RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 POLR3AO14802 1390 aaPredicted RBP6.65□□□□□ -1.34
SYCP1-209ENST00000613524 KCNQ2O43526 872 aa6.65□□□□□ -1.34
SYCP1-209ENST00000613524 ARHGEF25Q86VW2 580 aa6.65□□□□□ -1.34
SYCP1-209ENST00000613524 TCP11L2Q8N4U5 519 aa6.65□□□□□ -1.34
SYCP1-209ENST00000613524 UPF1Q92900 1129 aaKnown RBP eCLIP6.65□□□□□ -1.34
SYCP1-209ENST00000613524 RFX1P22670 979 aa6.65□□□□□ -1.35
SYCP1-209ENST00000613524 MTHFSP49914 203 aa6.65□□□□□ -1.35
SYCP1-209ENST00000613524 NBPF6Q5VWK0 638 aa6.65□□□□□ -1.35
SYCP1-209ENST00000613524 DPY19L2Q6NUT2 758 aa6.65□□□□□ -1.35
SYCP1-209ENST00000613524 NBPF4Q96M43 638 aa6.65□□□□□ -1.35
SYCP1-209ENST00000613524 POM121CA8CG34 1229 aa6.64□□□□□ -1.35
SYCP1-209ENST00000613524 PITPNM1O00562 1244 aa6.64□□□□□ -1.35
SYCP1-209ENST00000613524 APBA3O96018 575 aa6.64□□□□□ -1.35
SYCP1-209ENST00000613524 HOXC9P31274 260 aa6.64□□□□□ -1.35
SYCP1-209ENST00000613524 CAMK2BQ13554 666 aa6.64□□□□□ -1.35
SYCP1-209ENST00000613524 MFSD10Q14728 455 aa6.64□□□□□ -1.35
SYCP1-209ENST00000613524 REM2Q8IYK8 340 aaPredicted RBP6.64□□□□□ -1.35
SYCP1-209ENST00000613524 RGS12O14924 1447 aa6.64□□□□□ -1.35
SYCP1-209ENST00000613524 ANKRD36BQ8N2N9 1353 aa6.64□□□□□ -1.35
SYCP1-209ENST00000613524 PPP1R15BQ5SWA1 713 aa6.64□□□□□ -1.35
SYCP1-209ENST00000613524 SMIM5Q71RC9 77 aa6.64□□□□□ -1.35
SYCP1-209ENST00000613524 KIAA1210Q9ULL0 1709 aa6.64□□□□□ -1.35
SYCP1-209ENST00000613524 EXOC5O00471 708 aa6.63□□□□□ -1.35
SYCP1-209ENST00000613524 VPS72Q15906 364 aa6.63□□□□□ -1.35
SYCP1-209ENST00000613524 MPRIPQ6WCQ1 1025 aa6.63□□□□□ -1.35
SYCP1-209ENST00000613524 RAPGEF4Q8WZA2 1011 aa6.63□□□□□ -1.35
SYCP1-209ENST00000613524 CCDC7Q96M83 1385 aa6.63□□□□□ -1.35
SYCP1-209ENST00000613524 TTC21AQ8NDW8 1320 aa6.63□□□□□ -1.35
SYCP1-209ENST00000613524 CD163L1Q9NR16 1453 aa6.63□□□□□ -1.35
SYCP1-209ENST00000613524 SPATA31A1Q5TZJ5 1347 aa6.63□□□□□ -1.35
SYCP1-209ENST00000613524 EDC4Q6P2E9 1401 aaKnown RBP6.63□□□□□ -1.35
SYCP1-209ENST00000613524 PDE4AP27815 886 aa6.63□□□□□ -1.35
SYCP1-209ENST00000613524 SULT6B1Q6IMI4 303 aa6.63□□□□□ -1.35
SYCP1-209ENST00000613524 FBXW7Q969H0 707 aa6.63□□□□□ -1.35
SYCP1-209ENST00000613524 DDRGK1Q96HY6 314 aa6.63□□□□□ -1.35
SYCP1-209ENST00000613524 POLKQ9UBT6 870 aa6.63□□□□□ -1.35
SYCP1-209ENST00000613524 CAMTA1Q9Y6Y1 1673 aa6.63□□□□□ -1.35
SYCP1-209ENST00000613524 ITSN1Q15811 1721 aa6.62□□□□□ -1.35
SYCP1-209ENST00000613524 SPATA31A5Q5VU36 1347 aa6.62□□□□□ -1.35
SYCP1-209ENST00000613524 SPATA31A7Q8IWB4 1347 aa6.62□□□□□ -1.35
SYCP1-209ENST00000613524 KIF1AQ12756 1690 aa6.62□□□□□ -1.35
SYCP1-209ENST00000613524 PPP1R1BQ9UD71 204 aaPredicted RBP6.62□□□□□ -1.35
SYCP1-209ENST00000613524 ZNF330Q9Y3S2 320 aaPredicted RBP6.62□□□□□ -1.35
SYCP1-209ENST00000613524 GDPD2Q9HCC8 539 aa6.62□□□□□ -1.35
SYCP1-209ENST00000613524 ERBB3P21860 1342 aa6.62□□□□□ -1.35
SYCP1-209ENST00000613524 CPSF1Q10570 1443 aaKnown RBP6.61□□□□□ -1.35
SYCP1-209ENST00000613524 U2AF1L5P0DN76 240 aaPredicted RBP6.61□□□□□ -1.35
SYCP1-209ENST00000613524 U2AF1Q01081 240 aaKnown RBP eCLIP6.61□□□□□ -1.35
SYCP1-209ENST00000613524 EZH2Q15910 746 aaKnown RBP6.61□□□□□ -1.35
SYCP1-209ENST00000613524 CCDC146Q8IYE0 955 aa6.61□□□□□ -1.35
SYCP1-209ENST00000613524 ADGRB2O60241 1585 aa6.61□□□□□ -1.35
SYCP1-209ENST00000613524 WDR17Q8IZU2 1322 aa6.61□□□□□ -1.35
SYCP1-209ENST00000613524 SSH2Q76I76 1423 aa6.61□□□□□ -1.35
SYCP1-209ENST00000613524 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.61□□□□□ -1.35
SYCP1-209ENST00000613524 FLIIQ13045 1269 aa6.61□□□□□ -1.35
SYCP1-209ENST00000613524 IP6K1Q92551 441 aa6.61□□□□□ -1.35
SYCP1-209ENST00000613524 CCDC97Q96F63 343 aaPredicted RBP6.61□□□□□ -1.35
SYCP1-209ENST00000613524 PIK3C2AO00443 1686 aa6.61□□□□□ -1.35
SYCP1-209ENST00000613524 SHPRHQ149N8 1683 aa6.61□□□□□ -1.35
SYCP1-209ENST00000613524 IL2RBP14784 551 aa6.6□□□□□ -1.35
SYCP1-209ENST00000613524 EIF4A2Q14240 407 aaKnown RBP6.6□□□□□ -1.35
SYCP1-209ENST00000613524 R3HDM1Q15032 1099 aaKnown RBP6.6□□□□□ -1.35
SYCP1-209ENST00000613524 MARCH10Q8NA82 808 aaPredicted RBP6.6□□□□□ -1.35
SYCP1-209ENST00000613524 EYA1Q99502 592 aa6.6□□□□□ -1.35
SYCP1-209ENST00000613524 RRP7AQ9Y3A4 280 aaKnown RBP6.6□□□□□ -1.35
SYCP1-209ENST00000613524 USP19O94966 1318 aa6.6□□□□□ -1.35
SYCP1-209ENST00000613524 RGPD5Q99666 1765 aa6.6□□□□□ -1.35
SYCP1-209ENST00000613524 MDM2Q00987 491 aaPredicted RBP6.6□□□□□ -1.35
SYCP1-209ENST00000613524 MAP2K5Q13163 448 aa6.6□□□□□ -1.35
SYCP1-209ENST00000613524 COG6Q9Y2V7 657 aa6.6□□□□□ -1.35
SYCP1-209ENST00000613524 PTCD1O75127 700 aaKnown RBP6.59□□□□□ -1.35
SYCP1-209ENST00000613524 TATP17735 454 aaPredicted RBP6.59□□□□□ -1.35
SYCP1-209ENST00000613524 CDHR5Q9HBB8 845 aa6.59□□□□□ -1.35
SYCP1-209ENST00000613524 OXER1Q8TDS5 423 aa6.59□□□□□ -1.35
SYCP1-209ENST00000613524 COL5A2P05997 1499 aaPredicted RBP6.59□□□□□ -1.35
SYCP1-209ENST00000613524 SLIT2O94813 1529 aa6.59□□□□□ -1.36
SYCP1-209ENST00000613524 TRPM3Q9HCF6 1732 aaPredicted RBP6.59□□□□□ -1.36
SYCP1-209ENST00000613524 A6NJR5 290 aa6.58□□□□□ -1.36
SYCP1-209ENST00000613524 PHF14O94880 888 aa6.58□□□□□ -1.36
SYCP1-209ENST00000613524 DCTN1Q14203 1278 aa6.58□□□□□ -1.36
SYCP1-209ENST00000613524 ZCRB1Q8TBF4 217 aaKnown RBP6.58□□□□□ -1.36
SYCP1-209ENST00000613524 PDGFDQ9GZP0 370 aaPredicted RBP6.58□□□□□ -1.36
SYCP1-209ENST00000613524 LAS1LQ9Y4W2 734 aaKnown RBP6.58□□□□□ -1.36
SYCP1-209ENST00000613524 ATRNO75882 1429 aa6.58□□□□□ -1.36
SYCP1-209ENST00000613524 PDIA6Q15084 440 aa6.58□□□□□ -1.36
SYCP1-209ENST00000613524 AMHR2Q16671 573 aa6.58□□□□□ -1.36
SYCP1-209ENST00000613524 ZNF530Q6P9A1 599 aaPredicted RBP6.58□□□□□ -1.36
SYCP1-209ENST00000613524 FAM9BQ8IZU0 186 aa6.58□□□□□ -1.36
SYCP1-209ENST00000613524 BAG6P46379 1132 aa6.58□□□□□ -1.36
SYCP1-209ENST00000613524 THUMPD2Q9BTF0 503 aaKnown RBP6.58□□□□□ -1.36
SYCP1-209ENST00000613524 CARD10Q9BWT7 1032 aa6.58□□□□□ -1.36
SYCP1-209ENST00000613524 SUPT16HQ9Y5B9 1047 aaKnown RBP6.58□□□□□ -1.36
SYCP1-209ENST00000613524 TOPAZ1Q8N9V7 1692 aa6.57□□□□□ -1.36
SYCP1-209ENST00000613524 ALS2Q96Q42 1657 aa6.57□□□□□ -1.36
SYCP1-209ENST00000613524 AATKQ6ZMQ8 1374 aa6.57□□□□□ -1.36
SYCP1-209ENST00000613524 CRB1P82279 1406 aa6.57□□□□□ -1.36
SYCP1-209ENST00000613524 SMG6Q86US8 1419 aaKnown RBP6.57□□□□□ -1.36
SYCP1-209ENST00000613524 DIAPH1O60610 1272 aaKnown RBP6.57□□□□□ -1.36
SYCP1-209ENST00000613524 MIS18AQ9NYP9 233 aa6.57□□□□□ -1.36
SYCP1-209ENST00000613524 GLI3P10071 1580 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms