RNA–Protein interactions for RNA: ENST00000617022.4

DDB2-212, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 2

Gene DDB2, Length 2,181 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-212ENST00000617022 DDX54Q8TDD1 881 aaKnown RBP20.46■□□□□ 0.87
DDB2-212ENST00000617022 BCL9LQ86UU0 1499 aa20.45■□□□□ 0.86
DDB2-212ENST00000617022 SCN11AQ9UI33 1791 aa20.45■□□□□ 0.86
DDB2-212ENST00000617022 MEX3CQ5U5Q3 659 aaKnown RBP20.45■□□□□ 0.86
DDB2-212ENST00000617022 UBE2Q2Q8WVN8 375 aa20.45■□□□□ 0.86
DDB2-212ENST00000617022 SSH1Q8WYL5 1049 aa20.45■□□□□ 0.86
DDB2-212ENST00000617022 ZBTB47Q9UFB7 747 aaPredicted RBP20.45■□□□□ 0.86
DDB2-212ENST00000617022 SPATA31A5Q5VU36 1347 aa20.44■□□□□ 0.86
DDB2-212ENST00000617022 SPATA31A7Q8IWB4 1347 aa20.44■□□□□ 0.86
DDB2-212ENST00000617022 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.44■□□□□ 0.86
DDB2-212ENST00000617022 DCAF5Q96JK2 942 aa20.44■□□□□ 0.86
DDB2-212ENST00000617022 SMC4Q9NTJ3 1288 aa20.44■□□□□ 0.86
DDB2-212ENST00000617022 C20orf194Q5TEA3 1177 aa20.44■□□□□ 0.86
DDB2-212ENST00000617022 FNBP4Q8N3X1 1017 aaPredicted RBP20.44■□□□□ 0.86
DDB2-212ENST00000617022 FRAT1Q92837 279 aaPredicted RBP20.44■□□□□ 0.86
DDB2-212ENST00000617022 BABAM1Q9NWV8 329 aa20.44■□□□□ 0.86
DDB2-212ENST00000617022 WNK3Q9BYP7 1800 aa20.43■□□□□ 0.86
DDB2-212ENST00000617022 BTBD11A6QL63 1104 aa20.43■□□□□ 0.86
DDB2-212ENST00000617022 HSP90AB1P08238 724 aaKnown RBP20.43■□□□□ 0.86
DDB2-212ENST00000617022 IL27Q8NEV9 243 aa20.42■□□□□ 0.86
DDB2-212ENST00000617022 CANXP27824 592 aaKnown RBP20.42■□□□□ 0.86
DDB2-212ENST00000617022 SIPA1L3O60292 1781 aaPredicted RBP20.41■□□□□ 0.86
DDB2-212ENST00000617022 TCERG1O14776 1098 aaKnown RBP20.41■□□□□ 0.86
DDB2-212ENST00000617022 KCNQ3O43525 872 aa20.41■□□□□ 0.86
DDB2-212ENST00000617022 SLC52A2Q9HAB3 445 aa20.41■□□□□ 0.86
DDB2-212ENST00000617022 USP21Q9UK80 565 aa20.41■□□□□ 0.86
DDB2-212ENST00000617022 THRAP3Q9Y2W1 955 aaKnown RBP20.41■□□□□ 0.86
DDB2-212ENST00000617022 KDM3BQ7LBC6 1761 aa20.41■□□□□ 0.86
DDB2-212ENST00000617022 ALDH1L2Q3SY69 923 aa20.4■□□□□ 0.86
DDB2-212ENST00000617022 NFATC2IPQ8NCF5 419 aa20.4■□□□□ 0.86
DDB2-212ENST00000617022 ZNF428Q96B54 188 aa20.4■□□□□ 0.86
DDB2-212ENST00000617022 VPS72Q15906 364 aa20.39■□□□□ 0.85
DDB2-212ENST00000617022 EXOC5O00471 708 aa20.38■□□□□ 0.85
DDB2-212ENST00000617022 NKX1-1Q15270 411 aaPredicted RBP20.38■□□□□ 0.85
DDB2-212ENST00000617022 MRC1P22897 1456 aa20.38■□□□□ 0.85
DDB2-212ENST00000617022 EIF4A1P60842 406 aaKnown RBP20.37■□□□□ 0.85
DDB2-212ENST00000617022 EXOC6Q8TAG9 804 aa20.37■□□□□ 0.85
DDB2-212ENST00000617022 CDCA7Q9BWT1 371 aaPredicted RBP20.37■□□□□ 0.85
DDB2-212ENST00000617022 TNNQ9UQP3 1299 aa20.37■□□□□ 0.85
DDB2-212ENST00000617022 TNS2Q63HR2 1409 aa20.37■□□□□ 0.85
DDB2-212ENST00000617022 CABP4P57796 275 aa20.36■□□□□ 0.85
DDB2-212ENST00000617022 CRBNQ96SW2 442 aa20.36■□□□□ 0.85
DDB2-212ENST00000617022 AFF2P51816 1311 aa20.36■□□□□ 0.85
DDB2-212ENST00000617022 SLC39A6Q13433 755 aa20.36■□□□□ 0.85
DDB2-212ENST00000617022 BARGINQ6ZT62 677 aa20.36■□□□□ 0.85
DDB2-212ENST00000617022 MRPL50Q8N5N7 158 aaKnown RBP20.36■□□□□ 0.85
DDB2-212ENST00000617022 NOB1Q9ULX3 412 aaKnown RBP20.36■□□□□ 0.85
DDB2-212ENST00000617022 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.36■□□□□ 0.85
DDB2-212ENST00000617022 FAM98CQ17RN3 349 aaKnown RBP20.35■□□□□ 0.85
DDB2-212ENST00000617022 DDB1Q16531 1140 aa20.35■□□□□ 0.85
DDB2-212ENST00000617022 ZKSCAN2Q63HK3 967 aa20.34■□□□□ 0.85
DDB2-212ENST00000617022 TOGARAM1Q9Y4F4 1720 aa20.34■□□□□ 0.85
DDB2-212ENST00000617022 PANK1Q8TE04 598 aa20.34■□□□□ 0.85
DDB2-212ENST00000617022 CLUAP1Q96AJ1 413 aa20.34■□□□□ 0.85
DDB2-212ENST00000617022 KIF16BQ96L93 1317 aa20.34■□□□□ 0.85
DDB2-212ENST00000617022 ERVV-2B6SEH9 535 aa20.33■□□□□ 0.85
DDB2-212ENST00000617022 ZNF790Q6PG37 636 aa20.33■□□□□ 0.85
DDB2-212ENST00000617022 NECTIN2Q92692 538 aa20.33■□□□□ 0.85
DDB2-212ENST00000617022 CCDC136Q96JN2 1154 aa20.33■□□□□ 0.85
DDB2-212ENST00000617022 BRPF1P55201 1214 aaPredicted RBP20.32■□□□□ 0.84
DDB2-212ENST00000617022 TRIM27P14373 513 aa20.31■□□□□ 0.84
DDB2-212ENST00000617022 PDE3AQ14432 1141 aa20.31■□□□□ 0.84
DDB2-212ENST00000617022 RLBP1P12271 317 aa20.31■□□□□ 0.84
DDB2-212ENST00000617022 ATF7IPQ6VMQ6 1270 aa20.3■□□□□ 0.84
DDB2-212ENST00000617022 TTC5Q8N0Z6 440 aa20.29■□□□□ 0.84
DDB2-212ENST00000617022 SOS1Q07889 1333 aaPredicted RBP20.29■□□□□ 0.84
DDB2-212ENST00000617022 A0A0G2JS52 829 aa20.29■□□□□ 0.84
DDB2-212ENST00000617022 SLC4A2P04920 1241 aa20.29■□□□□ 0.84
DDB2-212ENST00000617022 HDGFL1Q5TGJ6 251 aa20.29■□□□□ 0.84
DDB2-212ENST00000617022 COG6Q9Y2V7 657 aa20.29■□□□□ 0.84
DDB2-212ENST00000617022 HEG1Q9ULI3 1381 aa20.29■□□□□ 0.84
DDB2-212ENST00000617022 PRAMEF22A3QJZ6 481 aa20.28■□□□□ 0.84
DDB2-212ENST00000617022 IPO8O15397 1037 aaKnown RBP20.28■□□□□ 0.84
DDB2-212ENST00000617022 EIF2S2P20042 333 aaKnown RBP20.28■□□□□ 0.84
DDB2-212ENST00000617022 CCDC30Q5VVM6 783 aa20.28■□□□□ 0.84
DDB2-212ENST00000617022 FTSJ3Q8IY81 847 aaKnown RBP20.28■□□□□ 0.84
DDB2-212ENST00000617022 GLI3P10071 1580 aa20.28■□□□□ 0.84
DDB2-212ENST00000617022 GIGYF1O75420 1035 aaPredicted RBP20.28■□□□□ 0.84
DDB2-212ENST00000617022 DZIP1LQ8IYY4 767 aaKnown RBP20.28■□□□□ 0.84
DDB2-212ENST00000617022 MARCH10Q8NA82 808 aaPredicted RBP20.28■□□□□ 0.84
DDB2-212ENST00000617022 ZNF496Q96IT1 587 aaPredicted RBP20.28■□□□□ 0.84
DDB2-212ENST00000617022 GJD4Q96KN9 370 aaPredicted RBP20.28■□□□□ 0.84
DDB2-212ENST00000617022 TMOD3Q9NYL9 352 aa20.28■□□□□ 0.84
DDB2-212ENST00000617022 HOXB7P09629 217 aa20.27■□□□□ 0.84
DDB2-212ENST00000617022 STK31Q9BXU1 1019 aa20.27■□□□□ 0.84
DDB2-212ENST00000617022 TRPC5Q9UL62 973 aaPredicted RBP20.27■□□□□ 0.83
DDB2-212ENST00000617022 ATRNO75882 1429 aa20.26■□□□□ 0.83
DDB2-212ENST00000617022 RTN4Q9NQC3 1192 aaKnown RBP20.26■□□□□ 0.83
DDB2-212ENST00000617022 G2E3Q7L622 706 aa20.25■□□□□ 0.83
DDB2-212ENST00000617022 PIGBQ92521 554 aa20.25■□□□□ 0.83
DDB2-212ENST00000617022 SYTL4Q96C24 671 aaPredicted RBP20.25■□□□□ 0.83
DDB2-212ENST00000617022 ITGB4P16144 1822 aa20.24■□□□□ 0.83
DDB2-212ENST00000617022 DOT1LQ8TEK3 1739 aa20.24■□□□□ 0.83
DDB2-212ENST00000617022 ARHGAP45Q92619 1136 aa20.24■□□□□ 0.83
DDB2-212ENST00000617022 C5P01031 1676 aa20.24■□□□□ 0.83
DDB2-212ENST00000617022 MS4A1P11836 297 aa20.24■□□□□ 0.83
DDB2-212ENST00000617022 FMNL2Q96PY5 1086 aa20.24■□□□□ 0.83
DDB2-212ENST00000617022 QTRT2Q9H974 415 aaKnown RBP20.24■□□□□ 0.83
DDB2-212ENST00000617022 PAPPAQ13219 1627 aa20.23■□□□□ 0.83
DDB2-212ENST00000617022 THSD7AQ9UPZ6 1657 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms