RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 NCAPD2Q15021 1401 aa23.11■■□□□ 1.29
SNAPC3-207ENST00000610884 ZBTB40Q9NUA8 1239 aa23.11■■□□□ 1.29
SNAPC3-207ENST00000610884 ZBTB7BO15156 539 aaPredicted RBP23.1■■□□□ 1.29
SNAPC3-207ENST00000610884 PIP4K2AP48426 406 aaPredicted RBP23.1■■□□□ 1.29
SNAPC3-207ENST00000610884 HDGFL1Q5TGJ6 251 aa23.1■■□□□ 1.29
SNAPC3-207ENST00000610884 NBR1Q14596 966 aa23.1■■□□□ 1.29
SNAPC3-207ENST00000610884 SPG7Q9UQ90 795 aa23.1■■□□□ 1.29
SNAPC3-207ENST00000610884 COL5A2P05997 1499 aaPredicted RBP23.1■■□□□ 1.29
SNAPC3-207ENST00000610884 NHSL1Q5SYE7 1610 aa23.1■■□□□ 1.29
SNAPC3-207ENST00000610884 BRPF1P55201 1214 aaPredicted RBP23.09■■□□□ 1.29
SNAPC3-207ENST00000610884 ANP32AP39687 249 aaKnown RBP23.09■■□□□ 1.29
SNAPC3-207ENST00000610884 FAM208AQ9UK61 1670 aaKnown RBP23.08■■□□□ 1.29
SNAPC3-207ENST00000610884 STK31Q9BXU1 1019 aa23.08■■□□□ 1.29
SNAPC3-207ENST00000610884 KDM6AO15550 1401 aaPredicted RBP23.07■■□□□ 1.28
SNAPC3-207ENST00000610884 FKBP5Q13451 457 aaPredicted RBP23.07■■□□□ 1.28
SNAPC3-207ENST00000610884 IFNL2Q8IZJ0 200 aa23.07■■□□□ 1.28
SNAPC3-207ENST00000610884 CHPF2Q9P2E5 772 aa23.07■■□□□ 1.28
SNAPC3-207ENST00000610884 MS4A1P11836 297 aa23.07■■□□□ 1.28
SNAPC3-207ENST00000610884 ABCC4O15439 1325 aa23.07■■□□□ 1.28
SNAPC3-207ENST00000610884 DEKP35659 375 aaKnown RBP23.06■■□□□ 1.28
SNAPC3-207ENST00000610884 AEBP2Q6ZN18 517 aaPredicted RBP23.06■■□□□ 1.28
SNAPC3-207ENST00000610884 PROSER3Q2NL68 480 aa23.06■■□□□ 1.28
SNAPC3-207ENST00000610884 ARHGAP45Q92619 1136 aa23.06■■□□□ 1.28
SNAPC3-207ENST00000610884 LRRC37A3O60309 1634 aa23.06■■□□□ 1.28
SNAPC3-207ENST00000610884 FLIIQ13045 1269 aa23.05■■□□□ 1.28
SNAPC3-207ENST00000610884 CCDC30Q5VVM6 783 aa23.05■■□□□ 1.28
SNAPC3-207ENST00000610884 ZCRB1Q8TBF4 217 aaKnown RBP23.05■■□□□ 1.28
SNAPC3-207ENST00000610884 API5Q9BZZ5 524 aaKnown RBP23.04■■□□□ 1.28
SNAPC3-207ENST00000610884 SLC52A2Q9HAB3 445 aa23.04■■□□□ 1.28
SNAPC3-207ENST00000610884 RGS12O14924 1447 aa23.04■■□□□ 1.28
SNAPC3-207ENST00000610884 LMO7Q8WWI1 1683 aa23.04■■□□□ 1.28
SNAPC3-207ENST00000610884 TOM1O60784 492 aa23.04■■□□□ 1.28
SNAPC3-207ENST00000610884 IL2RBP14784 551 aa23.03■■□□□ 1.28
SNAPC3-207ENST00000610884 IPO9Q96P70 1041 aaKnown RBP23.03■■□□□ 1.28
SNAPC3-207ENST00000610884 MEIS3Q99687 375 aa23.03■■□□□ 1.28
SNAPC3-207ENST00000610884 ABCA3Q99758 1704 aa23.03■■□□□ 1.28
SNAPC3-207ENST00000610884 KAT6BQ8WYB5 2073 aa23.03■■□□□ 1.28
SNAPC3-207ENST00000610884 VIRMAQ69YN4 1812 aaKnown RBP23.02■■□□□ 1.28
SNAPC3-207ENST00000610884 SIRT2Q8IXJ6 389 aa23.02■■□□□ 1.28
SNAPC3-207ENST00000610884 CARD10Q9BWT7 1032 aa23.02■■□□□ 1.28
SNAPC3-207ENST00000610884 GIGYF1O75420 1035 aaPredicted RBP23.01■■□□□ 1.27
SNAPC3-207ENST00000610884 ZNF790Q6PG37 636 aa23.01■■□□□ 1.27
SNAPC3-207ENST00000610884 ZNF496Q96IT1 587 aaPredicted RBP23.01■■□□□ 1.27
SNAPC3-207ENST00000610884 PDZRN3Q9UPQ7 1066 aa23.01■■□□□ 1.27
SNAPC3-207ENST00000610884 RWDD1Q9H446 243 aaPredicted RBP23.01■■□□□ 1.27
SNAPC3-207ENST00000610884 CABP4P57796 275 aa23■■□□□ 1.27
SNAPC3-207ENST00000610884 AIMP1Q12904 312 aaKnown RBP22.99■■□□□ 1.27
SNAPC3-207ENST00000610884 MYL6BP14649 208 aa22.99■■□□□ 1.27
SNAPC3-207ENST00000610884 DCAF5Q96JK2 942 aa22.99■■□□□ 1.27
SNAPC3-207ENST00000610884 PTCD1O75127 700 aaKnown RBP22.98■■□□□ 1.27
SNAPC3-207ENST00000610884 USP16Q9Y5T5 823 aa22.98■■□□□ 1.27
SNAPC3-207ENST00000610884 APBB1O00213 710 aa22.97■■□□□ 1.27
SNAPC3-207ENST00000610884 A0A0G2JS52 829 aa22.97■■□□□ 1.27
SNAPC3-207ENST00000610884 PDE4AP27815 886 aa22.97■■□□□ 1.27
SNAPC3-207ENST00000610884 INTS3Q68E01 1043 aaKnown RBP22.97■■□□□ 1.27
SNAPC3-207ENST00000610884 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.97■■□□□ 1.272e-7■■■■□ 23.1
SNAPC3-207ENST00000610884 CCDC9Q9Y3X0 531 aaKnown RBP22.97■■□□□ 1.27
SNAPC3-207ENST00000610884 OVOS2A0A0G2JMS6 1433 aa22.96■■□□□ 1.27
SNAPC3-207ENST00000610884 ZBTB47Q9UFB7 747 aaPredicted RBP22.96■■□□□ 1.27
SNAPC3-207ENST00000610884 PTPRCP08575 1304 aa22.96■■□□□ 1.27
SNAPC3-207ENST00000610884 PI4KAP2A4QPH2 592 aa22.95■■□□□ 1.26
SNAPC3-207ENST00000610884 NPM2Q86SE8 214 aaKnown RBP22.95■■□□□ 1.26
SNAPC3-207ENST00000610884 PI4KAP1Q8N8J0 262 aa22.95■■□□□ 1.26
SNAPC3-207ENST00000610884 BABAM1Q9NWV8 329 aa22.95■■□□□ 1.26
SNAPC3-207ENST00000610884 PHLPP1O60346 1717 aa22.94■■□□□ 1.26
SNAPC3-207ENST00000610884 LNPKQ9C0E8 428 aa22.93■■□□□ 1.26
SNAPC3-207ENST00000610884 PCDH11XQ9BZA7 1347 aa22.93■■□□□ 1.26
SNAPC3-207ENST00000610884 PCDH11YQ9BZA8 1340 aa22.93■■□□□ 1.26
SNAPC3-207ENST00000610884 TTC5Q8N0Z6 440 aa22.92■■□□□ 1.26
SNAPC3-207ENST00000610884 SYTL4Q96C24 671 aaPredicted RBP22.92■■□□□ 1.26
SNAPC3-207ENST00000610884 C8orf37Q96NL8 207 aa22.92■■□□□ 1.26
SNAPC3-207ENST00000610884 KDM3BQ7LBC6 1761 aa22.91■■□□□ 1.26
SNAPC3-207ENST00000610884 HDAC1Q13547 482 aaPredicted RBP22.9■■□□□ 1.26
SNAPC3-207ENST00000610884 AHDC1Q5TGY3 1603 aaPredicted RBP22.9■■□□□ 1.26
SNAPC3-207ENST00000610884 EP400Q96L91 3159 aa22.9■■□□□ 1.26
SNAPC3-207ENST00000610884 ANKRD45Q5TZF3 282 aa22.89■■□□□ 1.25
SNAPC3-207ENST00000610884 SCN11AQ9UI33 1791 aa22.89■■□□□ 1.25
SNAPC3-207ENST00000610884 COL16A1Q07092 1604 aaPredicted RBP22.89■■□□□ 1.25
SNAPC3-207ENST00000610884 PDIA6Q15084 440 aa22.88■■□□□ 1.25
SNAPC3-207ENST00000610884 AAMPQ13685 434 aa22.88■■□□□ 1.25
SNAPC3-207ENST00000610884 BACH2Q9BYV9 841 aa22.88■■□□□ 1.25
SNAPC3-207ENST00000610884 DBF4Q9UBU7 674 aaPredicted RBP22.88■■□□□ 1.25
SNAPC3-207ENST00000610884 ASAP1Q9ULH1 1129 aa22.88■■□□□ 1.25
SNAPC3-207ENST00000610884 CWF19L2Q2TBE0 894 aaKnown RBP22.87■■□□□ 1.25
SNAPC3-207ENST00000610884 MAP3K2Q9Y2U5 619 aa22.86■■□□□ 1.25
SNAPC3-207ENST00000610884 HEG1Q9ULI3 1381 aa22.86■■□□□ 1.25
SNAPC3-207ENST00000610884 NBPF7P0C2Y1 421 aaPredicted RBP22.86■■□□□ 1.25
SNAPC3-207ENST00000610884 RTL5Q5HYW3 569 aaPredicted RBP22.86■■□□□ 1.25
SNAPC3-207ENST00000610884 JARID2Q92833 1246 aaPredicted RBP22.86■■□□□ 1.25
SNAPC3-207ENST00000610884 HSP90AB1P08238 724 aaKnown RBP22.85■■□□□ 1.25
SNAPC3-207ENST00000610884 CEP85Q6P2H3 762 aa22.85■■□□□ 1.25
SNAPC3-207ENST00000610884 NGLY1Q96IV0 654 aa22.85■■□□□ 1.25
SNAPC3-207ENST00000610884 USP44Q9H0E7 712 aa22.85■■□□□ 1.25
SNAPC3-207ENST00000610884 SIPA1L3O60292 1781 aaPredicted RBP22.85■■□□□ 1.25
SNAPC3-207ENST00000610884 ABCC6O95255 1503 aa22.85■■□□□ 1.25
SNAPC3-207ENST00000610884 PKD1L3Q7Z443 1732 aa22.84■■□□□ 1.25
SNAPC3-207ENST00000610884 SMARCA5O60264 1052 aaPredicted RBP22.84■■□□□ 1.25
SNAPC3-207ENST00000610884 CCT4P50991 539 aaKnown RBP22.84■■□□□ 1.25
SNAPC3-207ENST00000610884 SMC5Q8IY18 1101 aa22.84■■□□□ 1.25
SNAPC3-207ENST00000610884 C16orf71Q8IYS4 520 aaPredicted RBP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms