RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 C8orf58Q8NAV2 365 aa22.65■■□□□ 1.22
SREK1-216ENST00000612404 TSPYL6Q8N831 410 aa22.64■■□□□ 1.22
SREK1-216ENST00000612404 KRT24Q2M2I5 525 aa22.64■■□□□ 1.21
SREK1-216ENST00000612404 GLI3P10071 1580 aa22.63■■□□□ 1.21
SREK1-216ENST00000612404 TWISTNBQ3B726 338 aaPredicted RBP22.63■■□□□ 1.21
SREK1-216ENST00000612404 SIPA1L3O60292 1781 aaPredicted RBP22.63■■□□□ 1.21
SREK1-216ENST00000612404 ERVV-2B6SEH9 535 aa22.62■■□□□ 1.21
SREK1-216ENST00000612404 RARSP54136 660 aaKnown RBP22.62■■□□□ 1.21
SREK1-216ENST00000612404 MRC1P22897 1456 aa22.61■■□□□ 1.21
SREK1-216ENST00000612404 BCAR3O75815 825 aa22.61■■□□□ 1.21
SREK1-216ENST00000612404 NEFLP07196 543 aa22.61■■□□□ 1.21
SREK1-216ENST00000612404 KCNQ3O43525 872 aa22.6■■□□□ 1.21
SREK1-216ENST00000612404 VAMP4O75379 141 aa22.6■■□□□ 1.21
SREK1-216ENST00000612404 BCL2L13Q9BXK5 485 aa22.6■■□□□ 1.21
SREK1-216ENST00000612404 KDM3BQ7LBC6 1761 aa22.6■■□□□ 1.21
SREK1-216ENST00000612404 ZNF772Q68DY9 489 aaPredicted RBP22.6■■□□□ 1.21
SREK1-216ENST00000612404 MARCH10Q8NA82 808 aaPredicted RBP22.6■■□□□ 1.21
SREK1-216ENST00000612404 RRP1P56182 461 aaKnown RBP22.59■■□□□ 1.21
SREK1-216ENST00000612404 KAT6BQ8WYB5 2073 aa22.59■■□□□ 1.21
SREK1-216ENST00000612404 RNF123Q5XPI4 1314 aa22.58■■□□□ 1.21
SREK1-216ENST00000612404 SLC39A6Q13433 755 aa22.58■■□□□ 1.2
SREK1-216ENST00000612404 TOGARAM1Q9Y4F4 1720 aa22.58■■□□□ 1.2
SREK1-216ENST00000612404 THSD7AQ9UPZ6 1657 aa22.58■■□□□ 1.2
SREK1-216ENST00000612404 EIF4A1P60842 406 aaKnown RBP22.57■■□□□ 1.2
SREK1-216ENST00000612404 IRX6P78412 446 aaPredicted RBP22.57■■□□□ 1.2
SREK1-216ENST00000612404 SMC4Q9NTJ3 1288 aa22.57■■□□□ 1.2
SREK1-216ENST00000612404 GTF3C3Q9Y5Q9 886 aa22.57■■□□□ 1.2
SREK1-216ENST00000612404 PLIN1O60240 522 aa22.57■■□□□ 1.2
SREK1-216ENST00000612404 ZNF790Q6PG37 636 aa22.57■■□□□ 1.2
SREK1-216ENST00000612404 ZNF428Q96B54 188 aa22.57■■□□□ 1.2
SREK1-216ENST00000612404 TMOD3Q9NYL9 352 aa22.57■■□□□ 1.2
SREK1-216ENST00000612404 TTC5Q8N0Z6 440 aa22.56■■□□□ 1.2
SREK1-216ENST00000612404 SSH1Q8WYL5 1049 aa22.56■■□□□ 1.2
SREK1-216ENST00000612404 SYTL4Q96C24 671 aaPredicted RBP22.55■■□□□ 1.2
SREK1-216ENST00000612404 TCERG1O14776 1098 aaKnown RBP22.54■■□□□ 1.2
SREK1-216ENST00000612404 ONECUT3O60422 494 aaPredicted RBP22.54■■□□□ 1.2
SREK1-216ENST00000612404 ALDH1L2Q3SY69 923 aa22.54■■□□□ 1.2
SREK1-216ENST00000612404 SEPT12Q8IYM1 358 aa22.54■■□□□ 1.2
SREK1-216ENST00000612404 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.54■■□□□ 1.2
SREK1-216ENST00000612404 FRAT1Q92837 279 aaPredicted RBP22.54■■□□□ 1.2
SREK1-216ENST00000612404 CANXP27824 592 aaKnown RBP22.53■■□□□ 1.2
SREK1-216ENST00000612404 FKBP8Q14318 412 aa22.52■■□□□ 1.2
SREK1-216ENST00000612404 DOT1LQ8TEK3 1739 aa22.52■■□□□ 1.2
SREK1-216ENST00000612404 ITGB4P16144 1822 aa22.52■■□□□ 1.2
SREK1-216ENST00000612404 PRIM1P49642 420 aaKnown RBP22.52■■□□□ 1.2
SREK1-216ENST00000612404 PIGBQ92521 554 aa22.52■■□□□ 1.2
SREK1-216ENST00000612404 ACSBG1Q96GR2 724 aa22.51■■□□□ 1.19
SREK1-216ENST00000612404 RBM6P78332 1123 aaKnown RBP22.5■■□□□ 1.19
SREK1-216ENST00000612404 NECTIN2Q92692 538 aa22.5■■□□□ 1.19
SREK1-216ENST00000612404 SOS1Q07889 1333 aaPredicted RBP22.5■■□□□ 1.19
SREK1-216ENST00000612404 ZNF496Q96IT1 587 aaPredicted RBP22.49■■□□□ 1.19
SREK1-216ENST00000612404 FMNL2Q96PY5 1086 aa22.49■■□□□ 1.19
SREK1-216ENST00000612404 BCL9O00512 1426 aa22.48■■□□□ 1.19
SREK1-216ENST00000612404 GIGYF1O75420 1035 aaPredicted RBP22.48■■□□□ 1.19
SREK1-216ENST00000612404 EIF2S2P20042 333 aaKnown RBP22.48■■□□□ 1.19
SREK1-216ENST00000612404 HOXB7P09629 217 aa22.48■■□□□ 1.19
SREK1-216ENST00000612404 FAM182BQ5T319 152 aa22.48■■□□□ 1.19
SREK1-216ENST00000612404 HDGFL1Q5TGJ6 251 aa22.48■■□□□ 1.19
SREK1-216ENST00000612404 MRPL50Q8N5N7 158 aaKnown RBP22.48■■□□□ 1.19
SREK1-216ENST00000612404 HEG1Q9ULI3 1381 aa22.47■■□□□ 1.19
SREK1-216ENST00000612404 CCDC30Q5VVM6 783 aa22.47■■□□□ 1.19
SREK1-216ENST00000612404 KIF16BQ96L93 1317 aa22.47■■□□□ 1.19
SREK1-216ENST00000612404 STK31Q9BXU1 1019 aa22.46■■□□□ 1.19
SREK1-216ENST00000612404 ASAP1Q9ULH1 1129 aa22.46■■□□□ 1.19
SREK1-216ENST00000612404 NOB1Q9ULX3 412 aaKnown RBP22.46■■□□□ 1.19
SREK1-216ENST00000612404 PAPPAQ13219 1627 aa22.46■■□□□ 1.19
SREK1-216ENST00000612404 PRAMEF22A3QJZ6 481 aa22.46■■□□□ 1.19
SREK1-216ENST00000612404 PTCD1O75127 700 aaKnown RBP22.46■■□□□ 1.19
SREK1-216ENST00000612404 SLC4A2P04920 1241 aa22.45■■□□□ 1.18
SREK1-216ENST00000612404 C20orf194Q5TEA3 1177 aa22.45■■□□□ 1.18
SREK1-216ENST00000612404 ATG3Q9NT62 314 aa22.45■■□□□ 1.18
SREK1-216ENST00000612404 SNRPA1P09661 255 aaKnown RBP22.44■■□□□ 1.18
SREK1-216ENST00000612404 RXRBP28702 533 aa22.44■■□□□ 1.18
SREK1-216ENST00000612404 BRPF1P55201 1214 aaPredicted RBP22.44■■□□□ 1.18
SREK1-216ENST00000612404 ZKSCAN2Q63HK3 967 aa22.44■■□□□ 1.18
SREK1-216ENST00000612404 CHMP4AQ9BY43 222 aa22.44■■□□□ 1.18
SREK1-216ENST00000612404 RGS17Q9UGC6 210 aaPredicted RBP22.44■■□□□ 1.18
SREK1-216ENST00000612404 KCNQ2O43526 872 aa22.43■■□□□ 1.18
SREK1-216ENST00000612404 UBR2Q8IWV8 1755 aa22.43■■□□□ 1.18
SREK1-216ENST00000612404 IPO8O15397 1037 aaKnown RBP22.43■■□□□ 1.18
SREK1-216ENST00000612404 KCPQ6ZWJ8 1503 aa22.42■■□□□ 1.18
SREK1-216ENST00000612404 C5P01031 1676 aa22.42■■□□□ 1.18
SREK1-216ENST00000612404 KRT27Q7Z3Y8 459 aa22.41■■□□□ 1.18
SREK1-216ENST00000612404 CLUAP1Q96AJ1 413 aa22.41■■□□□ 1.18
SREK1-216ENST00000612404 RBM42Q9BTD8 480 aaKnown RBP22.41■■□□□ 1.18
SREK1-216ENST00000612404 EP400Q96L91 3159 aa22.41■■□□□ 1.18
SREK1-216ENST00000612404 BRWD3Q6RI45 1802 aa22.41■■□□□ 1.18
SREK1-216ENST00000612404 TNNQ9UQP3 1299 aa22.4■■□□□ 1.18
SREK1-216ENST00000612404 POTEAQ6S8J7 498 aa22.4■■□□□ 1.18
SREK1-216ENST00000612404 ATF7IPQ6VMQ6 1270 aa22.4■■□□□ 1.18
SREK1-216ENST00000612404 CHPF2Q9P2E5 772 aa22.4■■□□□ 1.18
SREK1-216ENST00000612404 TRIM27P14373 513 aa22.39■■□□□ 1.18
SREK1-216ENST00000612404 FTSJ3Q8IY81 847 aaKnown RBP22.39■■□□□ 1.18
SREK1-216ENST00000612404 PANK1Q8TE04 598 aa22.39■■□□□ 1.18
SREK1-216ENST00000612404 PDE3AQ14432 1141 aa22.39■■□□□ 1.17
SREK1-216ENST00000612404 USP16Q9Y5T5 823 aa22.39■■□□□ 1.17
SREK1-216ENST00000612404 ILDR1Q86SU0 546 aaPredicted RBP22.37■■□□□ 1.17
SREK1-216ENST00000612404 DZIP1LQ8IYY4 767 aaKnown RBP22.37■■□□□ 1.17
SREK1-216ENST00000612404 DBF4Q9UBU7 674 aaPredicted RBP22.37■■□□□ 1.17
SREK1-216ENST00000612404 G2E3Q7L622 706 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms