RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 JAKMIP1Q96N16 626 aaKnown RBP6.77□□□□□ -1.33
SYNCRIP-204ENST00000616122 H3BQV1 296 aa6.76□□□□□ -1.33
SYNCRIP-204ENST00000616122 RAB11FIP3O75154 756 aa6.76□□□□□ -1.33
SYNCRIP-204ENST00000616122 IFFO2Q5TF58 517 aa6.76□□□□□ -1.33
SYNCRIP-204ENST00000616122 BICD2Q8TD16 824 aa6.76□□□□□ -1.33
SYNCRIP-204ENST00000616122 ESYT1Q9BSJ8 1104 aa6.76□□□□□ -1.33
SYNCRIP-204ENST00000616122 BOLA2Q9H3K6 86 aa6.76□□□□□ -1.33
SYNCRIP-204ENST00000616122 SOS1Q07889 1333 aaPredicted RBP6.76□□□□□ -1.33
SYNCRIP-204ENST00000616122 CHAF1AQ13111 956 aaPredicted RBP6.76□□□□□ -1.33
SYNCRIP-204ENST00000616122 RAB3GAP1Q15042 981 aa6.76□□□□□ -1.33
SYNCRIP-204ENST00000616122 CCDC8Q9H0W5 538 aaPredicted RBP6.76□□□□□ -1.33
SYNCRIP-204ENST00000616122 PNMA6EA0A0J9YXQ4 647 aa6.76□□□□□ -1.33
SYNCRIP-204ENST00000616122 CPLX2Q6PUV4 134 aaKnown RBP6.76□□□□□ -1.33
SYNCRIP-204ENST00000616122 LRRC59Q96AG4 307 aaKnown RBP6.76□□□□□ -1.33
SYNCRIP-204ENST00000616122 NBPF7P0C2Y1 421 aaPredicted RBP6.76□□□□□ -1.33
SYNCRIP-204ENST00000616122 LARP1BQ659C4 914 aaKnown RBP6.76□□□□□ -1.33
SYNCRIP-204ENST00000616122 PRPF40BQ6NWY9 871 aaKnown RBP6.76□□□□□ -1.33
SYNCRIP-204ENST00000616122 CHPF2Q9P2E5 772 aa6.76□□□□□ -1.33
SYNCRIP-204ENST00000616122 SYCE3A1L190 88 aa6.76□□□□□ -1.33
SYNCRIP-204ENST00000616122 CPLX1O14810 134 aa6.76□□□□□ -1.33
SYNCRIP-204ENST00000616122 ZSCAN30Q86W11 494 aa6.76□□□□□ -1.33
SYNCRIP-204ENST00000616122 PIK3R4Q99570 1358 aa6.76□□□□□ -1.33
SYNCRIP-204ENST00000616122 GSPT1P15170 499 aaKnown RBP6.75□□□□□ -1.33
SYNCRIP-204ENST00000616122 PSMA5P28066 241 aa6.75□□□□□ -1.33
SYNCRIP-204ENST00000616122 LARP6Q9BRS8 491 aaKnown RBP6.75□□□□□ -1.33
SYNCRIP-204ENST00000616122 TOMM22Q9NS69 142 aa6.75□□□□□ -1.33
SYNCRIP-204ENST00000616122 BECN2A8MW95 431 aa6.75□□□□□ -1.33
SYNCRIP-204ENST00000616122 ANAPC15P60006 121 aa6.75□□□□□ -1.33
SYNCRIP-204ENST00000616122 UBE3BQ7Z3V4 1068 aa6.75□□□□□ -1.33
SYNCRIP-204ENST00000616122 CEP126Q9P2H0 1117 aa6.75□□□□□ -1.33
SYNCRIP-204ENST00000616122 LIMCH1Q9UPQ0 1083 aa6.75□□□□□ -1.33
SYNCRIP-204ENST00000616122 RTL1A6NKG5 1358 aa6.75□□□□□ -1.33
SYNCRIP-204ENST00000616122 AATKQ6ZMQ8 1374 aa6.75□□□□□ -1.33
SYNCRIP-204ENST00000616122 ZFYVE16Q7Z3T8 1539 aa6.75□□□□□ -1.33
SYNCRIP-204ENST00000616122 HOXC9P31274 260 aa6.75□□□□□ -1.33
SYNCRIP-204ENST00000616122 HSP90AA2PQ14568 343 aaPredicted RBP6.75□□□□□ -1.33
SYNCRIP-204ENST00000616122 LRRFIP1Q32MZ4 808 aaKnown RBP6.75□□□□□ -1.33
SYNCRIP-204ENST00000616122 TCEANC2Q96MN5 208 aa6.75□□□□□ -1.33
SYNCRIP-204ENST00000616122 DNAJC2Q99543 621 aaKnown RBP6.75□□□□□ -1.33
SYNCRIP-204ENST00000616122 ARAP3Q8WWN8 1544 aa6.75□□□□□ -1.33
SYNCRIP-204ENST00000616122 PNPLA6Q8IY17 1366 aa6.75□□□□□ -1.33
SYNCRIP-204ENST00000616122 KIAA0232Q92628 1395 aa6.75□□□□□ -1.33
SYNCRIP-204ENST00000616122 HIP1O00291 1037 aa6.75□□□□□ -1.33
SYNCRIP-204ENST00000616122 CHMLP26374 656 aa6.75□□□□□ -1.33
SYNCRIP-204ENST00000616122 SLC39A6Q13433 755 aa6.75□□□□□ -1.33
SYNCRIP-204ENST00000616122 A0A087WZG4 1122 aa6.74□□□□□ -1.33
SYNCRIP-204ENST00000616122 NBPF6Q5VWK0 638 aa6.74□□□□□ -1.33
SYNCRIP-204ENST00000616122 NBPF4Q96M43 638 aa6.74□□□□□ -1.33
SYNCRIP-204ENST00000616122 ORAI2Q96SN7 254 aa6.74□□□□□ -1.33
SYNCRIP-204ENST00000616122 EVA1CP58658 441 aa6.74□□□□□ -1.33
SYNCRIP-204ENST00000616122 KRT85P78386 507 aa6.74□□□□□ -1.33
SYNCRIP-204ENST00000616122 CCDC173Q0VFZ6 552 aa6.74□□□□□ -1.33
SYNCRIP-204ENST00000616122 ALDH1L1O75891 902 aa6.74□□□□□ -1.33
SYNCRIP-204ENST00000616122 GTF2E1P29083 439 aaPredicted RBP6.74□□□□□ -1.33
SYNCRIP-204ENST00000616122 GNL2Q13823 731 aaKnown RBP6.74□□□□□ -1.33
SYNCRIP-204ENST00000616122 KSR2Q6VAB6 950 aa6.74□□□□□ -1.33
SYNCRIP-204ENST00000616122 CHMP4CQ96CF2 233 aa6.74□□□□□ -1.33
SYNCRIP-204ENST00000616122 CASTP20810 708 aaKnown RBP6.74□□□□□ -1.33
SYNCRIP-204ENST00000616122 WASHC4Q2M389 1173 aa6.74□□□□□ -1.33
SYNCRIP-204ENST00000616122 SYTL4Q96C24 671 aaPredicted RBP6.74□□□□□ -1.33
SYNCRIP-204ENST00000616122 LGR6Q9HBX8 967 aa6.74□□□□□ -1.33
SYNCRIP-204ENST00000616122 CD2BP2O95400 341 aaKnown RBP6.74□□□□□ -1.33
SYNCRIP-204ENST00000616122 CHRNA2Q15822 529 aa6.74□□□□□ -1.33
SYNCRIP-204ENST00000616122 CWF19L2Q2TBE0 894 aaKnown RBP6.74□□□□□ -1.33
SYNCRIP-204ENST00000616122 TOM1L2Q6ZVM7 507 aa6.74□□□□□ -1.33
SYNCRIP-204ENST00000616122 COPS6Q7L5N1 327 aa6.74□□□□□ -1.33
SYNCRIP-204ENST00000616122 ANKRD24Q8TF21 1146 aa6.74□□□□□ -1.33
SYNCRIP-204ENST00000616122 IP6K1Q92551 441 aa6.74□□□□□ -1.33
SYNCRIP-204ENST00000616122 CCDC83Q8IWF9 413 aa6.74□□□□□ -1.33
SYNCRIP-204ENST00000616122 ARID3AQ99856 593 aa6.74□□□□□ -1.33
SYNCRIP-204ENST00000616122 SDF4Q9BRK5 362 aa6.74□□□□□ -1.33
SYNCRIP-204ENST00000616122 SBNO1A3KN83 1393 aa6.73□□□□□ -1.33
SYNCRIP-204ENST00000616122 RALYLQ86SE5 291 aaKnown RBP6.73□□□□□ -1.33
SYNCRIP-204ENST00000616122 HYPKQ9NX55 129 aa6.73□□□□□ -1.33
SYNCRIP-204ENST00000616122 PA2G4Q9UQ80 394 aaKnown RBP6.73□□□□□ -1.33
SYNCRIP-204ENST00000616122 PREX2Q70Z35 1606 aa6.73□□□□□ -1.33
SYNCRIP-204ENST00000616122 APPP05067 770 aa6.73□□□□□ -1.33
SYNCRIP-204ENST00000616122 CABP4P57796 275 aa6.73□□□□□ -1.33
SYNCRIP-204ENST00000616122 ANKRD13DQ6ZTN6 518 aa6.73□□□□□ -1.33
SYNCRIP-204ENST00000616122 ZSCAN31Q96LW9 406 aaPredicted RBP6.73□□□□□ -1.33
SYNCRIP-204ENST00000616122 PDRG1Q9NUG6 133 aa6.73□□□□□ -1.33
SYNCRIP-204ENST00000616122 CFAP65Q6ZU64 1925 aaKnown RBP6.73□□□□□ -1.33
SYNCRIP-204ENST00000616122 ROBO2Q9HCK4 1378 aa6.73□□□□□ -1.33
SYNCRIP-204ENST00000616122 KRT28Q7Z3Y7 464 aa6.73□□□□□ -1.33
SYNCRIP-204ENST00000616122 DDX21Q9NR30 783 aaKnown RBP eCLIP6.73□□□□□ -1.33
SYNCRIP-204ENST00000616122 MAP3K2Q9Y2U5 619 aa6.73□□□□□ -1.33
SYNCRIP-204ENST00000616122 ATP5J2-PTCD1G3V325 749 aa6.73□□□□□ -1.33
SYNCRIP-204ENST00000616122 HOXB7P09629 217 aa6.73□□□□□ -1.33
SYNCRIP-204ENST00000616122 FAM13BQ9NYF5 915 aa6.73□□□□□ -1.33
SYNCRIP-204ENST00000616122 GRM8O00222 908 aa6.73□□□□□ -1.33
SYNCRIP-204ENST00000616122 TRDNQ13061 729 aa6.73□□□□□ -1.33
SYNCRIP-204ENST00000616122 CCDC73Q6ZRK6 1079 aa6.73□□□□□ -1.33
SYNCRIP-204ENST00000616122 SSH3Q8TE77 659 aa6.73□□□□□ -1.33
SYNCRIP-204ENST00000616122 CCDC85AQ96PX6 553 aaPredicted RBP6.73□□□□□ -1.33
SYNCRIP-204ENST00000616122 STRN4Q9NRL3 753 aa6.72□□□□□ -1.33
SYNCRIP-204ENST00000616122 GOLGA6L19H0YKK7 550 aa6.72□□□□□ -1.33
SYNCRIP-204ENST00000616122 NPHP1O15259 732 aa6.72□□□□□ -1.33
SYNCRIP-204ENST00000616122 CLCN1P35523 988 aa6.72□□□□□ -1.33
SYNCRIP-204ENST00000616122 AKAP4Q5JQC9 854 aa6.72□□□□□ -1.33
SYNCRIP-204ENST00000616122 IFNL2Q8IZJ0 200 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms