RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 ANKLE2Q86XL3 938 aa10.44□□□□□ -0.74
LIG4-204ENST00000611712 TMX3Q96JJ7 454 aa10.44□□□□□ -0.74
LIG4-204ENST00000611712 CYP46A1Q9Y6A2 500 aa10.44□□□□□ -0.74
LIG4-204ENST00000611712 FLT4P35916 1363 aa10.44□□□□□ -0.74
LIG4-204ENST00000611712 PI4KAP2A4QPH2 592 aa10.44□□□□□ -0.74
LIG4-204ENST00000611712 ATP8B2P98198 1209 aa10.44□□□□□ -0.74
LIG4-204ENST00000611712 PI4KAP1Q8N8J0 262 aa10.44□□□□□ -0.74
LIG4-204ENST00000611712 R3HCC1Q9Y3T6 440 aaKnown RBP10.44□□□□□ -0.74
LIG4-204ENST00000611712 METP08581 1390 aa10.44□□□□□ -0.74
LIG4-204ENST00000611712 GSPT1P15170 499 aaKnown RBP10.44□□□□□ -0.74
LIG4-204ENST00000611712 BRPF1P55201 1214 aaPredicted RBP10.44□□□□□ -0.74
LIG4-204ENST00000611712 ABCA9Q8IUA7 1624 aa10.44□□□□□ -0.74
LIG4-204ENST00000611712 ZGPATQ8N5A5 531 aaKnown RBP10.44□□□□□ -0.74
LIG4-204ENST00000611712 JAKMIP1Q96N16 626 aaKnown RBP10.44□□□□□ -0.74
LIG4-204ENST00000611712 ESYT1Q9BSJ8 1104 aa10.44□□□□□ -0.74
LIG4-204ENST00000611712 CCDC39Q9UFE4 941 aa10.44□□□□□ -0.74
LIG4-204ENST00000611712 GLRX3O76003 335 aaKnown RBP10.43□□□□□ -0.74
LIG4-204ENST00000611712 MYL6BP14649 208 aa10.43□□□□□ -0.74
LIG4-204ENST00000611712 PSMA5P28066 241 aa10.43□□□□□ -0.74
LIG4-204ENST00000611712 LARP6Q9BRS8 491 aaKnown RBP10.43□□□□□ -0.74
LIG4-204ENST00000611712 KIF3AQ9Y496 699 aa10.43□□□□□ -0.74
LIG4-204ENST00000611712 PPRC1Q5VV67 1664 aaKnown RBP10.43□□□□□ -0.74
LIG4-204ENST00000611712 GLI2P10070 1586 aa10.43□□□□□ -0.74
LIG4-204ENST00000611712 INO80Q9ULG1 1556 aaPredicted RBP10.43□□□□□ -0.74
LIG4-204ENST00000611712 SETBP1Q9Y6X0 1596 aa10.43□□□□□ -0.74
LIG4-204ENST00000611712 MPNDQ8N594 471 aa10.43□□□□□ -0.74
LIG4-204ENST00000611712 KCNH5Q8NCM2 988 aa10.43□□□□□ -0.74
LIG4-204ENST00000611712 NEUROD6Q96NK8 337 aa10.43□□□□□ -0.74
LIG4-204ENST00000611712 CASTP20810 708 aaKnown RBP10.43□□□□□ -0.74
LIG4-204ENST00000611712 BICD2Q8TD16 824 aa10.43□□□□□ -0.74
LIG4-204ENST00000611712 RBM27Q9P2N5 1060 aaKnown RBP10.43□□□□□ -0.74
LIG4-204ENST00000611712 PIK3R4Q99570 1358 aa10.42□□□□□ -0.74
LIG4-204ENST00000611712 ZNF853P0CG23 659 aa10.42□□□□□ -0.74
LIG4-204ENST00000611712 ZSCAN30Q86W11 494 aa10.42□□□□□ -0.74
LIG4-204ENST00000611712 SIRT2Q8IXJ6 389 aa10.42□□□□□ -0.74
LIG4-204ENST00000611712 GDPD2Q9HCC8 539 aa10.42□□□□□ -0.74
LIG4-204ENST00000611712 ARHGAP31Q2M1Z3 1444 aa10.42□□□□□ -0.74
LIG4-204ENST00000611712 HIP1O00291 1037 aa10.42□□□□□ -0.74
LIG4-204ENST00000611712 GNL2Q13823 731 aaKnown RBP10.42□□□□□ -0.74
LIG4-204ENST00000611712 PROSER2Q86WR7 435 aaPredicted RBP10.42□□□□□ -0.74
LIG4-204ENST00000611712 DDX54Q8TDD1 881 aaKnown RBP10.42□□□□□ -0.74
LIG4-204ENST00000611712 FAM13BQ9NYF5 915 aa10.42□□□□□ -0.74
LIG4-204ENST00000611712 SPG7Q9UQ90 795 aa10.42□□□□□ -0.74
LIG4-204ENST00000611712 LMTK2Q8IWU2 1503 aa10.42□□□□□ -0.74
LIG4-204ENST00000611712 RHPN1Q8TCX5 695 aa10.42□□□□□ -0.74
LIG4-204ENST00000611712 PDRG1Q9NUG6 133 aa10.42□□□□□ -0.74
LIG4-204ENST00000611712 QRICH2Q9H0J4 1663 aa10.42□□□□□ -0.74
LIG4-204ENST00000611712 ZC3H6P61129 1189 aaKnown RBP10.41□□□□□ -0.74
LIG4-204ENST00000611712 DNAJC2Q99543 621 aaKnown RBP10.41□□□□□ -0.74
LIG4-204ENST00000611712 DBF4Q9UBU7 674 aaPredicted RBP10.41□□□□□ -0.74
LIG4-204ENST00000611712 TULP4Q9NRJ4 1543 aa10.41□□□□□ -0.74
LIG4-204ENST00000611712 NRDCO43847 1150 aa10.41□□□□□ -0.74
LIG4-204ENST00000611712 FOSBP53539 338 aa10.41□□□□□ -0.74
LIG4-204ENST00000611712 ZSCAN23Q3MJ62 389 aa10.41□□□□□ -0.74
LIG4-204ENST00000611712 PRPF40BQ6NWY9 871 aaKnown RBP10.41□□□□□ -0.74
LIG4-204ENST00000611712 CHPF2Q9P2E5 772 aa10.41□□□□□ -0.74
LIG4-204ENST00000611712 PLEKHG3A1L390 1219 aa10.4□□□□□ -0.74
LIG4-204ENST00000611712 SF3A1Q15459 793 aaKnown RBP10.4□□□□□ -0.74
LIG4-204ENST00000611712 AATKQ6ZMQ8 1374 aa10.4□□□□□ -0.74
LIG4-204ENST00000611712 FAM135BQ49AJ0 1406 aa10.4□□□□□ -0.74
LIG4-204ENST00000611712 ATF3P18847 181 aa10.4□□□□□ -0.74
LIG4-204ENST00000611712 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.4□□□□□ -0.74
LIG4-204ENST00000611712 TATP17735 454 aaPredicted RBP10.4□□□□□ -0.74
LIG4-204ENST00000611712 PDCP20941 246 aa10.4□□□□□ -0.74
LIG4-204ENST00000611712 CCDC83Q8IWF9 413 aa10.4□□□□□ -0.74
LIG4-204ENST00000611712 RRAGDQ9NQL2 400 aaPredicted RBP10.4□□□□□ -0.74
LIG4-204ENST00000611712 ATP7BP35670 1465 aa10.4□□□□□ -0.74
LIG4-204ENST00000611712 CD2BP2O95400 341 aaKnown RBP10.4□□□□□ -0.75
LIG4-204ENST00000611712 STK3Q13188 491 aa10.4□□□□□ -0.75
LIG4-204ENST00000611712 LARP1BQ659C4 914 aaKnown RBP10.4□□□□□ -0.75
LIG4-204ENST00000611712 PHAXQ9H814 394 aaKnown RBP10.4□□□□□ -0.75
LIG4-204ENST00000611712 AMOTQ4VCS5 1084 aa10.39□□□□□ -0.75
LIG4-204ENST00000611712 BLOC1S2Q6QNY1 142 aa10.39□□□□□ -0.75
LIG4-204ENST00000611712 SIRT1Q96EB6 747 aa10.39□□□□□ -0.75
LIG4-204ENST00000611712 RTL1A6NKG5 1358 aa10.39□□□□□ -0.75
LIG4-204ENST00000611712 KIAA0232Q92628 1395 aa10.39□□□□□ -0.75
LIG4-204ENST00000611712 LETM1O95202 739 aaPredicted RBP10.39□□□□□ -0.75
LIG4-204ENST00000611712 HOXC9P31274 260 aa10.39□□□□□ -0.75
LIG4-204ENST00000611712 CLCN1P35523 988 aa10.39□□□□□ -0.75
LIG4-204ENST00000611712 CCDC8Q9H0W5 538 aaPredicted RBP10.39□□□□□ -0.75
LIG4-204ENST00000611712 BOLA2Q9H3K6 86 aa10.39□□□□□ -0.75
LIG4-204ENST00000611712 LIMCH1Q9UPQ0 1083 aa10.39□□□□□ -0.75
LIG4-204ENST00000611712 MAP3K2Q9Y2U5 619 aa10.39□□□□□ -0.75
LIG4-204ENST00000611712 KIAA1210Q9ULL0 1709 aa10.39□□□□□ -0.75
LIG4-204ENST00000611712 PNMA6EA0A0J9YXQ4 647 aa10.39□□□□□ -0.75
LIG4-204ENST00000611712 GOLGA6L19H0YKK7 550 aa10.39□□□□□ -0.75
LIG4-204ENST00000611712 CHMLP26374 656 aa10.39□□□□□ -0.75
LIG4-204ENST00000611712 LTKP29376 864 aa10.39□□□□□ -0.75
LIG4-204ENST00000611712 ECHDC1Q9NTX5 307 aa10.39□□□□□ -0.75
LIG4-204ENST00000611712 NRXN1Q9ULB1 1477 aa10.39□□□□□ -0.75
LIG4-204ENST00000611712 KIF24Q5T7B8 1368 aa10.38□□□□□ -0.75
LIG4-204ENST00000611712 PNPLA6Q8IY17 1366 aa10.38□□□□□ -0.75
LIG4-204ENST00000611712 ZSCAN31Q96LW9 406 aaPredicted RBP10.38□□□□□ -0.75
LIG4-204ENST00000611712 PRR36Q9H6K5 1346 aa10.38□□□□□ -0.75
LIG4-204ENST00000611712 TMEM2Q9UHN6 1383 aa10.38□□□□□ -0.75
LIG4-204ENST00000611712 BECN2A8MW95 431 aa10.38□□□□□ -0.75
LIG4-204ENST00000611712 KCNA6P17658 529 aa10.38□□□□□ -0.75
LIG4-204ENST00000611712 ANAPC15P60006 121 aa10.38□□□□□ -0.75
LIG4-204ENST00000611712 SBNO1A3KN83 1393 aa10.38□□□□□ -0.75
LIG4-204ENST00000611712 FERMT3Q86UX7 667 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms