RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 PEAK1Q9H792 1746 aa17.92■□□□□ 0.46
CTCFL-219ENST00000608720 GNAI3P08754 354 aa17.91■□□□□ 0.46
CTCFL-219ENST00000608720 MCM2P49736 904 aa17.91■□□□□ 0.46
CTCFL-219ENST00000608720 KDRP35968 1356 aa17.91■□□□□ 0.46
CTCFL-219ENST00000608720 SOX12O15370 315 aa17.91■□□□□ 0.46
CTCFL-219ENST00000608720 PKP1Q13835 747 aa17.9■□□□□ 0.46
CTCFL-219ENST00000608720 ZGPATQ8N5A5 531 aaKnown RBP17.9■□□□□ 0.46
CTCFL-219ENST00000608720 LRRCC1Q9C099 1032 aa17.9■□□□□ 0.46
CTCFL-219ENST00000608720 TOPAZ1Q8N9V7 1692 aa17.9■□□□□ 0.46
CTCFL-219ENST00000608720 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.9■□□□□ 0.46
CTCFL-219ENST00000608720 NCLP19338 710 aaKnown RBP17.9■□□□□ 0.46
CTCFL-219ENST00000608720 CCDC30Q5VVM6 783 aa17.9■□□□□ 0.46
CTCFL-219ENST00000608720 NALCNQ8IZF0 1738 aa17.89■□□□□ 0.46
CTCFL-219ENST00000608720 IGSF1Q8N6C5 1336 aa17.89■□□□□ 0.45
CTCFL-219ENST00000608720 MCCP23508 829 aa17.89■□□□□ 0.45
CTCFL-219ENST00000608720 ZSCAN23Q3MJ62 389 aa17.89■□□□□ 0.45
CTCFL-219ENST00000608720 CAVIN1Q6NZI2 390 aaKnown RBP17.89■□□□□ 0.45
CTCFL-219ENST00000608720 EYA1Q99502 592 aa17.89■□□□□ 0.45
CTCFL-219ENST00000608720 SOS1Q07889 1333 aaPredicted RBP17.89■□□□□ 0.45
CTCFL-219ENST00000608720 SALL3Q9BXA9 1300 aa17.89■□□□□ 0.45
CTCFL-219ENST00000608720 OFD1O75665 1012 aa17.88■□□□□ 0.45
CTCFL-219ENST00000608720 AMPHP49418 695 aa17.88■□□□□ 0.45
CTCFL-219ENST00000608720 ATP8B2P98198 1209 aa17.88■□□□□ 0.45
CTCFL-219ENST00000608720 ESYT1Q9BSJ8 1104 aa17.88■□□□□ 0.45
CTCFL-219ENST00000608720 EXOC6BQ9Y2D4 811 aa17.88■□□□□ 0.45
CTCFL-219ENST00000608720 ZDHHC9Q9Y397 364 aa17.88■□□□□ 0.45
CTCFL-219ENST00000608720 FLIIQ13045 1269 aa17.88■□□□□ 0.45
CTCFL-219ENST00000608720 LTKP29376 864 aa17.87■□□□□ 0.45
CTCFL-219ENST00000608720 SRCIN1Q9C0H9 1055 aa17.87■□□□□ 0.45
CTCFL-219ENST00000608720 PRPF40AO75400 957 aaKnown RBP17.87■□□□□ 0.45
CTCFL-219ENST00000608720 MX1P20591 662 aa17.87■□□□□ 0.45
CTCFL-219ENST00000608720 NEK4P51957 841 aa17.87■□□□□ 0.45
CTCFL-219ENST00000608720 ANAPC15P60006 121 aa17.87■□□□□ 0.45
CTCFL-219ENST00000608720 KIAA1211Q6ZU35 1233 aa17.87■□□□□ 0.45
CTCFL-219ENST00000608720 PRDM4Q9UKN5 801 aa17.87■□□□□ 0.45
CTCFL-219ENST00000608720 FKBP5Q13451 457 aaPredicted RBP17.86■□□□□ 0.45
CTCFL-219ENST00000608720 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.86■□□□□ 0.45
CTCFL-219ENST00000608720 ZSCAN30Q86W11 494 aa17.86■□□□□ 0.45
CTCFL-219ENST00000608720 PODXL2Q9NZ53 605 aa17.86■□□□□ 0.45
CTCFL-219ENST00000608720 TMX3Q96JJ7 454 aa17.86■□□□□ 0.45
CTCFL-219ENST00000608720 BABAM1Q9NWV8 329 aa17.86■□□□□ 0.45
CTCFL-219ENST00000608720 STAP2Q9UGK3 403 aa17.86■□□□□ 0.45
CTCFL-219ENST00000608720 RIMS1Q86UR5 1692 aaKnown RBP17.85■□□□□ 0.45
CTCFL-219ENST00000608720 UBR1Q8IWV7 1749 aa17.85■□□□□ 0.45
CTCFL-219ENST00000608720 GNAT3A8MTJ3 354 aa17.85■□□□□ 0.45
CTCFL-219ENST00000608720 NGDNQ8NEJ9 315 aaKnown RBP17.85■□□□□ 0.45
CTCFL-219ENST00000608720 PTPRUQ92729 1446 aa17.85■□□□□ 0.45
CTCFL-219ENST00000608720 CHMLP26374 656 aa17.84■□□□□ 0.45
CTCFL-219ENST00000608720 CUL4AQ13619 759 aa17.84■□□□□ 0.45
CTCFL-219ENST00000608720 HS1BP3Q53T59 392 aa17.84■□□□□ 0.45
CTCFL-219ENST00000608720 AMOTL2Q9Y2J4 779 aa17.84■□□□□ 0.45
CTCFL-219ENST00000608720 EID1Q9Y6B2 187 aa17.84■□□□□ 0.45
CTCFL-219ENST00000608720 PNMA6EA0A0J9YXQ4 647 aa17.83■□□□□ 0.45
CTCFL-219ENST00000608720 GPT2Q8TD30 523 aa17.83■□□□□ 0.45
CTCFL-219ENST00000608720 IL17RAQ96F46 866 aa17.83■□□□□ 0.45
CTCFL-219ENST00000608720 INTS4Q96HW7 963 aaKnown RBP17.83■□□□□ 0.45
CTCFL-219ENST00000608720 EPB41L2O43491 1005 aaKnown RBP17.83■□□□□ 0.44
CTCFL-219ENST00000608720 AOX1Q06278 1338 aa17.83■□□□□ 0.44
CTCFL-219ENST00000608720 MTERF4Q7Z6M4 381 aaKnown RBP17.83■□□□□ 0.44
CTCFL-219ENST00000608720 SLC26A8Q96RN1 970 aa17.83■□□□□ 0.44
CTCFL-219ENST00000608720 ADAMTSL3P82987 1691 aa17.82■□□□□ 0.44
CTCFL-219ENST00000608720 TRIM6-TRIM34B2RNG4 842 aa17.82■□□□□ 0.44
CTCFL-219ENST00000608720 TSHZ3Q63HK5 1081 aa17.82■□□□□ 0.44
CTCFL-219ENST00000608720 RILPL2Q969X0 211 aa17.82■□□□□ 0.44
CTCFL-219ENST00000608720 FER1L4A9Z1Z3 1794 aa17.82■□□□□ 0.44
CTCFL-219ENST00000608720 AEBP2Q6ZN18 517 aaPredicted RBP17.82■□□□□ 0.44
CTCFL-219ENST00000608720 CEP170BQ9Y4F5 1589 aaPredicted RBP17.81■□□□□ 0.44
CTCFL-219ENST00000608720 BRD1O95696 1058 aa17.81■□□□□ 0.44
CTCFL-219ENST00000608720 MBD3O95983 291 aa17.81■□□□□ 0.44
CTCFL-219ENST00000608720 TAF7Q15545 349 aaPredicted RBP17.81■□□□□ 0.44
CTCFL-219ENST00000608720 RBSNQ9H1K0 784 aa17.81■□□□□ 0.44
CTCFL-219ENST00000608720 ANO2Q9NQ90 1003 aa17.81■□□□□ 0.44
CTCFL-219ENST00000608720 TBX22Q9Y458 520 aa17.81■□□□□ 0.44
CTCFL-219ENST00000608720 LRRFIP2Q9Y608 721 aaKnown RBP17.81■□□□□ 0.44
CTCFL-219ENST00000608720 PRIM1P49642 420 aaKnown RBP17.8■□□□□ 0.44
CTCFL-219ENST00000608720 UBTFL1P0CB47 393 aaPredicted RBP17.79■□□□□ 0.44
CTCFL-219ENST00000608720 NLRP6P59044 892 aa17.79■□□□□ 0.44
CTCFL-219ENST00000608720 LRSAM1Q6UWE0 723 aa17.79■□□□□ 0.44
CTCFL-219ENST00000608720 USP44Q9H0E7 712 aa17.79■□□□□ 0.44
CTCFL-219ENST00000608720 PXDNLA1KZ92 1463 aa17.79■□□□□ 0.44
CTCFL-219ENST00000608720 RAB11FIP3O75154 756 aa17.79■□□□□ 0.44
CTCFL-219ENST00000608720 MSNP26038 577 aaKnown RBP17.79■□□□□ 0.44
CTCFL-219ENST00000608720 IL17REQ8NFR9 667 aa17.79■□□□□ 0.44
CTCFL-219ENST00000608720 NECTIN2Q92692 538 aa17.79■□□□□ 0.44
CTCFL-219ENST00000608720 RBM27Q9P2N5 1060 aaKnown RBP17.79■□□□□ 0.44
CTCFL-219ENST00000608720 PALD1Q9ULE6 856 aa17.79■□□□□ 0.44
CTCFL-219ENST00000608720 MAP3K5Q99683 1374 aa17.78■□□□□ 0.44
CTCFL-219ENST00000608720 HOXC9P31274 260 aa17.78■□□□□ 0.44
CTCFL-219ENST00000608720 PDLIM2Q96JY6 352 aa17.78■□□□□ 0.44
CTCFL-219ENST00000608720 SSH3Q8TE77 659 aa17.78■□□□□ 0.44
CTCFL-219ENST00000608720 SMAP1Q8IYB5 467 aaPredicted RBP17.77■□□□□ 0.44
CTCFL-219ENST00000608720 TMEM63CQ9P1W3 806 aa17.77■□□□□ 0.44
CTCFL-219ENST00000608720 FMN2Q9NZ56 1722 aa17.77■□□□□ 0.43
CTCFL-219ENST00000608720 AK9Q5TCS8 1911 aa17.77■□□□□ 0.43
CTCFL-219ENST00000608720 LRRC37A3O60309 1634 aa17.76■□□□□ 0.43
CTCFL-219ENST00000608720 HSPA2P54652 639 aa17.75■□□□□ 0.43
CTCFL-219ENST00000608720 HDGFL1Q5TGJ6 251 aa17.75■□□□□ 0.43
CTCFL-219ENST00000608720 FOXD4L5Q5VV16 416 aaPredicted RBP17.75■□□□□ 0.43
CTCFL-219ENST00000608720 FOXD4L4Q8WXT5 416 aaPredicted RBP17.75■□□□□ 0.43
CTCFL-219ENST00000608720 ZNF500O60304 480 aaPredicted RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms