RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 KLHL40Q2TBA0 621 aa14.47□□□□□ -0.09
C11orf54-215ENST00000617482 LTV1Q96GA3 475 aaPredicted RBP14.47□□□□□ -0.09
C11orf54-215ENST00000617482 OSBPL3Q9H4L5 887 aa14.47□□□□□ -0.09
C11orf54-215ENST00000617482 CLCN1P35523 988 aa14.46□□□□□ -0.09
C11orf54-215ENST00000617482 TRIM44Q96DX7 344 aaPredicted RBP14.46□□□□□ -0.09
C11orf54-215ENST00000617482 IGSF1Q8N6C5 1336 aa14.46□□□□□ -0.09
C11orf54-215ENST00000617482 AK9Q5TCS8 1911 aa14.46□□□□□ -0.09
C11orf54-215ENST00000617482 CYP2E1P05181 493 aaPredicted RBP14.46□□□□□ -0.09
C11orf54-215ENST00000617482 CCDC30Q5VVM6 783 aa14.46□□□□□ -0.09
C11orf54-215ENST00000617482 LRRCC1Q9C099 1032 aa14.46□□□□□ -0.09
C11orf54-215ENST00000617482 CWC22Q9HCG8 908 aaKnown RBP14.46□□□□□ -0.09
C11orf54-215ENST00000617482 RIMS1Q86UR5 1692 aaKnown RBP14.46□□□□□ -0.1
C11orf54-215ENST00000617482 KDRP35968 1356 aa14.46□□□□□ -0.1
C11orf54-215ENST00000617482 GNAT3A8MTJ3 354 aa14.45□□□□□ -0.1
C11orf54-215ENST00000617482 NEK4P51957 841 aa14.45□□□□□ -0.1
C11orf54-215ENST00000617482 RILPL2Q969X0 211 aa14.45□□□□□ -0.1
C11orf54-215ENST00000617482 CEP170BQ9Y4F5 1589 aaPredicted RBP14.45□□□□□ -0.1
C11orf54-215ENST00000617482 ERBB4Q15303 1308 aa14.45□□□□□ -0.1
C11orf54-215ENST00000617482 RGPD1P0DJD0 1748 aa14.45□□□□□ -0.1
C11orf54-215ENST00000617482 FOXD4L5Q5VV16 416 aaPredicted RBP14.45□□□□□ -0.1
C11orf54-215ENST00000617482 CAVIN1Q6NZI2 390 aaKnown RBP14.45□□□□□ -0.1
C11orf54-215ENST00000617482 FOXD4L4Q8WXT5 416 aaPredicted RBP14.45□□□□□ -0.1
C11orf54-215ENST00000617482 CHAMP1Q96JM3 812 aa14.45□□□□□ -0.1
C11orf54-215ENST00000617482 LMBRD1Q9NUN5 540 aa14.45□□□□□ -0.1
C11orf54-215ENST00000617482 ESPNB1AK53 854 aa14.44□□□□□ -0.1
C11orf54-215ENST00000617482 TRIM6-TRIM34B2RNG4 842 aa14.44□□□□□ -0.1
C11orf54-215ENST00000617482 GNAI3P08754 354 aa14.44□□□□□ -0.1
C11orf54-215ENST00000617482 IL17REQ8NFR9 667 aa14.44□□□□□ -0.1
C11orf54-215ENST00000617482 PRPF40AO75400 957 aaKnown RBP14.44□□□□□ -0.1
C11orf54-215ENST00000617482 MX1P20591 662 aa14.44□□□□□ -0.1
C11orf54-215ENST00000617482 ATP8B2P98198 1209 aa14.44□□□□□ -0.1
C11orf54-215ENST00000617482 ZDHHC9Q9Y397 364 aa14.44□□□□□ -0.1
C11orf54-215ENST00000617482 LRRFIP2Q9Y608 721 aaKnown RBP14.44□□□□□ -0.1
C11orf54-215ENST00000617482 NASPP49321 788 aaPredicted RBP14.43□□□□□ -0.1
C11orf54-215ENST00000617482 TOPAZ1Q8N9V7 1692 aa14.43□□□□□ -0.1
C11orf54-215ENST00000617482 PDIA4P13667 645 aaKnown RBP14.43□□□□□ -0.1
C11orf54-215ENST00000617482 HOXC9P31274 260 aa14.43□□□□□ -0.1
C11orf54-215ENST00000617482 NAP1L5Q96NT1 182 aaPredicted RBP14.43□□□□□ -0.1
C11orf54-215ENST00000617482 ESYT1Q9BSJ8 1104 aa14.43□□□□□ -0.1
C11orf54-215ENST00000617482 RGPD8O14715 1765 aaPredicted RBP14.43□□□□□ -0.1
C11orf54-215ENST00000617482 NOL8Q76FK4 1167 aaKnown RBP14.42□□□□□ -0.1
C11orf54-215ENST00000617482 USHBP1Q8N6Y0 703 aa14.42□□□□□ -0.1
C11orf54-215ENST00000617482 SALL3Q9BXA9 1300 aa14.42□□□□□ -0.1
C11orf54-215ENST00000617482 NALCNQ8IZF0 1738 aa14.42□□□□□ -0.1
C11orf54-215ENST00000617482 HTATSF1O43719 755 aaKnown RBP14.42□□□□□ -0.1
C11orf54-215ENST00000617482 C14orf37Q86TY3 774 aa14.42□□□□□ -0.1
C11orf54-215ENST00000617482 TMX3Q96JJ7 454 aa14.42□□□□□ -0.1
C11orf54-215ENST00000617482 ANO2Q9NQ90 1003 aa14.42□□□□□ -0.1
C11orf54-215ENST00000617482 PALD1Q9ULE6 856 aa14.42□□□□□ -0.1
C11orf54-215ENST00000617482 TAF7Q15545 349 aaPredicted RBP14.41□□□□□ -0.1
C11orf54-215ENST00000617482 ZSCAN23Q3MJ62 389 aa14.41□□□□□ -0.1
C11orf54-215ENST00000617482 ABTB2Q8N961 1025 aa14.41□□□□□ -0.1
C11orf54-215ENST00000617482 USP44Q9H0E7 712 aa14.41□□□□□ -0.1
C11orf54-215ENST00000617482 IL1RAPL2Q9NP60 686 aa14.41□□□□□ -0.1
C11orf54-215ENST00000617482 TBX22Q9Y458 520 aa14.41□□□□□ -0.1
C11orf54-215ENST00000617482 CHMLP26374 656 aa14.41□□□□□ -0.1
C11orf54-215ENST00000617482 UNC5CLQ8IV45 518 aa14.41□□□□□ -0.1
C11orf54-215ENST00000617482 PHAXQ9H814 394 aaKnown RBP14.41□□□□□ -0.1
C11orf54-215ENST00000617482 IBTKQ9P2D0 1353 aaPredicted RBP14.4□□□□□ -0.1
C11orf54-215ENST00000617482 UBTFL1P0CB47 393 aaPredicted RBP14.4□□□□□ -0.1
C11orf54-215ENST00000617482 GPT2Q8TD30 523 aa14.4□□□□□ -0.1
C11orf54-215ENST00000617482 RBM33Q96EV2 1170 aaKnown RBP14.4□□□□□ -0.1
C11orf54-215ENST00000617482 RBM27Q9P2N5 1060 aaKnown RBP14.4□□□□□ -0.1
C11orf54-215ENST00000617482 EIF2S2P20042 333 aaKnown RBP14.39□□□□□ -0.11
C11orf54-215ENST00000617482 HDGFL1Q5TGJ6 251 aa14.39□□□□□ -0.11
C11orf54-215ENST00000617482 NUTM1Q86Y26 1132 aa14.39□□□□□ -0.11
C11orf54-215ENST00000617482 ANP32BQ92688 251 aaKnown RBP14.39□□□□□ -0.11
C11orf54-215ENST00000617482 NPM3O75607 178 aaKnown RBP14.38□□□□□ -0.11
C11orf54-215ENST00000617482 MAP4K4O95819 1239 aaPredicted RBP14.38□□□□□ -0.11
C11orf54-215ENST00000617482 MCCP23508 829 aa14.38□□□□□ -0.11
C11orf54-215ENST00000617482 ZNF445P59923 1031 aa14.38□□□□□ -0.11
C11orf54-215ENST00000617482 CCDC173Q0VFZ6 552 aa14.38□□□□□ -0.11
C11orf54-215ENST00000617482 MAP3K5Q99683 1374 aa14.38□□□□□ -0.11
C11orf54-215ENST00000617482 KCNA6P17658 529 aa14.37□□□□□ -0.11
C11orf54-215ENST00000617482 PPP4R3CPQ6ZMV5 832 aa14.37□□□□□ -0.11
C11orf54-215ENST00000617482 UPF3BQ9BZI7 483 aaKnown RBP14.37□□□□□ -0.11
C11orf54-215ENST00000617482 PRIM1P49642 420 aaKnown RBP14.37□□□□□ -0.11
C11orf54-215ENST00000617482 IL25Q9H293 177 aa14.37□□□□□ -0.11
C11orf54-215ENST00000617482 STAP2Q9UGK3 403 aa14.37□□□□□ -0.11
C11orf54-215ENST00000617482 SURF6O75683 361 aaKnown RBP14.36□□□□□ -0.11
C11orf54-215ENST00000617482 SRCIN1Q9C0H9 1055 aa14.36□□□□□ -0.11
C11orf54-215ENST00000617482 RBSNQ9H1K0 784 aa14.36□□□□□ -0.11
C11orf54-215ENST00000617482 NSFL1CQ9UNZ2 370 aaKnown RBP14.36□□□□□ -0.11
C11orf54-215ENST00000617482 PPP1R42Q7Z4L9 355 aa14.36□□□□□ -0.11
C11orf54-215ENST00000617482 PPP1R9BQ96SB3 815 aa14.36□□□□□ -0.11
C11orf54-215ENST00000617482 DIP2AQ14689 1571 aa14.36□□□□□ -0.11
C11orf54-215ENST00000617482 ZBTB7CA1YPR0 619 aa14.35□□□□□ -0.11
C11orf54-215ENST00000617482 MCM2P49736 904 aa14.35□□□□□ -0.11
C11orf54-215ENST00000617482 FMN2Q9NZ56 1722 aa14.35□□□□□ -0.11
C11orf54-215ENST00000617482 FOXD4L6Q3SYB3 417 aaPredicted RBP14.35□□□□□ -0.11
C11orf54-215ENST00000617482 FOXD4L3Q6VB84 417 aaPredicted RBP14.35□□□□□ -0.11
C11orf54-215ENST00000617482 THEMISQ8N1K5 641 aaPredicted RBP14.35□□□□□ -0.11
C11orf54-215ENST00000617482 SSH3Q8TE77 659 aa14.35□□□□□ -0.11
C11orf54-215ENST00000617482 LGR6Q9HBX8 967 aa14.35□□□□□ -0.11
C11orf54-215ENST00000617482 PIK3C2AO00443 1686 aa14.34□□□□□ -0.11
C11orf54-215ENST00000617482 SOS1Q07889 1333 aaPredicted RBP14.34□□□□□ -0.11
C11orf54-215ENST00000617482 HOMEZQ8IX15 550 aa14.34□□□□□ -0.11
C11orf54-215ENST00000617482 TMEM63CQ9P1W3 806 aa14.34□□□□□ -0.11
C11orf54-215ENST00000617482 SRGAP3O43295 1099 aa14.34□□□□□ -0.11
C11orf54-215ENST00000617482 NBPF7P0C2Y1 421 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms