RNA–Protein interactions for RNA: ENST00000617293.4

SUSD3-205, Transcript of sushi domain containing 3, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SUSD3, Length 1,076 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-205ENST00000617293 RBM42Q9BTD8 480 aaKnown RBP25.06■■□□□ 1.6
SUSD3-205ENST00000617293 PDGFDQ9GZP0 370 aaPredicted RBP25.06■■□□□ 1.6
SUSD3-205ENST00000617293 PNNQ9H307 717 aaKnown RBP25.06■■□□□ 1.6
SUSD3-205ENST00000617293 ATP6V1AP38606 617 aa25.05■■□□□ 1.6
SUSD3-205ENST00000617293 IL17REQ8NFR9 667 aa25.05■■□□□ 1.6
SUSD3-205ENST00000617293 TFCP2L1Q9NZI6 479 aa25.05■■□□□ 1.6
SUSD3-205ENST00000617293 HMGB2P26583 209 aaKnown RBP25.04■■□□□ 1.6
SUSD3-205ENST00000617293 PLEKHF1Q96S99 279 aa25.04■■□□□ 1.6
SUSD3-205ENST00000617293 C5P01031 1676 aa25.03■■□□□ 1.6
SUSD3-205ENST00000617293 ANP32CO43423 234 aa25.02■■□□□ 1.6
SUSD3-205ENST00000617293 WDR43Q15061 677 aaKnown RBP eCLIP25.02■■□□□ 1.6
SUSD3-205ENST00000617293 RTF1Q92541 710 aaKnown RBP25.02■■□□□ 1.6
SUSD3-205ENST00000617293 TAF1LQ8IZX4 1826 aa25.02■■□□□ 1.6
SUSD3-205ENST00000617293 ADAMTS7Q9UKP4 1686 aa25.01■■□□□ 1.59
SUSD3-205ENST00000617293 PTCD1O75127 700 aaKnown RBP25.01■■□□□ 1.59
SUSD3-205ENST00000617293 TEFQ10587 303 aa25.01■■□□□ 1.59
SUSD3-205ENST00000617293 SRCAPQ6ZRS2 3230 aa25.01■■□□□ 1.59
SUSD3-205ENST00000617293 MAPK8IP3Q9UPT6 1336 aa25.01■■□□□ 1.59
SUSD3-205ENST00000617293 SLC39A6Q13433 755 aa25■■□□□ 1.59
SUSD3-205ENST00000617293 ITPK1Q13572 414 aa25■■□□□ 1.59
SUSD3-205ENST00000617293 MRC1P22897 1456 aa25■■□□□ 1.59
SUSD3-205ENST00000617293 LINC00116Q8NCU8 138 aa24.99■■□□□ 1.59
SUSD3-205ENST00000617293 SLC4A9Q96Q91 983 aa24.99■■□□□ 1.59
SUSD3-205ENST00000617293 CASZ1Q86V15 1759 aa24.98■■□□□ 1.59
SUSD3-205ENST00000617293 ZBTB7AO95365 584 aa24.98■■□□□ 1.59
SUSD3-205ENST00000617293 MCM10Q7L590 875 aa24.98■■□□□ 1.59
SUSD3-205ENST00000617293 PNPLA7Q6ZV29 1317 aa24.97■■□□□ 1.59
SUSD3-205ENST00000617293 AK7Q96M32 723 aa24.97■■□□□ 1.59
SUSD3-205ENST00000617293 SPON1Q9HCB6 807 aa24.97■■□□□ 1.59
SUSD3-205ENST00000617293 C4BP0C0L5 1744 aa24.96■■□□□ 1.59
SUSD3-205ENST00000617293 DCTN1Q14203 1278 aa24.96■■□□□ 1.59
SUSD3-205ENST00000617293 ADAMTS8Q9UP79 889 aa24.96■■□□□ 1.59
SUSD3-205ENST00000617293 TUBGCP6Q96RT7 1819 aa24.96■■□□□ 1.59
SUSD3-205ENST00000617293 CEMIPQ8WUJ3 1361 aa24.95■■□□□ 1.59
SUSD3-205ENST00000617293 MSH5O43196 834 aa24.95■■□□□ 1.58
SUSD3-205ENST00000617293 HTATSF1O43719 755 aaKnown RBP24.95■■□□□ 1.58
SUSD3-205ENST00000617293 NFE2L2Q16236 605 aa24.95■■□□□ 1.58
SUSD3-205ENST00000617293 CCDC146Q8IYE0 955 aa24.95■■□□□ 1.58
SUSD3-205ENST00000617293 ATF5Q9Y2D1 282 aaPredicted RBP24.95■■□□□ 1.58
SUSD3-205ENST00000617293 LRP5O75197 1615 aa24.94■■□□□ 1.58
SUSD3-205ENST00000617293 QSER1Q2KHR3 1735 aa24.94■■□□□ 1.58
SUSD3-205ENST00000617293 DLG5Q8TDM6 1919 aa24.94■■□□□ 1.58
SUSD3-205ENST00000617293 TTC5Q8N0Z6 440 aa24.93■■□□□ 1.58
SUSD3-205ENST00000617293 CCDC184Q52MB2 194 aa24.92■■□□□ 1.58
SUSD3-205ENST00000617293 COL23A1Q86Y22 540 aaPredicted RBP24.92■■□□□ 1.58
SUSD3-205ENST00000617293 MTFR1LQ9H019 292 aa24.92■■□□□ 1.58
SUSD3-205ENST00000617293 ZNF831Q5JPB2 1677 aa24.91■■□□□ 1.58
SUSD3-205ENST00000617293 SIPA1L3O60292 1781 aaPredicted RBP24.91■■□□□ 1.58
SUSD3-205ENST00000617293 BTBD11A6QL63 1104 aa24.91■■□□□ 1.58
SUSD3-205ENST00000617293 GNPATO15228 680 aa24.9■■□□□ 1.58
SUSD3-205ENST00000617293 PHF14O94880 888 aa24.9■■□□□ 1.58
SUSD3-205ENST00000617293 ZNF790Q6PG37 636 aa24.9■■□□□ 1.58
SUSD3-205ENST00000617293 SMIM5Q71RC9 77 aa24.9■■□□□ 1.58
SUSD3-205ENST00000617293 RUNDC1Q96C34 613 aa24.9■■□□□ 1.58
SUSD3-205ENST00000617293 RIPK4P57078 832 aa24.89■■□□□ 1.58
SUSD3-205ENST00000617293 AMIGO3Q86WK7 504 aa24.89■■□□□ 1.58
SUSD3-205ENST00000617293 FLAD1Q8NFF5 587 aa24.89■■□□□ 1.58
SUSD3-205ENST00000617293 SLC16A10Q8TF71 515 aa24.89■■□□□ 1.58
SUSD3-205ENST00000617293 TMPOP42166 694 aaKnown RBP24.88■■□□□ 1.57
SUSD3-205ENST00000617293 DNAJC10Q8IXB1 793 aa24.88■■□□□ 1.57
SUSD3-205ENST00000617293 UBR3Q6ZT12 1888 aa24.87■■□□□ 1.57
SUSD3-205ENST00000617293 COL5A3P25940 1745 aaPredicted RBP24.87■■□□□ 1.57
SUSD3-205ENST00000617293 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.87■■□□□ 1.57
SUSD3-205ENST00000617293 NEUROD2Q15784 382 aa24.87■■□□□ 1.57
SUSD3-205ENST00000617293 PPP1R1BQ9UD71 204 aaPredicted RBP24.87■■□□□ 1.57
SUSD3-205ENST00000617293 RRP7AQ9Y3A4 280 aaKnown RBP24.87■■□□□ 1.57
SUSD3-205ENST00000617293 KCPQ6ZWJ8 1503 aa24.86■■□□□ 1.57
SUSD3-205ENST00000617293 KCNQ3O43525 872 aa24.86■■□□□ 1.57
SUSD3-205ENST00000617293 SSFA2P28290 1259 aa24.86■■□□□ 1.57
SUSD3-205ENST00000617293 RC3H1Q5TC82 1133 aaKnown RBP24.86■■□□□ 1.57
SUSD3-205ENST00000617293 ZNF496Q96IT1 587 aaPredicted RBP24.86■■□□□ 1.57
SUSD3-205ENST00000617293 THUMPD2Q9BTF0 503 aaKnown RBP24.86■■□□□ 1.57
SUSD3-205ENST00000617293 MRS2Q9HD23 443 aa24.86■■□□□ 1.57
SUSD3-205ENST00000617293 RTCBQ9Y3I0 505 aaKnown RBP24.86■■□□□ 1.57
SUSD3-205ENST00000617293 CNTNAP4Q9C0A0 1308 aa24.86■■□□□ 1.57
SUSD3-205ENST00000617293 PTGER2P43116 358 aa24.85■■□□□ 1.57
SUSD3-205ENST00000617293 TAF7Q15545 349 aaPredicted RBP24.85■■□□□ 1.57
SUSD3-205ENST00000617293 VSIG10Q8N0Z9 540 aa24.85■■□□□ 1.57
SUSD3-205ENST00000617293 TJP1Q07157 1748 aa24.85■■□□□ 1.57
SUSD3-205ENST00000617293 UBR2Q8IWV8 1755 aa24.85■■□□□ 1.57
SUSD3-205ENST00000617293 CRKLP46109 303 aaKnown RBP24.84■■□□□ 1.57
SUSD3-205ENST00000617293 TRAPPC3LQ5T215 181 aa24.83■■□□□ 1.57
SUSD3-205ENST00000617293 FMNL2Q96PY5 1086 aa24.83■■□□□ 1.57
SUSD3-205ENST00000617293 MIS18AQ9NYP9 233 aa24.83■■□□□ 1.57
SUSD3-205ENST00000617293 MYH14Q7Z406 1995 aaKnown RBP24.83■■□□□ 1.57
SUSD3-205ENST00000617293 RPS6KA4O75676 772 aa24.82■■□□□ 1.56
SUSD3-205ENST00000617293 LMOD3Q0VAK6 560 aa24.82■■□□□ 1.56
SUSD3-205ENST00000617293 HEG1Q9ULI3 1381 aa24.81■■□□□ 1.56
SUSD3-205ENST00000617293 CYP19A1P11511 503 aaPredicted RBP24.81■■□□□ 1.56
SUSD3-205ENST00000617293 CICQ96RK0 1608 aaPredicted RBP24.8■■□□□ 1.56
SUSD3-205ENST00000617293 MSL1Q68DK7 614 aa24.8■■□□□ 1.56
SUSD3-205ENST00000617293 INTS5Q6P9B9 1019 aaKnown RBP24.8■■□□□ 1.56
SUSD3-205ENST00000617293 SGIP1Q9BQI5 828 aa24.8■■□□□ 1.56
SUSD3-205ENST00000617293 POLD1P28340 1107 aa24.79■■□□□ 1.56
SUSD3-205ENST00000617293 PNISRQ8TF01 805 aaKnown RBP24.79■■□□□ 1.56
SUSD3-205ENST00000617293 CCDC87Q9NVE4 849 aa24.79■■□□□ 1.56
SUSD3-205ENST00000617293 STARD3NLO95772 234 aa24.78■■□□□ 1.56
SUSD3-205ENST00000617293 ARHGEF1Q92888 912 aaKnown RBP24.78■■□□□ 1.56
SUSD3-205ENST00000617293 TEX13AQ9BXU3 409 aaPredicted RBP24.78■■□□□ 1.56
SUSD3-205ENST00000617293 APAF1O14727 1248 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms