RNA–Protein interactions for RNA: ENST00000611127.4

FAM228B-205, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene FAM228B, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-205ENST00000611127 BRPF1P55201 1214 aaPredicted RBP12□□□□□ -0.49
FAM228B-205ENST00000611127 CDV3Q9UKY7 258 aaKnown RBP12□□□□□ -0.49
FAM228B-205ENST00000611127 RIMS1Q86UR5 1692 aaKnown RBP12□□□□□ -0.49
FAM228B-205ENST00000611127 FBXO31Q5XUX0 539 aaPredicted RBP11.99□□□□□ -0.49
FAM228B-205ENST00000611127 RTEL1-TNFRSF6BF6WH68 1400 aa11.99□□□□□ -0.49
FAM228B-205ENST00000611127 ABCA6Q8N139 1617 aa11.99□□□□□ -0.49
FAM228B-205ENST00000611127 SUPT6HQ7KZ85 1726 aaKnown RBP11.98□□□□□ -0.49
FAM228B-205ENST00000611127 ATP7AQ04656 1500 aa11.98□□□□□ -0.49
FAM228B-205ENST00000611127 MAGEB6P1A0A0J9YX57 407 aa11.98□□□□□ -0.49
FAM228B-205ENST00000611127 USP17L8P0C7I0 530 aa11.98□□□□□ -0.49
FAM228B-205ENST00000611127 TSPY4P0CV99 314 aa11.98□□□□□ -0.49
FAM228B-205ENST00000611127 TSPY10P0CW01 314 aa11.98□□□□□ -0.49
FAM228B-205ENST00000611127 TIMP2P16035 220 aa11.98□□□□□ -0.49
FAM228B-205ENST00000611127 GRM5P41594 1212 aa11.98□□□□□ -0.49
FAM228B-205ENST00000611127 WDR4P57081 412 aaKnown RBP11.98□□□□□ -0.49
FAM228B-205ENST00000611127 KLF16Q9BXK1 252 aaPredicted RBP11.98□□□□□ -0.49
FAM228B-205ENST00000611127 KIDINS220Q9ULH0 1771 aa11.97□□□□□ -0.49
FAM228B-205ENST00000611127 A2MP01023 1474 aa11.97□□□□□ -0.49
FAM228B-205ENST00000611127 LMTK3Q96Q04 1460 aa11.97□□□□□ -0.49
FAM228B-205ENST00000611127 NR6A1Q15406 480 aa11.97□□□□□ -0.49
FAM228B-205ENST00000611127 IL27Q8NEV9 243 aa11.97□□□□□ -0.49
FAM228B-205ENST00000611127 ARHGAP9Q9BRR9 750 aa11.97□□□□□ -0.49
FAM228B-205ENST00000611127 CNTLNQ9NXG0 1405 aa11.96□□□□□ -0.49
FAM228B-205ENST00000611127 PTK2Q05397 1052 aa11.96□□□□□ -0.49
FAM228B-205ENST00000611127 ERFEQ4G0M1 354 aa11.96□□□□□ -0.49
FAM228B-205ENST00000611127 VASH1Q7L8A9 365 aaPredicted RBP11.96□□□□□ -0.49
FAM228B-205ENST00000611127 CAMSAP2Q08AD1 1489 aa11.95□□□□□ -0.5
FAM228B-205ENST00000611127 CCDC141Q6ZP82 1450 aa11.95□□□□□ -0.5
FAM228B-205ENST00000611127 MIA2Q96PC5 1412 aa11.95□□□□□ -0.5
FAM228B-205ENST00000611127 DHX29Q7Z478 1369 aaKnown RBP11.95□□□□□ -0.5
FAM228B-205ENST00000611127 HSPA2P54652 639 aa11.95□□□□□ -0.5
FAM228B-205ENST00000611127 SCARF1Q14162 830 aa11.95□□□□□ -0.5
FAM228B-205ENST00000611127 GGT6Q6P531 493 aa11.95□□□□□ -0.5
FAM228B-205ENST00000611127 TRIM46Q7Z4K8 759 aa11.95□□□□□ -0.5
FAM228B-205ENST00000611127 INO80Q9ULG1 1556 aaPredicted RBP11.94□□□□□ -0.5
FAM228B-205ENST00000611127 BMP1P13497 986 aa11.94□□□□□ -0.5
FAM228B-205ENST00000611127 SNRPBP14678 240 aaKnown RBP11.94□□□□□ -0.5
FAM228B-205ENST00000611127 TREML4Q6UXN2 200 aa11.94□□□□□ -0.5
FAM228B-205ENST00000611127 CARD14Q9BXL6 1004 aa11.94□□□□□ -0.5
FAM228B-205ENST00000611127 FER1L4A9Z1Z3 1794 aa11.94□□□□□ -0.5
FAM228B-205ENST00000611127 MYOM3Q5VTT5 1437 aa11.94□□□□□ -0.5
FAM228B-205ENST00000611127 ZMYM3Q14202 1370 aa11.93□□□□□ -0.5
FAM228B-205ENST00000611127 FSHRP23945 695 aa11.93□□□□□ -0.5
FAM228B-205ENST00000611127 MRPL14Q6P1L8 145 aaKnown RBP11.93□□□□□ -0.5
FAM228B-205ENST00000611127 ZBTB33Q86T24 672 aa11.93□□□□□ -0.5
FAM228B-205ENST00000611127 SLC10A4Q96EP9 437 aa11.93□□□□□ -0.5
FAM228B-205ENST00000611127 EMILIN1Q9Y6C2 1016 aa11.93□□□□□ -0.5
FAM228B-205ENST00000611127 ZIC2O95409 532 aaPredicted RBP11.92□□□□□ -0.5
FAM228B-205ENST00000611127 NR3C2P08235 984 aa11.92□□□□□ -0.5
FAM228B-205ENST00000611127 KIF3BO15066 747 aa11.91□□□□□ -0.5
FAM228B-205ENST00000611127 UHRF1BP1Q6BDS2 1440 aa11.91□□□□□ -0.5
FAM228B-205ENST00000611127 PLXNC1O60486 1568 aa11.91□□□□□ -0.5
FAM228B-205ENST00000611127 SOCS7O14512 581 aa11.9□□□□□ -0.5
FAM228B-205ENST00000611127 ARHGEF5Q12774 1597 aa11.9□□□□□ -0.5
FAM228B-205ENST00000611127 CCDC116Q8IYX3 515 aa11.9□□□□□ -0.5
FAM228B-205ENST00000611127 ITPKCQ96DU7 683 aa11.9□□□□□ -0.5
FAM228B-205ENST00000611127 NPATQ14207 1427 aa11.88□□□□□ -0.51
FAM228B-205ENST00000611127 WFS1O76024 890 aa11.88□□□□□ -0.51
FAM228B-205ENST00000611127 UPP2O95045 317 aa11.88□□□□□ -0.51
FAM228B-205ENST00000611127 DHX9Q08211 1270 aaKnown RBP11.88□□□□□ -0.51
FAM228B-205ENST00000611127 NBPF20Q3BBV1 942 aa11.88□□□□□ -0.51
FAM228B-205ENST00000611127 NPAS3Q8IXF0 933 aa11.88□□□□□ -0.51
FAM228B-205ENST00000611127 ZFP42Q96MM3 310 aa11.88□□□□□ -0.51
FAM228B-205ENST00000611127 HMX1Q9NP08 348 aaPredicted RBP11.88□□□□□ -0.51
FAM228B-205ENST00000611127 LCE2AQ5TA79 106 aaPredicted RBP11.87□□□□□ -0.51
FAM228B-205ENST00000611127 BANK1Q8NDB2 785 aa11.87□□□□□ -0.51
FAM228B-205ENST00000611127 PGPEP1Q9NXJ5 209 aa11.87□□□□□ -0.51
FAM228B-205ENST00000611127 ADGBQ8N7X0 1667 aa11.87□□□□□ -0.51
FAM228B-205ENST00000611127 WASHC2CQ9Y4E1 1318 aa11.86□□□□□ -0.51
FAM228B-205ENST00000611127 TERTO14746 1132 aaKnown RBP11.86□□□□□ -0.51
FAM228B-205ENST00000611127 MEIOBQ8N635 442 aa11.86□□□□□ -0.51
FAM228B-205ENST00000611127 KCTD15Q96SI1 283 aaPredicted RBP11.86□□□□□ -0.51
FAM228B-205ENST00000611127 ZFAND3Q9H8U3 227 aa11.86□□□□□ -0.51
FAM228B-205ENST00000611127 APBB1O00213 710 aa11.85□□□□□ -0.51
FAM228B-205ENST00000611127 NFX1Q12986 1120 aaKnown RBP11.85□□□□□ -0.51
FAM228B-205ENST00000611127 ADAM32Q8TC27 787 aa11.85□□□□□ -0.51
FAM228B-205ENST00000611127 EPS8L1Q8TE68 723 aa11.85□□□□□ -0.51
FAM228B-205ENST00000611127 TRIM52Q96A61 297 aa11.85□□□□□ -0.51
FAM228B-205ENST00000611127 FGD6Q6ZV73 1430 aa11.85□□□□□ -0.51
FAM228B-205ENST00000611127 PTPRKQ15262 1439 aa11.84□□□□□ -0.51
FAM228B-205ENST00000611127 C3P01024 1663 aa11.84□□□□□ -0.51
FAM228B-205ENST00000611127 PREX1Q8TCU6 1659 aa11.84□□□□□ -0.51
FAM228B-205ENST00000611127 SLC16A10Q8TF71 515 aa11.83□□□□□ -0.52
FAM228B-205ENST00000611127 PURBQ96QR8 312 aaKnown RBP11.83□□□□□ -0.52
FAM228B-205ENST00000611127 OCSTAMPQ9BR26 566 aa11.83□□□□□ -0.52
FAM228B-205ENST00000611127 TSEN34Q9BSV6 310 aaKnown RBP11.83□□□□□ -0.52
FAM228B-205ENST00000611127 TRIM34Q9BYJ4 488 aa11.83□□□□□ -0.52
FAM228B-205ENST00000611127 NXF1Q9UBU9 619 aaKnown RBP11.83□□□□□ -0.52
FAM228B-205ENST00000611127 ABCC5O15440 1437 aa11.83□□□□□ -0.52
FAM228B-205ENST00000611127 MAST1Q9Y2H9 1570 aa11.83□□□□□ -0.52
FAM228B-205ENST00000611127 MROH2AA6NES4 1674 aa11.82□□□□□ -0.52
FAM228B-205ENST00000611127 LINC00528Q8N1L1 170 aa11.82□□□□□ -0.52
FAM228B-205ENST00000611127 ZNF592Q92610 1267 aa11.82□□□□□ -0.52
FAM228B-205ENST00000611127 RRP7BPQ9NSQ0 103 aa11.82□□□□□ -0.52
FAM228B-205ENST00000611127 TCOF1Q13428 1488 aaKnown RBP11.82□□□□□ -0.52
FAM228B-205ENST00000611127 FAM135AQ9P2D6 1515 aa11.81□□□□□ -0.52
FAM228B-205ENST00000611127 PPP1R26Q5T8A7 1209 aaPredicted RBP11.81□□□□□ -0.52
FAM228B-205ENST00000611127 SHANK2Q9UPX8 1470 aa11.81□□□□□ -0.52
FAM228B-205ENST00000611127 KIF15Q9NS87 1388 aa11.8□□□□□ -0.52
FAM228B-205ENST00000611127 DAPK1P53355 1430 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms