RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 MPHOSPH9Q99550 1183 aa17.87■□□□□ 0.45
HLA-F-230ENST00000606273 DDB1Q16531 1140 aa17.86■□□□□ 0.45
HLA-F-230ENST00000606273 TXNRD1Q16881 649 aa17.86■□□□□ 0.45
HLA-F-230ENST00000606273 NUDT16Q96DE0 195 aaKnown RBP17.86■□□□□ 0.45
HLA-F-230ENST00000606273 ARXQ96QS3 562 aa17.86■□□□□ 0.45
HLA-F-230ENST00000606273 CPDO75976 1380 aa17.86■□□□□ 0.45
HLA-F-230ENST00000606273 TULP4Q9NRJ4 1543 aa17.86■□□□□ 0.45
HLA-F-230ENST00000606273 GPR162Q16538 588 aa17.85■□□□□ 0.45
HLA-F-230ENST00000606273 ABTB2Q8N961 1025 aa17.84■□□□□ 0.45
HLA-F-230ENST00000606273 SPRYD3Q8NCJ5 442 aa17.84■□□□□ 0.45
HLA-F-230ENST00000606273 ZDHHC16Q969W1 377 aa17.83■□□□□ 0.44
HLA-F-230ENST00000606273 CEP350Q5VT06 3117 aa17.83■□□□□ 0.44
HLA-F-230ENST00000606273 PTPREP23469 700 aa17.82■□□□□ 0.44
HLA-F-230ENST00000606273 MARCH10Q8NA82 808 aaPredicted RBP17.82■□□□□ 0.44
HLA-F-230ENST00000606273 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.82■□□□□ 0.44
HLA-F-230ENST00000606273 VPS9D1Q9Y2B5 631 aa17.82■□□□□ 0.44
HLA-F-230ENST00000606273 ATP7BP35670 1465 aa17.82■□□□□ 0.44
HLA-F-230ENST00000606273 MAP3K5Q99683 1374 aa17.81■□□□□ 0.44
HLA-F-230ENST00000606273 GCP02774 474 aa17.81■□□□□ 0.44
HLA-F-230ENST00000606273 ADAM33Q9BZ11 813 aa17.81■□□□□ 0.44
HLA-F-230ENST00000606273 PEAK1Q9H792 1746 aa17.81■□□□□ 0.44
HLA-F-230ENST00000606273 CRB1P82279 1406 aa17.81■□□□□ 0.44
HLA-F-230ENST00000606273 RAB3GAP2Q9H2M9 1393 aa17.8■□□□□ 0.44
HLA-F-230ENST00000606273 ACEP12821 1306 aa17.8■□□□□ 0.44
HLA-F-230ENST00000606273 CAMK2BQ13554 666 aa17.8■□□□□ 0.44
HLA-F-230ENST00000606273 RGPD3A6NKT7 1758 aaPredicted RBP17.8■□□□□ 0.44
HLA-F-230ENST00000606273 RGPD4Q7Z3J3 1758 aa17.8■□□□□ 0.44
HLA-F-230ENST00000606273 PHRF1Q9P1Y6 1649 aaKnown RBP17.8■□□□□ 0.44
HLA-F-230ENST00000606273 PARP4Q9UKK3 1724 aaKnown RBP17.79■□□□□ 0.44
HLA-F-230ENST00000606273 STAC3Q96MF2 364 aa17.79■□□□□ 0.44
HLA-F-230ENST00000606273 COL5A2P05997 1499 aaPredicted RBP17.79■□□□□ 0.44
HLA-F-230ENST00000606273 POLR3AO14802 1390 aaPredicted RBP17.79■□□□□ 0.44
HLA-F-230ENST00000606273 USP19O94966 1318 aa17.78■□□□□ 0.44
HLA-F-230ENST00000606273 NLRP13Q86W25 1043 aa17.78■□□□□ 0.44
HLA-F-230ENST00000606273 BCL9O00512 1426 aa17.78■□□□□ 0.44
HLA-F-230ENST00000606273 ADGRB1O14514 1584 aa17.78■□□□□ 0.44
HLA-F-230ENST00000606273 CHD4Q14839 1912 aa17.78■□□□□ 0.44
HLA-F-230ENST00000606273 LMO7Q8WWI1 1683 aa17.77■□□□□ 0.44
HLA-F-230ENST00000606273 PLEKHG3A1L390 1219 aa17.77■□□□□ 0.44
HLA-F-230ENST00000606273 TRIM26Q12899 539 aaPredicted RBP17.77■□□□□ 0.44
HLA-F-230ENST00000606273 CDK19Q9BWU1 502 aa17.77■□□□□ 0.44
HLA-F-230ENST00000606273 TOM1L2Q6ZVM7 507 aa17.76■□□□□ 0.43
HLA-F-230ENST00000606273 SLC4A5Q9BY07 1137 aa17.76■□□□□ 0.43
HLA-F-230ENST00000606273 HCSTQ9UBK5 93 aa17.76■□□□□ 0.43
HLA-F-230ENST00000606273 PCDHGA10Q9Y5H3 936 aa17.76■□□□□ 0.43
HLA-F-230ENST00000606273 DPYSL4O14531 572 aa17.74■□□□□ 0.43
HLA-F-230ENST00000606273 CDCA7Q9BWT1 371 aaPredicted RBP17.74■□□□□ 0.43
HLA-F-230ENST00000606273 ZBED2Q9BTP6 218 aa17.73■□□□□ 0.43
HLA-F-230ENST00000606273 AATKQ6ZMQ8 1374 aa17.73■□□□□ 0.43
HLA-F-230ENST00000606273 ZBTB7CA1YPR0 619 aa17.72■□□□□ 0.43
HLA-F-230ENST00000606273 KCTD12Q96CX2 325 aaKnown RBP17.72■□□□□ 0.43
HLA-F-230ENST00000606273 SBF2Q86WG5 1849 aa17.72■□□□□ 0.43
HLA-F-230ENST00000606273 PAXIP1Q6ZW49 1069 aaPredicted RBP17.71■□□□□ 0.43
HLA-F-230ENST00000606273 CFAP44Q96MT7 982 aa17.71■□□□□ 0.43
HLA-F-230ENST00000606273 EXOC5O00471 708 aa17.7■□□□□ 0.42
HLA-F-230ENST00000606273 LRRC37A3O60309 1634 aa17.69■□□□□ 0.42
HLA-F-230ENST00000606273 KDM2AQ9Y2K7 1162 aa17.69■□□□□ 0.42
HLA-F-230ENST00000606273 WDR17Q8IZU2 1322 aa17.69■□□□□ 0.42
HLA-F-230ENST00000606273 HSPA6P17066 643 aa17.68■□□□□ 0.42
HLA-F-230ENST00000606273 GRIN3BO60391 1043 aa17.67■□□□□ 0.42
HLA-F-230ENST00000606273 PHF14O94880 888 aa17.67■□□□□ 0.42
HLA-F-230ENST00000606273 ZNF827Q17R98 1081 aa17.67■□□□□ 0.42
HLA-F-230ENST00000606273 TYW1BQ6NUM6 668 aa17.67■□□□□ 0.42
HLA-F-230ENST00000606273 NLGN2Q8NFZ4 835 aa17.67■□□□□ 0.42
HLA-F-230ENST00000606273 SLC16A10Q8TF71 515 aa17.67■□□□□ 0.42
HLA-F-230ENST00000606273 SHANK3Q9BYB0 1731 aa17.67■□□□□ 0.42
HLA-F-230ENST00000606273 BHMG1C9JSJ3 638 aaPredicted RBP17.66■□□□□ 0.42
HLA-F-230ENST00000606273 GOLGB1Q14789 3259 aaKnown RBP17.66■□□□□ 0.42
HLA-F-230ENST00000606273 YBX3P16989 372 aaKnown RBP eCLIP17.65■□□□□ 0.42
HLA-F-230ENST00000606273 POLD1P28340 1107 aa17.65■□□□□ 0.42
HLA-F-230ENST00000606273 DCAF11Q8TEB1 546 aa17.65■□□□□ 0.42
HLA-F-230ENST00000606273 FBXW7Q969H0 707 aa17.65■□□□□ 0.42
HLA-F-230ENST00000606273 CARD10Q9BWT7 1032 aa17.65■□□□□ 0.42
HLA-F-230ENST00000606273 LRRC4BQ9NT99 713 aa17.64■□□□□ 0.41
HLA-F-230ENST00000606273 ITSN1Q15811 1721 aa17.64■□□□□ 0.41
HLA-F-230ENST00000606273 ACSBG1Q96GR2 724 aa17.63■□□□□ 0.41
HLA-F-230ENST00000606273 GPBP1L1Q9HC44 474 aaPredicted RBP17.62■□□□□ 0.41
HLA-F-230ENST00000606273 PPP1R3GB7ZBB8 358 aa17.61■□□□□ 0.41
HLA-F-230ENST00000606273 ATP10DQ9P241 1426 aa17.61■□□□□ 0.41
HLA-F-230ENST00000606273 CSB-PGBD3P0DP91 1061 aa17.6■□□□□ 0.41
HLA-F-230ENST00000606273 COL9A1P20849 921 aa17.6■□□□□ 0.41
HLA-F-230ENST00000606273 ARHGEF25Q86VW2 580 aa17.6■□□□□ 0.41
HLA-F-230ENST00000606273 PCGF6Q9BYE7 350 aa17.6■□□□□ 0.41
HLA-F-230ENST00000606273 BRD4O60885 1362 aaPredicted RBP17.6■□□□□ 0.41
HLA-F-230ENST00000606273 PLA2G2EQ9NZK7 142 aa17.59■□□□□ 0.41
HLA-F-230ENST00000606273 PNPLA7Q6ZV29 1317 aa17.58■□□□□ 0.4
HLA-F-230ENST00000606273 MRPL50Q8N5N7 158 aaKnown RBP17.58■□□□□ 0.4
HLA-F-230ENST00000606273 EPAS1Q99814 870 aa17.58■□□□□ 0.4
HLA-F-230ENST00000606273 USP6P35125 1406 aa17.57■□□□□ 0.4
HLA-F-230ENST00000606273 PPIP5K1Q6PFW1 1433 aa17.57■□□□□ 0.4
HLA-F-230ENST00000606273 SRPK2P78362 688 aaKnown RBP17.57■□□□□ 0.4
HLA-F-230ENST00000606273 PAPPAQ13219 1627 aa17.57■□□□□ 0.4
HLA-F-230ENST00000606273 TOPAZ1Q8N9V7 1692 aa17.56■□□□□ 0.4
HLA-F-230ENST00000606273 PROX2Q3B8N5 592 aa17.56■□□□□ 0.4
HLA-F-230ENST00000606273 DDX12PQ92771 950 aa17.56■□□□□ 0.4
HLA-F-230ENST00000606273 CABP1Q9NZU7 370 aa17.56■□□□□ 0.4
HLA-F-230ENST00000606273 SLIT3O75094 1523 aa17.56■□□□□ 0.4
HLA-F-230ENST00000606273 GOLGA8CPA6NN73 597 aa17.55■□□□□ 0.4
HLA-F-230ENST00000606273 ZNF526Q8TF50 670 aaPredicted RBP17.55■□□□□ 0.4
HLA-F-230ENST00000606273 TFCP2L1Q9NZI6 479 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms