RNA–Protein interactions for RNA: ENST00000607836.1

AC009961.1-203, humanhuman

TSL 1 (best) BASIC

Gene AC009961.1, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009961.1-203ENST00000607836 RGPD5Q99666 1765 aa19.08■□□□□ 0.65
AC009961.1-203ENST00000607836 EIF4A1P60842 406 aaKnown RBP19.08■□□□□ 0.65
AC009961.1-203ENST00000607836 CHPF2Q9P2E5 772 aa19.08■□□□□ 0.65
AC009961.1-203ENST00000607836 LRRC37A3O60309 1634 aa19.08■□□□□ 0.65
AC009961.1-203ENST00000607836 CEMIPQ8WUJ3 1361 aa19.08■□□□□ 0.64
AC009961.1-203ENST00000607836 GSPT1P15170 499 aaKnown RBP19.08■□□□□ 0.64
AC009961.1-203ENST00000607836 AKAP4Q5JQC9 854 aa19.08■□□□□ 0.64
AC009961.1-203ENST00000607836 PLEKHM2Q8IWE5 1019 aa19.08■□□□□ 0.64
AC009961.1-203ENST00000607836 EXOC6BQ9Y2D4 811 aa19.08■□□□□ 0.64
AC009961.1-203ENST00000607836 BMP2KLQ5H9B9 411 aa19.07■□□□□ 0.64
AC009961.1-203ENST00000607836 RPAP2Q8IXW5 612 aaPredicted RBP19.07■□□□□ 0.64
AC009961.1-203ENST00000607836 TBC1D2Q9BYX2 928 aa19.07■□□□□ 0.64
AC009961.1-203ENST00000607836 CCT4P50991 539 aaKnown RBP19.07■□□□□ 0.64
AC009961.1-203ENST00000607836 MST1RQ04912 1400 aa19.07■□□□□ 0.64
AC009961.1-203ENST00000607836 DEKP35659 375 aaKnown RBP19.06■□□□□ 0.64
AC009961.1-203ENST00000607836 NFKBIBQ15653 356 aa19.06■□□□□ 0.64
AC009961.1-203ENST00000607836 RNMTO43148 476 aaKnown RBP19.06■□□□□ 0.64
AC009961.1-203ENST00000607836 CSB-PGBD3P0DP91 1061 aa19.06■□□□□ 0.64
AC009961.1-203ENST00000607836 TSHZ3Q63HK5 1081 aa19.06■□□□□ 0.64
AC009961.1-203ENST00000607836 TBC1D9Q6ZT07 1266 aa19.06■□□□□ 0.64
AC009961.1-203ENST00000607836 ERBB3P21860 1342 aa19.05■□□□□ 0.64
AC009961.1-203ENST00000607836 PNMA6EA0A0J9YXQ4 647 aa19.05■□□□□ 0.64
AC009961.1-203ENST00000607836 TRPM3Q9HCF6 1732 aaPredicted RBP19.05■□□□□ 0.64
AC009961.1-203ENST00000607836 BECN1Q14457 450 aa19.04■□□□□ 0.64
AC009961.1-203ENST00000607836 LRRFIP2Q9Y608 721 aaKnown RBP19.04■□□□□ 0.64
AC009961.1-203ENST00000607836 SLC39A6Q13433 755 aa19.04■□□□□ 0.64
AC009961.1-203ENST00000607836 SLIT3O75094 1523 aa19.04■□□□□ 0.64
AC009961.1-203ENST00000607836 GNAI2P04899 355 aa19.03■□□□□ 0.64
AC009961.1-203ENST00000607836 FRAT2O75474 233 aaPredicted RBP19.03■□□□□ 0.64
AC009961.1-203ENST00000607836 MED1Q15648 1581 aaPredicted RBP19.02■□□□□ 0.64
AC009961.1-203ENST00000607836 FAM208AQ9UK61 1670 aaKnown RBP19.02■□□□□ 0.64
AC009961.1-203ENST00000607836 PROSER3Q2NL68 480 aa19.02■□□□□ 0.64
AC009961.1-203ENST00000607836 AMOTQ4VCS5 1084 aa19.02■□□□□ 0.64
AC009961.1-203ENST00000607836 PI4KAP2A4QPH2 592 aa19.02■□□□□ 0.63
AC009961.1-203ENST00000607836 PI4KAP1Q8N8J0 262 aa19.02■□□□□ 0.63
AC009961.1-203ENST00000607836 USP44Q9H0E7 712 aa19.02■□□□□ 0.63
AC009961.1-203ENST00000607836 CADPS2Q86UW7 1296 aa19.01■□□□□ 0.63
AC009961.1-203ENST00000607836 RAPGEF4Q8WZA2 1011 aa19.01■□□□□ 0.63
AC009961.1-203ENST00000607836 TTC22Q5TAA0 569 aa18.99■□□□□ 0.63
AC009961.1-203ENST00000607836 BABAM1Q9NWV8 329 aa18.99■□□□□ 0.63
AC009961.1-203ENST00000607836 HMMRO75330 724 aa18.99■□□□□ 0.63
AC009961.1-203ENST00000607836 NPHP3Q7Z494 1330 aa18.98■□□□□ 0.63
AC009961.1-203ENST00000607836 ZNF335Q9H4Z2 1342 aaPredicted RBP18.98■□□□□ 0.63
AC009961.1-203ENST00000607836 NBPF7P0C2Y1 421 aaPredicted RBP18.98■□□□□ 0.63
AC009961.1-203ENST00000607836 RBM42Q9BTD8 480 aaKnown RBP18.98■□□□□ 0.63
AC009961.1-203ENST00000607836 UBTFL1P0CB47 393 aaPredicted RBP18.98■□□□□ 0.63
AC009961.1-203ENST00000607836 PIP4K2AP48426 406 aaPredicted RBP18.97■□□□□ 0.63
AC009961.1-203ENST00000607836 AIMP1Q12904 312 aaKnown RBP18.97■□□□□ 0.63
AC009961.1-203ENST00000607836 NFATC2IPQ8NCF5 419 aa18.97■□□□□ 0.63
AC009961.1-203ENST00000607836 GNAI3P08754 354 aa18.97■□□□□ 0.63
AC009961.1-203ENST00000607836 BRINP3Q76B58 766 aa18.97■□□□□ 0.63
AC009961.1-203ENST00000607836 PHRF1Q9P1Y6 1649 aaKnown RBP18.96■□□□□ 0.63
AC009961.1-203ENST00000607836 GIGYF1O75420 1035 aaPredicted RBP18.96■□□□□ 0.63
AC009961.1-203ENST00000607836 SDSP20132 328 aa18.96■□□□□ 0.63
AC009961.1-203ENST00000607836 SRCIN1Q9C0H9 1055 aa18.96■□□□□ 0.63
AC009961.1-203ENST00000607836 KIF1AQ12756 1690 aa18.96■□□□□ 0.63
AC009961.1-203ENST00000607836 ALS2Q96Q42 1657 aa18.96■□□□□ 0.63
AC009961.1-203ENST00000607836 CDC45O75419 566 aa18.96■□□□□ 0.63
AC009961.1-203ENST00000607836 IL1RAPL2Q9NP60 686 aa18.96■□□□□ 0.63
AC009961.1-203ENST00000607836 KDM4FA0A1W2PPD8 638 aa18.95■□□□□ 0.62
AC009961.1-203ENST00000607836 DNAAF4Q8WXU2 420 aa18.95■□□□□ 0.62
AC009961.1-203ENST00000607836 TATP17735 454 aaPredicted RBP18.94■□□□□ 0.62
AC009961.1-203ENST00000607836 ATP8B2P98198 1209 aa18.94■□□□□ 0.62
AC009961.1-203ENST00000607836 LMO7Q8WWI1 1683 aa18.94■□□□□ 0.62
AC009961.1-203ENST00000607836 CD2BP2O95400 341 aaKnown RBP18.94■□□□□ 0.62
AC009961.1-203ENST00000607836 SPATA31A3Q5VYP0 1347 aa18.94■□□□□ 0.62
AC009961.1-203ENST00000607836 MEGF6O75095 1541 aa18.93■□□□□ 0.62
AC009961.1-203ENST00000607836 CWF19L2Q2TBE0 894 aaKnown RBP18.93■□□□□ 0.62
AC009961.1-203ENST00000607836 PPP1R42Q7Z4L9 355 aa18.93■□□□□ 0.62
AC009961.1-203ENST00000607836 KIF2CQ99661 725 aa18.93■□□□□ 0.62
AC009961.1-203ENST00000607836 FOXD4L1Q9NU39 408 aa18.93■□□□□ 0.62
AC009961.1-203ENST00000607836 MAP3K2Q9Y2U5 619 aa18.93■□□□□ 0.62
AC009961.1-203ENST00000607836 MYL6BP14649 208 aa18.93■□□□□ 0.62
AC009961.1-203ENST00000607836 RBM25P49756 843 aaKnown RBP18.93■□□□□ 0.62
AC009961.1-203ENST00000607836 BEND3Q5T5X7 828 aa18.93■□□□□ 0.62
AC009961.1-203ENST00000607836 KDM3BQ7LBC6 1761 aa18.92■□□□□ 0.62
AC009961.1-203ENST00000607836 NCAPD2Q15021 1401 aa18.92■□□□□ 0.62
AC009961.1-203ENST00000607836 TNS3Q68CZ2 1445 aa18.92■□□□□ 0.62
AC009961.1-203ENST00000607836 ADCY9O60503 1353 aa18.92■□□□□ 0.62
AC009961.1-203ENST00000607836 ANTXR1Q9H6X2 564 aa18.92■□□□□ 0.62
AC009961.1-203ENST00000607836 CACNA1FO60840 1977 aa18.92■□□□□ 0.62
AC009961.1-203ENST00000607836 PHKG2P15735 406 aa18.92■□□□□ 0.62
AC009961.1-203ENST00000607836 PDE1AP54750 535 aa18.92■□□□□ 0.62
AC009961.1-203ENST00000607836 LRRCC1Q9C099 1032 aa18.92■□□□□ 0.62
AC009961.1-203ENST00000607836 DBF4Q9UBU7 674 aaPredicted RBP18.92■□□□□ 0.62
AC009961.1-203ENST00000607836 CYP27B1O15528 508 aa18.91■□□□□ 0.62
AC009961.1-203ENST00000607836 SOS1Q07889 1333 aaPredicted RBP18.91■□□□□ 0.62
AC009961.1-203ENST00000607836 SRGAP3O43295 1099 aa18.9■□□□□ 0.62
AC009961.1-203ENST00000607836 SURF6O75683 361 aaKnown RBP18.9■□□□□ 0.62
AC009961.1-203ENST00000607836 ZNF790Q6PG37 636 aa18.9■□□□□ 0.62
AC009961.1-203ENST00000607836 NUTM1Q86Y26 1132 aa18.9■□□□□ 0.62
AC009961.1-203ENST00000607836 HSCBQ8IWL3 235 aa18.9■□□□□ 0.62
AC009961.1-203ENST00000607836 USP35Q9P2H5 1018 aa18.9■□□□□ 0.62
AC009961.1-203ENST00000607836 KDM6AO15550 1401 aaPredicted RBP18.9■□□□□ 0.62
AC009961.1-203ENST00000607836 SLC52A2Q9HAB3 445 aa18.9■□□□□ 0.62
AC009961.1-203ENST00000607836 PRDM11Q9NQV5 511 aa18.9■□□□□ 0.62
AC009961.1-203ENST00000607836 HOXB7P09629 217 aa18.89■□□□□ 0.61
AC009961.1-203ENST00000607836 SLAIN2Q9P270 581 aa18.89■□□□□ 0.61
AC009961.1-203ENST00000607836 ZNF496Q96IT1 587 aaPredicted RBP18.89■□□□□ 0.61
AC009961.1-203ENST00000607836 SPG7Q9UQ90 795 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms