RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 KRT222Q8N1A0 295 aa12.45□□□□□ -0.42
CLTCL1-209ENST00000617103 WASF1Q92558 559 aa12.45□□□□□ -0.42
CLTCL1-209ENST00000617103 TAF4BQ92750 862 aa12.45□□□□□ -0.42
CLTCL1-209ENST00000617103 RBM27Q9P2N5 1060 aaKnown RBP12.45□□□□□ -0.42
CLTCL1-209ENST00000617103 ZKSCAN5Q9Y2L8 839 aa12.45□□□□□ -0.42
CLTCL1-209ENST00000617103 EFCAB5A4FU69 1503 aa12.45□□□□□ -0.42
CLTCL1-209ENST00000617103 ZNF165P49910 485 aa12.45□□□□□ -0.42
CLTCL1-209ENST00000617103 UBE2HP62256 183 aa12.45□□□□□ -0.42
CLTCL1-209ENST00000617103 RBM33Q96EV2 1170 aaKnown RBP12.45□□□□□ -0.42
CLTCL1-209ENST00000617103 POTEB2H3BUK9 544 aa12.45□□□□□ -0.42
CLTCL1-209ENST00000617103 NOLC1Q14978 699 aaKnown RBP eCLIP12.45□□□□□ -0.42
CLTCL1-209ENST00000617103 AFAP1Q8N556 730 aa12.45□□□□□ -0.42
CLTCL1-209ENST00000617103 TRIM27P14373 513 aa12.44□□□□□ -0.42
CLTCL1-209ENST00000617103 CDK19Q9BWU1 502 aa12.44□□□□□ -0.42
CLTCL1-209ENST00000617103 FBXO3Q9UK99 471 aa12.44□□□□□ -0.42
CLTCL1-209ENST00000617103 STX6O43752 255 aa12.44□□□□□ -0.42
CLTCL1-209ENST00000617103 SNW1Q13573 536 aaKnown RBP12.44□□□□□ -0.42
CLTCL1-209ENST00000617103 NUP133Q8WUM0 1156 aa12.44□□□□□ -0.42
CLTCL1-209ENST00000617103 NSD3Q9BZ95 1437 aa12.44□□□□□ -0.42
CLTCL1-209ENST00000617103 HS1BP3Q53T59 392 aa12.44□□□□□ -0.42
CLTCL1-209ENST00000617103 CEP135Q66GS9 1140 aa12.44□□□□□ -0.42
CLTCL1-209ENST00000617103 CEP131Q9UPN4 1083 aa12.44□□□□□ -0.42
CLTCL1-209ENST00000617103 HCLS1P14317 486 aaPredicted RBP12.43□□□□□ -0.42
CLTCL1-209ENST00000617103 GOLGA6L9A6NEM1 432 aa12.43□□□□□ -0.42
CLTCL1-209ENST00000617103 ABTB2Q8N961 1025 aa12.43□□□□□ -0.42
CLTCL1-209ENST00000617103 CNNM1Q9NRU3 951 aa12.43□□□□□ -0.42
CLTCL1-209ENST00000617103 DAPK1P53355 1430 aa12.43□□□□□ -0.42
CLTCL1-209ENST00000617103 PRDM2Q13029 1718 aa12.43□□□□□ -0.42
CLTCL1-209ENST00000617103 CCDC57Q2TAC2 916 aa12.43□□□□□ -0.42
CLTCL1-209ENST00000617103 ZNF397Q8NF99 534 aaPredicted RBP12.43□□□□□ -0.42
CLTCL1-209ENST00000617103 SMARCC1Q92922 1105 aaPredicted RBP12.43□□□□□ -0.42
CLTCL1-209ENST00000617103 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.43□□□□□ -0.429e-9■■■■■ 111.8
CLTCL1-209ENST00000617103 U3KPZ7 1027 aaPredicted RBP12.43□□□□□ -0.42
CLTCL1-209ENST00000617103 ATAD2Q6PL18 1390 aa12.43□□□□□ -0.42
CLTCL1-209ENST00000617103 FKBP4Q02790 459 aaKnown RBP eCLIP12.42□□□□□ -0.42
CLTCL1-209ENST00000617103 STX1AQ16623 288 aa12.42□□□□□ -0.42
CLTCL1-209ENST00000617103 MICALCLQ6ZW33 695 aa12.42□□□□□ -0.42
CLTCL1-209ENST00000617103 ANKRD18AQ8IVF6 992 aa12.42□□□□□ -0.42
CLTCL1-209ENST00000617103 SPA17Q15506 151 aa12.42□□□□□ -0.42
CLTCL1-209ENST00000617103 CEP126Q9P2H0 1117 aa12.42□□□□□ -0.42
CLTCL1-209ENST00000617103 CCDC171Q6TFL3 1326 aa12.42□□□□□ -0.42
CLTCL1-209ENST00000617103 BMP2KQ9NSY1 1161 aaPredicted RBP12.42□□□□□ -0.42
CLTCL1-209ENST00000617103 LMAN1P49257 510 aa12.41□□□□□ -0.42
CLTCL1-209ENST00000617103 ARHGAP5Q13017 1502 aa12.41□□□□□ -0.42
CLTCL1-209ENST00000617103 DHX37Q8IY37 1157 aaKnown RBP12.41□□□□□ -0.42
CLTCL1-209ENST00000617103 THUMPD2Q9BTF0 503 aaKnown RBP12.41□□□□□ -0.42
CLTCL1-209ENST00000617103 TMC6Q7Z403 805 aa12.41□□□□□ -0.42
CLTCL1-209ENST00000617103 C8orf76Q96K31 380 aa12.41□□□□□ -0.42
CLTCL1-209ENST00000617103 UBAC1Q9BSL1 405 aa12.41□□□□□ -0.42
CLTCL1-209ENST00000617103 GTPBP4Q9BZE4 634 aaKnown RBP12.41□□□□□ -0.42
CLTCL1-209ENST00000617103 C8orf34Q49A92 452 aa12.4□□□□□ -0.42
CLTCL1-209ENST00000617103 FSIP1Q8NA03 581 aa12.4□□□□□ -0.42
CLTCL1-209ENST00000617103 GNL3LQ9NVN8 582 aaKnown RBP12.4□□□□□ -0.42
CLTCL1-209ENST00000617103 HMGB1P09429 215 aaKnown RBP12.4□□□□□ -0.42
CLTCL1-209ENST00000617103 IKQ13123 557 aaPredicted RBP12.4□□□□□ -0.42
CLTCL1-209ENST00000617103 ZNF530Q6P9A1 599 aaPredicted RBP12.4□□□□□ -0.42
CLTCL1-209ENST00000617103 OSCARQ8IYS5 282 aa12.4□□□□□ -0.42
CLTCL1-209ENST00000617103 DYDC1Q8WWB3 177 aa12.4□□□□□ -0.42
CLTCL1-209ENST00000617103 SNX21Q969T3 373 aa12.4□□□□□ -0.42
CLTCL1-209ENST00000617103 ZHX3Q9H4I2 956 aa12.4□□□□□ -0.42
CLTCL1-209ENST00000617103 TFIP11Q9UBB9 837 aaKnown RBP12.4□□□□□ -0.42
CLTCL1-209ENST00000617103 PAFAH1B1P43034 410 aa12.4□□□□□ -0.42
CLTCL1-209ENST00000617103 KIF6Q6ZMV9 814 aa12.4□□□□□ -0.42
CLTCL1-209ENST00000617103 SYNJ1O43426 1573 aa12.4□□□□□ -0.42
CLTCL1-209ENST00000617103 ANKRD62A6NC57 917 aa12.4□□□□□ -0.42
CLTCL1-209ENST00000617103 HDAC1Q13547 482 aaPredicted RBP12.4□□□□□ -0.42
CLTCL1-209ENST00000617103 CCDC150Q8NCX0 1101 aa12.4□□□□□ -0.42
CLTCL1-209ENST00000617103 GJB2P29033 226 aa12.39□□□□□ -0.43
CLTCL1-209ENST00000617103 SOGA3Q5TF21 947 aa12.39□□□□□ -0.43
CLTCL1-209ENST00000617103 KLHL10Q6JEL2 608 aa12.39□□□□□ -0.43
CLTCL1-209ENST00000617103 SAMD1Q6SPF0 538 aaPredicted RBP12.39□□□□□ -0.43
CLTCL1-209ENST00000617103 DDX54Q8TDD1 881 aaKnown RBP12.39□□□□□ -0.43
CLTCL1-209ENST00000617103 ZNF830Q96NB3 372 aaPredicted RBP12.39□□□□□ -0.43
CLTCL1-209ENST00000617103 RAI14Q9P0K7 980 aa12.39□□□□□ -0.43
CLTCL1-209ENST00000617103 EZRP15311 586 aaKnown RBP12.39□□□□□ -0.43
CLTCL1-209ENST00000617103 CCDC94Q9BW85 323 aaPredicted RBP12.39□□□□□ -0.43
CLTCL1-209ENST00000617103 GIMAP6Q6P9H5 292 aa12.38□□□□□ -0.43
CLTCL1-209ENST00000617103 TROQ12816 1431 aaPredicted RBP12.38□□□□□ -0.43
CLTCL1-209ENST00000617103 RNF187Q5TA31 235 aaPredicted RBP12.38□□□□□ -0.43
CLTCL1-209ENST00000617103 TMX3Q96JJ7 454 aa12.38□□□□□ -0.43
CLTCL1-209ENST00000617103 MAP2K1Q02750 393 aaPredicted RBP12.38□□□□□ -0.43
CLTCL1-209ENST00000617103 TTC22Q5TAA0 569 aa12.38□□□□□ -0.43
CLTCL1-209ENST00000617103 RRS1Q15050 365 aaKnown RBP12.38□□□□□ -0.43
CLTCL1-209ENST00000617103 LUZP1Q86V48 1076 aa12.38□□□□□ -0.43
CLTCL1-209ENST00000617103 RPGRIP1LQ68CZ1 1315 aa12.37□□□□□ -0.43
CLTCL1-209ENST00000617103 USO1O60763 962 aaKnown RBP12.37□□□□□ -0.43
CLTCL1-209ENST00000617103 TDO2P48775 406 aa12.37□□□□□ -0.43
CLTCL1-209ENST00000617103 FAM200AQ8TCP9 573 aa12.37□□□□□ -0.43
CLTCL1-209ENST00000617103 SLC26A8Q96RN1 970 aa12.37□□□□□ -0.43
CLTCL1-209ENST00000617103 MAP3K1Q13233 1512 aa12.37□□□□□ -0.43
CLTCL1-209ENST00000617103 YEATS4O95619 227 aa12.37□□□□□ -0.43
CLTCL1-209ENST00000617103 GNG11P61952 73 aa12.37□□□□□ -0.43
CLTCL1-209ENST00000617103 FKBP15Q5T1M5 1219 aa12.37□□□□□ -0.43
CLTCL1-209ENST00000617103 CCDC186Q7Z3E2 898 aa12.37□□□□□ -0.43
CLTCL1-209ENST00000617103 GPATCH11Q8N954 259 aa12.37□□□□□ -0.43
CLTCL1-209ENST00000617103 CNNM3Q8NE01 707 aa12.37□□□□□ -0.43
CLTCL1-209ENST00000617103 IPO4Q8TEX9 1081 aaKnown RBP12.37□□□□□ -0.43
CLTCL1-209ENST00000617103 BOLA2Q9H3K6 86 aa12.37□□□□□ -0.43
CLTCL1-209ENST00000617103 NUCB1Q02818 461 aa12.37□□□□□ -0.43
CLTCL1-209ENST00000617103 CTR9Q6PD62 1173 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms