa31.76■■■□□ 2.67
VEGFC-202ENST00000618562 EIF2S2P20042 333 aaKnown RBP31.76■■■□□ 2.67
VEGFC-202ENST00000618562 COL14A1Q05707 1796 aaKnown RBP31.75■■■□□ 2.67
VEGFC-202ENST00000618562 COL16A1Q07092 1604 aaPredicted RBP31.75■■■□□ 2.67
VEGFC-202ENST00000618562 FKBP5Q13451 457 aaPredicted RBP31.74■■■□□ 2.67
VEGFC-202ENST00000618562 GIGYF1O75420 1035 aaPredicted RBP31.73■■■□□ 2.67
VEGFC-202ENST00000618562 NFATC2IPQ8NCF5 419 aa31.73■■■□□ 2.67
VEGFC-202ENST00000618562 SHANK3Q9BYB0 1731 aa31.73■■■□□ 2.67
VEGFC-202ENST00000618562 HSP90AB1P08238 724 aaKnown RBP31.72■■■□□ 2.67
VEGFC-202ENST00000618562 IL2RBP14784 551 aa31.72■■■□□ 2.67
VEGFC-202ENST00000618562 ZCRB1Q8TBF4 217 aaKnown RBP31.72■■■□□ 2.67
VEGFC-202ENST00000618562 BTG4Q9NY30 223 aa31.72■■■□□ 2.67
VEGFC-202ENST00000618562 SLC4A10Q6U841 1118 aa31.72■■■□□ 2.67
VEGFC-202ENST00000618562 SIRT2Q8IXJ6 389 aa31.72■■■□□ 2.67
VEGFC-202ENST00000618562 N4BP2Q86UW6 1770 aaPredicted RBP31.72■■■□□ 2.67
VEGFC-202ENST00000618562 CHMP4AQ9BY43 222 aa31.71■■■□□ 2.67
VEGFC-202ENST00000618562 CHPF2Q9P2E5 772 aa31.71■■■□□ 2.67
VEGFC-202ENST00000618562 PCDH11XQ9BZA7 1347 aa31.71■■■□□ 2.67
VEGFC-202ENST00000618562 PCDH11YQ9BZA8 1340 aa31.71■■■□□ 2.67
VEGFC-202ENST00000618562 CCT4P50991 539 aaKnown RBP31.71■■■□□ 2.67
VEGFC-202ENST00000618562 ZNF790Q6PG37 636 aa31.71■■■□□ 2.67
VEGFC-202ENST00000618562 PHAXQ9H814 394 aaKnown RBP31.71■■■□□ 2.67
VEGFC-202ENST00000618562 BECN1Q14457 450 aa31.7■■■□□ 2.67
VEGFC-202ENST00000618562 TBC1D32Q96NH3 1257 aa31.7■■■□□ 2.67
VEGFC-202ENST00000618562 SLC39A6Q13433 755 aa31.69■■■□□ 2.66
VEGFC-202ENST00000618562 MEIS3Q99687 375 aa31.69■■■□□ 2.66
VEGFC-202ENST00000618562 PRAMEF22A3QJZ6 481 aa31.68■■■□□ 2.66
VEGFC-202ENST00000618562 NFKBIBQ15653 356 aa31.68■■■□□ 2.66
VEGFC-202ENST00000618562 ATP10DQ9P241 1426 aa31.67■■■□□ 2.66
VEGFC-202ENST00000618562 PXDNLA1KZ92 1463 aa31.67■■■□□ 2.66
VEGFC-202ENST00000618562 C5P01031 1676 aa31.66■■■□□ 2.66
VEGFC-202ENST00000618562 TOM1O60784 492 aa31.64■■■□□ 2.66
VEGFC-202ENST00000618562 NUCB1Q02818 461 aa31.64■■■□□ 2.66
VEGFC-202ENST00000618562 DBF4Q9UBU7 674 aaPredicted RBP31.63■■■□□ 2.65
VEGFC-202ENST00000618562 ANXA1P04083 346 aa31.63■■■□□ 2.65
VEGFC-202ENST00000618562 CABP4P57796 275 aa31.63■■■□□ 2.65
VEGFC-202ENST00000618562 BCL11AQ9H165 835 aa31.63■■■□□ 2.65
VEGFC-202ENST00000618562 PIP4K2BP78356 416 aa31.62■■■□□ 2.65
VEGFC-202ENST00000618562 NKX1-1Q15270 411 aaPredicted RBP31.61■■■□□ 2.65
VEGFC-202ENST00000618562 GCC1Q96CN9 775 aa31.61■■■□□ 2.65
VEGFC-202ENST00000618562 ANKRD44Q8N8A2 993 aa31.6■■■□□ 2.65
VEGFC-202ENST00000618562 ZNF496Q96IT1 587 aaPredicted RBP31.6■■■□□ 2.65
VEGFC-202ENST00000618562 PLCH1Q4KWH8 1693 aa31.59■■■□□ 2.65
VEGFC-202ENST00000618562 PROSER3Q2NL68 480 aa31.59■■■□□ 2.65
VEGFC-202ENST00000618562 CEP85Q6P2H3 762 aa31.59■■■□□ 2.65
VEGFC-202ENST00000618562 DDX54Q8TDD1 881 aaKnown RBP31.58■■■□□ 2.65
VEGFC-202ENST00000618562 RPAP2Q8IXW5 612 aaPredicted RBP31.58■■■□□ 2.65
VEGFC-202ENST00000618562 TTC5Q8N0Z6 440 aa31.57■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms