RNA–Protein interactions for RNA: ENST00000603633.2

LINC00221-201, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-201ENST00000603633 NCBP3Q53F19 620 aaKnown RBP20.6■□□□□ 0.89
LINC00221-201ENST00000603633 DCTN1Q14203 1278 aa20.58■□□□□ 0.89
LINC00221-201ENST00000603633 TAF7Q15545 349 aaPredicted RBP20.58■□□□□ 0.89
LINC00221-201ENST00000603633 NBPF14Q5TI25 921 aa20.58■□□□□ 0.89
LINC00221-201ENST00000603633 CCNL1Q9UK58 526 aaPredicted RBP20.58■□□□□ 0.89
LINC00221-201ENST00000603633 RRP7AQ9Y3A4 280 aaKnown RBP20.58■□□□□ 0.89
LINC00221-201ENST00000603633 MRC1P22897 1456 aa20.57■□□□□ 0.88
LINC00221-201ENST00000603633 LOC102724428A0A0B4J2F2 783 aa20.57■□□□□ 0.88
LINC00221-201ENST00000603633 BTBD11A6QL63 1104 aa20.57■□□□□ 0.88
LINC00221-201ENST00000603633 SIK1P57059 783 aa20.57■□□□□ 0.88
LINC00221-201ENST00000603633 TTC5Q8N0Z6 440 aa20.57■□□□□ 0.88
LINC00221-201ENST00000603633 NGEFQ8N5V2 710 aa20.57■□□□□ 0.88
LINC00221-201ENST00000603633 DOT1LQ8TEK3 1739 aa20.55■□□□□ 0.88
LINC00221-201ENST00000603633 TNS1Q9HBL0 1735 aaKnown RBP20.55■□□□□ 0.88
LINC00221-201ENST00000603633 CALD1Q05682 793 aaKnown RBP20.55■□□□□ 0.88
LINC00221-201ENST00000603633 ZNF790Q6PG37 636 aa20.54■□□□□ 0.88
LINC00221-201ENST00000603633 BABAM1Q9NWV8 329 aa20.54■□□□□ 0.88
LINC00221-201ENST00000603633 TRIM35Q9UPQ4 493 aa20.54■□□□□ 0.88
LINC00221-201ENST00000603633 CCDC27Q2M243 656 aa20.54■□□□□ 0.88
LINC00221-201ENST00000603633 RBM42Q9BTD8 480 aaKnown RBP20.54■□□□□ 0.88
LINC00221-201ENST00000603633 LRRC4BQ9NT99 713 aa20.54■□□□□ 0.88
LINC00221-201ENST00000603633 SBF2Q86WG5 1849 aa20.53■□□□□ 0.88
LINC00221-201ENST00000603633 ATP6V1AP38606 617 aa20.53■□□□□ 0.88
LINC00221-201ENST00000603633 SLC39A6Q13433 755 aa20.53■□□□□ 0.88
LINC00221-201ENST00000603633 TOGARAM1Q9Y4F4 1720 aa20.52■□□□□ 0.88
LINC00221-201ENST00000603633 PTCD1O75127 700 aaKnown RBP20.52■□□□□ 0.88
LINC00221-201ENST00000603633 VSIG10Q8N0Z9 540 aa20.51■□□□□ 0.87
LINC00221-201ENST00000603633 THUMPD2Q9BTF0 503 aaKnown RBP20.51■□□□□ 0.87
LINC00221-201ENST00000603633 STK32BQ9NY57 414 aa20.51■□□□□ 0.87
LINC00221-201ENST00000603633 ADAMTS7Q9UKP4 1686 aa20.51■□□□□ 0.87
LINC00221-201ENST00000603633 FMNL2Q96PY5 1086 aa20.5■□□□□ 0.87
LINC00221-201ENST00000603633 TEX13AQ9BXU3 409 aaPredicted RBP20.49■□□□□ 0.87
LINC00221-201ENST00000603633 BTAF1O14981 1849 aa20.48■□□□□ 0.87
LINC00221-201ENST00000603633 RGPD3A6NKT7 1758 aaPredicted RBP20.48■□□□□ 0.87
LINC00221-201ENST00000603633 RGPD4Q7Z3J3 1758 aa20.48■□□□□ 0.87
LINC00221-201ENST00000603633 KCNQ4P56696 695 aa20.48■□□□□ 0.87
LINC00221-201ENST00000603633 SLC15A2Q16348 729 aa20.48■□□□□ 0.87
LINC00221-201ENST00000603633 TSPYL4Q9UJ04 414 aa20.48■□□□□ 0.87
LINC00221-201ENST00000603633 ZNF496Q96IT1 587 aaPredicted RBP20.47■□□□□ 0.87
LINC00221-201ENST00000603633 SLC4A9Q96Q91 983 aa20.47■□□□□ 0.87
LINC00221-201ENST00000603633 ITPK1Q13572 414 aa20.46■□□□□ 0.87
LINC00221-201ENST00000603633 WWC1Q8IX03 1113 aa20.46■□□□□ 0.87
LINC00221-201ENST00000603633 CFAP44Q96MT7 982 aa20.46■□□□□ 0.87
LINC00221-201ENST00000603633 RC3H1Q5TC82 1133 aaKnown RBP20.45■□□□□ 0.86
LINC00221-201ENST00000603633 AKT1S1Q96B36 256 aa20.45■□□□□ 0.86
LINC00221-201ENST00000603633 IFT57Q9NWB7 429 aa20.45■□□□□ 0.86
LINC00221-201ENST00000603633 MIS18AQ9NYP9 233 aa20.45■□□□□ 0.86
LINC00221-201ENST00000603633 SCN11AQ9UI33 1791 aa20.45■□□□□ 0.86
LINC00221-201ENST00000603633 HEG1Q9ULI3 1381 aa20.45■□□□□ 0.86
LINC00221-201ENST00000603633 CHL1O00533 1208 aa20.45■□□□□ 0.86
LINC00221-201ENST00000603633 STARD3NLO95772 234 aa20.45■□□□□ 0.86
LINC00221-201ENST00000603633 GNAI1P63096 354 aa20.45■□□□□ 0.86
LINC00221-201ENST00000603633 AK7Q96M32 723 aa20.45■□□□□ 0.86
LINC00221-201ENST00000603633 ANO8Q9HCE9 1232 aaPredicted RBP20.45■□□□□ 0.86
LINC00221-201ENST00000603633 KCNQ3O43525 872 aa20.44■□□□□ 0.86
LINC00221-201ENST00000603633 SNRPA1P09661 255 aaKnown RBP20.44■□□□□ 0.86
LINC00221-201ENST00000603633 WDR63Q8IWG1 891 aa20.44■□□□□ 0.86
LINC00221-201ENST00000603633 LINC00116Q8NCU8 138 aa20.44■□□□□ 0.86
LINC00221-201ENST00000603633 TFCP2L1Q9NZI6 479 aa20.44■□□□□ 0.86
LINC00221-201ENST00000603633 R3HDM1Q15032 1099 aaKnown RBP20.43■□□□□ 0.86
LINC00221-201ENST00000603633 FLAD1Q8NFF5 587 aa20.43■□□□□ 0.86
LINC00221-201ENST00000603633 LAS1LQ9Y4W2 734 aaKnown RBP20.43■□□□□ 0.86
LINC00221-201ENST00000603633 KAT6BQ8WYB5 2073 aa20.43■□□□□ 0.86
LINC00221-201ENST00000603633 IL16Q14005 1332 aa20.43■□□□□ 0.86
LINC00221-201ENST00000603633 EIF4A1P60842 406 aaKnown RBP20.42■□□□□ 0.86
LINC00221-201ENST00000603633 DNAJC10Q8IXB1 793 aa20.42■□□□□ 0.86
LINC00221-201ENST00000603633 ITGB4P16144 1822 aa20.42■□□□□ 0.86
LINC00221-201ENST00000603633 ZNF827Q17R98 1081 aa20.42■□□□□ 0.86
LINC00221-201ENST00000603633 SALL2Q9Y467 1007 aaPredicted RBP20.42■□□□□ 0.86
LINC00221-201ENST00000603633 CNTNAP4Q9C0A0 1308 aa20.41■□□□□ 0.86
LINC00221-201ENST00000603633 ZNF853P0CG23 659 aa20.41■□□□□ 0.86
LINC00221-201ENST00000603633 KCPQ6ZWJ8 1503 aa20.4■□□□□ 0.86
LINC00221-201ENST00000603633 CYP19A1P11511 503 aaPredicted RBP20.39■□□□□ 0.86
LINC00221-201ENST00000603633 RTCBQ9Y3I0 505 aaKnown RBP20.39■□□□□ 0.86
LINC00221-201ENST00000603633 RREB1Q92766 1687 aa20.39■□□□□ 0.85
LINC00221-201ENST00000603633 SSFA2P28290 1259 aa20.38■□□□□ 0.85
LINC00221-201ENST00000603633 CRKLP46109 303 aaKnown RBP20.38■□□□□ 0.85
LINC00221-201ENST00000603633 SENP3-EIF4A1A0A087X0R7 540 aa20.38■□□□□ 0.85
LINC00221-201ENST00000603633 PSDA5PKW4 1024 aaPredicted RBP20.38■□□□□ 0.85
LINC00221-201ENST00000603633 GNPATO15228 680 aa20.38■□□□□ 0.85
LINC00221-201ENST00000603633 GIGYF1O75420 1035 aaPredicted RBP20.38■□□□□ 0.85
LINC00221-201ENST00000603633 CCDC87Q9NVE4 849 aa20.38■□□□□ 0.85
LINC00221-201ENST00000603633 LY75O60449 1722 aa20.37■□□□□ 0.85
LINC00221-201ENST00000603633 RPS6KA4O75676 772 aa20.37■□□□□ 0.85
LINC00221-201ENST00000603633 ADRA2BP18089 450 aa20.37■□□□□ 0.85
LINC00221-201ENST00000603633 MBIPQ9NS73 344 aa20.37■□□□□ 0.85
LINC00221-201ENST00000603633 INTS5Q6P9B9 1019 aaKnown RBP20.35■□□□□ 0.85
LINC00221-201ENST00000603633 SLC16A10Q8TF71 515 aa20.35■□□□□ 0.85
LINC00221-201ENST00000603633 CHMP4AQ9BY43 222 aa20.35■□□□□ 0.85
LINC00221-201ENST00000603633 HOXB7P09629 217 aa20.35■□□□□ 0.85
LINC00221-201ENST00000603633 TRAPPC3LQ5T215 181 aa20.35■□□□□ 0.85
LINC00221-201ENST00000603633 PAPPAQ13219 1627 aa20.34■□□□□ 0.85
LINC00221-201ENST00000603633 PNPLA7Q6ZV29 1317 aa20.34■□□□□ 0.85
LINC00221-201ENST00000603633 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.34■□□□□ 0.85
LINC00221-201ENST00000603633 NPM2Q86SE8 214 aaKnown RBP20.34■□□□□ 0.85
LINC00221-201ENST00000603633 MYH16Q9H6N6 1097 aa20.34■□□□□ 0.85
LINC00221-201ENST00000603633 USP16Q9Y5T5 823 aa20.34■□□□□ 0.85
LINC00221-201ENST00000603633 NUP188Q5SRE5 1749 aa20.34■□□□□ 0.85
LINC00221-201ENST00000603633 ZNF521Q96K83 1311 aa20.33■□□□□ 0.85
LINC00221-201ENST00000603633 ZNF831Q5JPB2 1677 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms