RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 CEP131Q9UPN4 1083 aa6.98□□□□□ -1.29
RFX3-212ENST00000617270 CLGNO14967 610 aa6.98□□□□□ -1.29
RFX3-212ENST00000617270 TOP1P11387 765 aaKnown RBP6.98□□□□□ -1.29
RFX3-212ENST00000617270 MCM3P25205 808 aa6.98□□□□□ -1.29
RFX3-212ENST00000617270 ALS2CR12Q96Q35 445 aa6.98□□□□□ -1.29
RFX3-212ENST00000617270 ABTB2Q8N961 1025 aa6.98□□□□□ -1.29
RFX3-212ENST00000617270 KIF18AQ8NI77 898 aa6.98□□□□□ -1.29
RFX3-212ENST00000617270 MXRA7P84157 204 aa6.98□□□□□ -1.29
RFX3-212ENST00000617270 PLEKHO1Q53GL0 409 aaPredicted RBP6.98□□□□□ -1.29
RFX3-212ENST00000617270 C16orf45Q96MC5 204 aaPredicted RBP6.98□□□□□ -1.29
RFX3-212ENST00000617270 ZHX1Q9UKY1 873 aaPredicted RBP6.98□□□□□ -1.29
RFX3-212ENST00000617270 ADAMTS8Q9UP79 889 aa6.98□□□□□ -1.29
RFX3-212ENST00000617270 WDR78Q5VTH9 848 aa6.98□□□□□ -1.29
RFX3-212ENST00000617270 SRCIN1Q9C0H9 1055 aa6.98□□□□□ -1.29
RFX3-212ENST00000617270 SF3B2Q13435 895 aaKnown RBP6.98□□□□□ -1.29
RFX3-212ENST00000617270 RAB3IL1Q8TBN0 382 aa6.98□□□□□ -1.29
RFX3-212ENST00000617270 IKBKGQ9Y6K9 419 aa6.98□□□□□ -1.29
RFX3-212ENST00000617270 CEP112Q8N8E3 955 aa6.97□□□□□ -1.29
RFX3-212ENST00000617270 TAOK3Q9H2K8 898 aa6.97□□□□□ -1.29
RFX3-212ENST00000617270 LMAN1P49257 510 aa6.97□□□□□ -1.29
RFX3-212ENST00000617270 MNAT1P51948 309 aa6.97□□□□□ -1.29
RFX3-212ENST00000617270 FERMT2Q96AC1 680 aa6.97□□□□□ -1.29
RFX3-212ENST00000617270 TRMT1Q9NXH9 659 aaKnown RBP6.97□□□□□ -1.29
RFX3-212ENST00000617270 SSX2IPQ9Y2D8 614 aa6.97□□□□□ -1.29
RFX3-212ENST00000617270 XPCQ01831 940 aaPredicted RBP6.97□□□□□ -1.29
RFX3-212ENST00000617270 ZSCAN30Q86W11 494 aa6.97□□□□□ -1.29
RFX3-212ENST00000617270 CTNNA3Q9UI47 895 aa6.97□□□□□ -1.29
RFX3-212ENST00000617270 GPRASP1Q5JY77 1395 aa6.97□□□□□ -1.29
RFX3-212ENST00000617270 PAFAH1B1P43034 410 aa6.97□□□□□ -1.29
RFX3-212ENST00000617270 DDX54Q8TDD1 881 aaKnown RBP6.97□□□□□ -1.29
RFX3-212ENST00000617270 ZNF526Q8TF50 670 aaPredicted RBP6.97□□□□□ -1.29
RFX3-212ENST00000617270 CDCA7LQ96GN5 454 aa6.97□□□□□ -1.29
RFX3-212ENST00000617270 ZSCAN31Q96LW9 406 aaPredicted RBP6.97□□□□□ -1.29
RFX3-212ENST00000617270 BCAR3O75815 825 aa6.97□□□□□ -1.29
RFX3-212ENST00000617270 CABP4P57796 275 aa6.97□□□□□ -1.29
RFX3-212ENST00000617270 TMOD2Q9NZR1 351 aa6.97□□□□□ -1.29
RFX3-212ENST00000617270 CALCOCO1Q9P1Z2 691 aa6.97□□□□□ -1.29
RFX3-212ENST00000617270 CNTLNQ9NXG0 1405 aa6.97□□□□□ -1.29
RFX3-212ENST00000617270 YEATS4O95619 227 aa6.97□□□□□ -1.29
RFX3-212ENST00000617270 PUF60Q9UHX1 559 aaKnown RBP6.97□□□□□ -1.29
RFX3-212ENST00000617270 TDRD9Q8NDG6 1382 aaKnown RBP6.97□□□□□ -1.29
RFX3-212ENST00000617270 CCDC6Q16204 474 aa6.97□□□□□ -1.29
RFX3-212ENST00000617270 ESCO1Q5FWF5 840 aa6.97□□□□□ -1.29
RFX3-212ENST00000617270 SRGAP3O43295 1099 aa6.96□□□□□ -1.29
RFX3-212ENST00000617270 PLCD3Q8N3E9 789 aa6.96□□□□□ -1.29
RFX3-212ENST00000617270 USO1O60763 962 aaKnown RBP6.96□□□□□ -1.29
RFX3-212ENST00000617270 PRKCSHP14314 528 aaPredicted RBP6.96□□□□□ -1.29
RFX3-212ENST00000617270 MTHFSP49914 203 aa6.96□□□□□ -1.29
RFX3-212ENST00000617270 ABCF2Q9UG63 623 aa6.96□□□□□ -1.29
RFX3-212ENST00000617270 CRACR2BQ8N4Y2 399 aaPredicted RBP6.96□□□□□ -1.3
RFX3-212ENST00000617270 IL1RAPL2Q9NP60 686 aa6.96□□□□□ -1.3
RFX3-212ENST00000617270 TCERG1LQ5VWI1 586 aa6.96□□□□□ -1.3
RFX3-212ENST00000617270 NAP1L3Q99457 506 aaPredicted RBP6.96□□□□□ -1.3
RFX3-212ENST00000617270 RRBP1Q9P2E9 1410 aaKnown RBP6.96□□□□□ -1.3
RFX3-212ENST00000617270 CA8P35219 290 aa6.96□□□□□ -1.3
RFX3-212ENST00000617270 CCT4P50991 539 aaKnown RBP6.96□□□□□ -1.3
RFX3-212ENST00000617270 PAXIP1Q6ZW49 1069 aaPredicted RBP6.96□□□□□ -1.3
RFX3-212ENST00000617270 CFAP58Q5T655 872 aa6.96□□□□□ -1.3
RFX3-212ENST00000617270 DAAM2Q86T65 1068 aa6.96□□□□□ -1.3
RFX3-212ENST00000617270 PAIP2Q9BPZ3 127 aaKnown RBP6.96□□□□□ -1.3
RFX3-212ENST00000617270 A0A1W2PRG0 241 aa6.95□□□□□ -1.3
RFX3-212ENST00000617270 MYO1BO43795 1136 aa6.95□□□□□ -1.3
RFX3-212ENST00000617270 CCDC82Q8N4S0 544 aa6.95□□□□□ -1.3
RFX3-212ENST00000617270 ZSWIM4Q9H7M6 989 aa6.95□□□□□ -1.3
RFX3-212ENST00000617270 JADE2Q9NQC1 790 aa6.95□□□□□ -1.3
RFX3-212ENST00000617270 PSMC4P43686 418 aa6.95□□□□□ -1.3
RFX3-212ENST00000617270 SEPT6Q14141 434 aa6.95□□□□□ -1.3
RFX3-212ENST00000617270 CCDC83Q8IWF9 413 aa6.95□□□□□ -1.3
RFX3-212ENST00000617270 CKAP2LQ8IYA6 745 aa6.95□□□□□ -1.3
RFX3-212ENST00000617270 RNF216Q9NWF9 866 aaPredicted RBP6.95□□□□□ -1.3
RFX3-212ENST00000617270 NUTM1Q86Y26 1132 aa6.95□□□□□ -1.3
RFX3-212ENST00000617270 IQCGQ9H095 443 aaKnown RBP6.95□□□□□ -1.3
RFX3-212ENST00000617270 NUTM2BA6NNL0 878 aaPredicted RBP6.95□□□□□ -1.3
RFX3-212ENST00000617270 NUTM2EB1AL46 878 aaPredicted RBP6.95□□□□□ -1.3
RFX3-212ENST00000617270 TATP17735 454 aaPredicted RBP6.95□□□□□ -1.3
RFX3-212ENST00000617270 NUTM2AQ8IVF1 878 aaPredicted RBP6.95□□□□□ -1.3
RFX3-212ENST00000617270 OTUD6BQ8N6M0 293 aa6.95□□□□□ -1.3
RFX3-212ENST00000617270 ACTN2P35609 894 aa6.95□□□□□ -1.3
RFX3-212ENST00000617270 KRT32Q14532 448 aa6.95□□□□□ -1.3
RFX3-212ENST00000617270 PRPF40BQ6NWY9 871 aaKnown RBP6.95□□□□□ -1.3
RFX3-212ENST00000617270 ZNF530Q6P9A1 599 aaPredicted RBP6.95□□□□□ -1.3
RFX3-212ENST00000617270 NAA15Q9BXJ9 866 aaKnown RBP6.95□□□□□ -1.3
RFX3-212ENST00000617270 CCDC40Q4G0X9 1142 aa6.95□□□□□ -1.3
RFX3-212ENST00000617270 ZNF354CQ86Y25 554 aa6.95□□□□□ -1.3
RFX3-212ENST00000617270 MINDY4BA8MYZ0 360 aa6.95□□□□□ -1.3
RFX3-212ENST00000617270 POLR3DP05423 398 aaPredicted RBP6.95□□□□□ -1.3
RFX3-212ENST00000617270 TMEM132EQ6IEE7 984 aa6.95□□□□□ -1.3
RFX3-212ENST00000617270 HYPKQ9NX55 129 aa6.95□□□□□ -1.3
RFX3-212ENST00000617270 RB1CC1Q8TDY2 1594 aa6.95□□□□□ -1.3
RFX3-212ENST00000617270 TMEM266Q2M3C6 531 aa6.94□□□□□ -1.3
RFX3-212ENST00000617270 PPP4R3BQ5MIZ7 849 aa6.94□□□□□ -1.3
RFX3-212ENST00000617270 MSL1Q68DK7 614 aa6.94□□□□□ -1.3
RFX3-212ENST00000617270 DHX57Q6P158 1386 aaKnown RBP6.94□□□□□ -1.3
RFX3-212ENST00000617270 HSPA4P34932 840 aa6.94□□□□□ -1.3
RFX3-212ENST00000617270 IGHMBP2P38935 993 aaKnown RBP6.94□□□□□ -1.3
RFX3-212ENST00000617270 NOP2P46087 812 aaKnown RBP6.94□□□□□ -1.3
RFX3-212ENST00000617270 TOM1L2Q6ZVM7 507 aa6.94□□□□□ -1.3
RFX3-212ENST00000617270 ANO10Q9NW15 660 aa6.94□□□□□ -1.3
RFX3-212ENST00000617270 MTIF2P46199 727 aaKnown RBP6.94□□□□□ -1.3
RFX3-212ENST00000617270 TTLL12Q14166 644 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms