RNA–Protein interactions for RNA: ENST00000607959.5

USF2-216, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 5

Gene USF2, Length 1,920 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-216ENST00000607959 BRPF1P55201 1214 aaPredicted RBP28.16■■■□□ 2.1
USF2-216ENST00000607959 MRPL50Q8N5N7 158 aaKnown RBP28.16■■■□□ 2.1
USF2-216ENST00000607959 TCERG1O14776 1098 aaKnown RBP28.15■■■□□ 2.1
USF2-216ENST00000607959 NKX1-1Q15270 411 aaPredicted RBP28.15■■■□□ 2.1
USF2-216ENST00000607959 FNBP4Q8N3X1 1017 aaPredicted RBP28.15■■■□□ 2.1
USF2-216ENST00000607959 SLC52A2Q9HAB3 445 aa28.15■■■□□ 2.1
USF2-216ENST00000607959 BTBD11A6QL63 1104 aa28.14■■■□□ 2.1
USF2-216ENST00000607959 UNC5CLQ8IV45 518 aa28.14■■■□□ 2.1
USF2-216ENST00000607959 NGLY1Q96IV0 654 aa28.14■■■□□ 2.1
USF2-216ENST00000607959 EIF4A1P60842 406 aaKnown RBP28.13■■■□□ 2.09
USF2-216ENST00000607959 DDX54Q8TDD1 881 aaKnown RBP28.13■■■□□ 2.09
USF2-216ENST00000607959 HSP90AB1P08238 724 aaKnown RBP28.12■■■□□ 2.09
USF2-216ENST00000607959 RLBP1P12271 317 aa28.12■■■□□ 2.09
USF2-216ENST00000607959 PDE3AQ14432 1141 aa28.12■■■□□ 2.09
USF2-216ENST00000607959 NFATC2IPQ8NCF5 419 aa28.12■■■□□ 2.09
USF2-216ENST00000607959 PANK1Q8TE04 598 aa28.12■■■□□ 2.09
USF2-216ENST00000607959 PPP4R2Q9NY27 417 aa28.12■■■□□ 2.09
USF2-216ENST00000607959 NOB1Q9ULX3 412 aaKnown RBP28.12■■■□□ 2.09
USF2-216ENST00000607959 TOGARAM1Q9Y4F4 1720 aa28.11■■■□□ 2.09
USF2-216ENST00000607959 THRAP3Q9Y2W1 955 aaKnown RBP28.1■■■□□ 2.09
USF2-216ENST00000607959 CANXP27824 592 aaKnown RBP28.09■■■□□ 2.09
USF2-216ENST00000607959 HEG1Q9ULI3 1381 aa28.09■■■□□ 2.09
USF2-216ENST00000607959 ZKSCAN2Q63HK3 967 aa28.08■■■□□ 2.09
USF2-216ENST00000607959 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.08■■■□□ 2.09
USF2-216ENST00000607959 TRIM27P14373 513 aa28.08■■■□□ 2.09
USF2-216ENST00000607959 VPS72Q15906 364 aa28.07■■■□□ 2.08
USF2-216ENST00000607959 TNS2Q63HR2 1409 aa28.07■■■□□ 2.08
USF2-216ENST00000607959 SLC39A6Q13433 755 aa28.06■■■□□ 2.08
USF2-216ENST00000607959 KIF16BQ96L93 1317 aa28.06■■■□□ 2.08
USF2-216ENST00000607959 ATF7IPQ6VMQ6 1270 aa28.06■■■□□ 2.08
USF2-216ENST00000607959 BARGINQ6ZT62 677 aa28.05■■■□□ 2.08
USF2-216ENST00000607959 CLUAP1Q96AJ1 413 aa28.05■■■□□ 2.08
USF2-216ENST00000607959 ERVV-2B6SEH9 535 aa28.04■■■□□ 2.08
USF2-216ENST00000607959 SOS1Q07889 1333 aaPredicted RBP28.04■■■□□ 2.08
USF2-216ENST00000607959 CDCA7Q9BWT1 371 aaPredicted RBP28.04■■■□□ 2.08
USF2-216ENST00000607959 CCDC9Q9Y3X0 531 aaKnown RBP28.04■■■□□ 2.08
USF2-216ENST00000607959 EXOC5O00471 708 aa28.03■■■□□ 2.08
USF2-216ENST00000607959 CABP4P57796 275 aa28.03■■■□□ 2.08
USF2-216ENST00000607959 ZNF790Q6PG37 636 aa28.03■■■□□ 2.08
USF2-216ENST00000607959 USP21Q9UK80 565 aa28.03■■■□□ 2.08
USF2-216ENST00000607959 COG6Q9Y2V7 657 aa28.03■■■□□ 2.08
USF2-216ENST00000607959 B4GALNT3Q6L9W6 998 aa28.02■■■□□ 2.08
USF2-216ENST00000607959 DZIP1LQ8IYY4 767 aaKnown RBP28.01■■■□□ 2.07
USF2-216ENST00000607959 GLI3P10071 1580 aa28.01■■■□□ 2.07
USF2-216ENST00000607959 ARHGAP45Q92619 1136 aa28■■■□□ 2.07
USF2-216ENST00000607959 PRAMEF22A3QJZ6 481 aa28■■■□□ 2.07
USF2-216ENST00000607959 GIGYF1O75420 1035 aaPredicted RBP28■■■□□ 2.07
USF2-216ENST00000607959 HOXB7P09629 217 aa28■■■□□ 2.07
USF2-216ENST00000607959 IPO8O15397 1037 aaKnown RBP27.99■■■□□ 2.07
USF2-216ENST00000607959 MEX3CQ5U5Q3 659 aaKnown RBP27.99■■■□□ 2.07
USF2-216ENST00000607959 NECTIN2Q92692 538 aa27.99■■■□□ 2.07
USF2-216ENST00000607959 PAPPAQ13219 1627 aa27.99■■■□□ 2.07
USF2-216ENST00000607959 RGS12O14924 1447 aa27.99■■■□□ 2.07
USF2-216ENST00000607959 AFF2P51816 1311 aa27.99■■■□□ 2.07
USF2-216ENST00000607959 SLC4A2P04920 1241 aa27.98■■■□□ 2.07
USF2-216ENST00000607959 G2E3Q7L622 706 aa27.98■■■□□ 2.07
USF2-216ENST00000607959 C5P01031 1676 aa27.98■■■□□ 2.07
USF2-216ENST00000607959 ITGB4P16144 1822 aa27.98■■■□□ 2.07
USF2-216ENST00000607959 DDB1Q16531 1140 aa27.97■■■□□ 2.07
USF2-216ENST00000607959 FAM98CQ17RN3 349 aaKnown RBP27.97■■■□□ 2.07
USF2-216ENST00000607959 ZNF496Q96IT1 587 aaPredicted RBP27.97■■■□□ 2.07
USF2-216ENST00000607959 CCDC30Q5VVM6 783 aa27.96■■■□□ 2.07
USF2-216ENST00000607959 UBR2Q8IWV8 1755 aa27.96■■■□□ 2.07
USF2-216ENST00000607959 HDGFL1Q5TGJ6 251 aa27.96■■■□□ 2.07
USF2-216ENST00000607959 CACNA1FO60840 1977 aa27.96■■■□□ 2.07
USF2-216ENST00000607959 MARCH10Q8NA82 808 aaPredicted RBP27.95■■■□□ 2.06
USF2-216ENST00000607959 FTSJ3Q8IY81 847 aaKnown RBP27.94■■■□□ 2.06
USF2-216ENST00000607959 TMEM57Q8N5G2 664 aa27.94■■■□□ 2.06
USF2-216ENST00000607959 MVPQ14764 893 aaKnown RBP27.94■■■□□ 2.06
USF2-216ENST00000607959 ABCC4O15439 1325 aa27.93■■■□□ 2.06
USF2-216ENST00000607959 KCPQ6ZWJ8 1503 aa27.93■■■□□ 2.06
USF2-216ENST00000607959 MS4A1P11836 297 aa27.93■■■□□ 2.06
USF2-216ENST00000607959 EIF2S2P20042 333 aaKnown RBP27.93■■■□□ 2.06
USF2-216ENST00000607959 THSD7AQ9UPZ6 1657 aa27.93■■■□□ 2.06
USF2-216ENST00000607959 ATRNO75882 1429 aa27.92■■■□□ 2.06
USF2-216ENST00000607959 DOT1LQ8TEK3 1739 aa27.91■■■□□ 2.06
USF2-216ENST00000607959 PIGBQ92521 554 aa27.91■■■□□ 2.06
USF2-216ENST00000607959 STK31Q9BXU1 1019 aa27.91■■■□□ 2.06
USF2-216ENST00000607959 CCDC136Q96JN2 1154 aa27.9■■■□□ 2.06
USF2-216ENST00000607959 TTC5Q8N0Z6 440 aa27.9■■■□□ 2.06
USF2-216ENST00000607959 API5Q9BZZ5 524 aaKnown RBP27.9■■■□□ 2.06
USF2-216ENST00000607959 TMOD3Q9NYL9 352 aa27.89■■■□□ 2.06
USF2-216ENST00000607959 CHPF2Q9P2E5 772 aa27.89■■■□□ 2.06
USF2-216ENST00000607959 PTPRCP08575 1304 aa27.89■■■□□ 2.06
USF2-216ENST00000607959 BCL9O00512 1426 aa27.89■■■□□ 2.06
USF2-216ENST00000607959 GJD4Q96KN9 370 aaPredicted RBP27.88■■■□□ 2.05
USF2-216ENST00000607959 FMNL2Q96PY5 1086 aa27.88■■■□□ 2.05
USF2-216ENST00000607959 FLIIQ13045 1269 aa27.87■■■□□ 2.05
USF2-216ENST00000607959 PHAXQ9H814 394 aaKnown RBP27.87■■■□□ 2.05
USF2-216ENST00000607959 KAT6BQ8WYB5 2073 aa27.87■■■□□ 2.05
USF2-216ENST00000607959 ANXA1P04083 346 aa27.86■■■□□ 2.05
USF2-216ENST00000607959 PROSER3Q2NL68 480 aa27.86■■■□□ 2.05
USF2-216ENST00000607959 ITPRIPQ8IWB1 547 aa27.86■■■□□ 2.05
USF2-216ENST00000607959 PDIA6Q15084 440 aa27.85■■■□□ 2.05
USF2-216ENST00000607959 ASAP1Q9ULH1 1129 aa27.85■■■□□ 2.05
USF2-216ENST00000607959 USP16Q9Y5T5 823 aa27.85■■■□□ 2.05
USF2-216ENST00000607959 SNRPA1P09661 255 aaKnown RBP27.84■■■□□ 2.05
USF2-216ENST00000607959 ATG3Q9NT62 314 aa27.84■■■□□ 2.05
USF2-216ENST00000607959 LAMB4A4D0S4 1761 aa27.84■■■□□ 2.05
USF2-216ENST00000607959 PRIM1P49642 420 aaKnown RBP27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms