RNA–Protein interactions for RNA: ENST00000602540.5

PHLDA1-202, Transcript of pleckstrin homology like domain family A member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHLDA1, Length 5,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA1-202ENST00000602540 CCDC85AQ96PX6 553 aaPredicted RBP21.87■■□□□ 1.09
PHLDA1-202ENST00000602540 EXOC6BQ9Y2D4 811 aa21.87■■□□□ 1.09
PHLDA1-202ENST00000602540 ZNF652Q9Y2D9 606 aa21.87■■□□□ 1.09
PHLDA1-202ENST00000602540 POGZQ7Z3K3 1410 aa21.86■■□□□ 1.09
PHLDA1-202ENST00000602540 TRIM21P19474 475 aaKnown RBP21.86■■□□□ 1.09
PHLDA1-202ENST00000602540 NUDT16Q96DE0 195 aaKnown RBP21.86■■□□□ 1.09
PHLDA1-202ENST00000602540 TNIP1Q15025 636 aa21.86■■□□□ 1.09
PHLDA1-202ENST00000602540 HECW1Q76N89 1606 aa21.85■■□□□ 1.09
PHLDA1-202ENST00000602540 LARP1Q6PKG0 1096 aaKnown RBP21.85■■□□□ 1.09
PHLDA1-202ENST00000602540 CAVIN4Q5BKX8 364 aa21.85■■□□□ 1.09
PHLDA1-202ENST00000602540 IFIT1P09914 478 aaKnown RBP21.84■■□□□ 1.09
PHLDA1-202ENST00000602540 CETN2P41208 172 aa21.84■■□□□ 1.09
PHLDA1-202ENST00000602540 CCDC83Q8IWF9 413 aa21.84■■□□□ 1.09
PHLDA1-202ENST00000602540 CCDC61Q9Y6R9 512 aa21.84■■□□□ 1.09
PHLDA1-202ENST00000602540 CCDC196A0A1B0GTZ2 297 aa21.83■■□□□ 1.09
PHLDA1-202ENST00000602540 PRPF40BQ6NWY9 871 aaKnown RBP21.83■■□□□ 1.09
PHLDA1-202ENST00000602540 HSP90AB3PQ58FF7 597 aa21.83■■□□□ 1.09
PHLDA1-202ENST00000602540 CCDC102AQ96A19 550 aa21.83■■□□□ 1.09
PHLDA1-202ENST00000602540 DAPK1P53355 1430 aa21.83■■□□□ 1.09
PHLDA1-202ENST00000602540 NCAPD3P42695 1498 aa21.83■■□□□ 1.09
PHLDA1-202ENST00000602540 KIF2AO00139 706 aaPredicted RBP21.83■■□□□ 1.09
PHLDA1-202ENST00000602540 SSR1P43307 286 aaKnown RBP21.83■■□□□ 1.09
PHLDA1-202ENST00000602540 PHAXQ9H814 394 aaKnown RBP21.83■■□□□ 1.08
PHLDA1-202ENST00000602540 POLR3DP05423 398 aaPredicted RBP21.83■■□□□ 1.08
PHLDA1-202ENST00000602540 ZC3H6P61129 1189 aaKnown RBP21.83■■□□□ 1.08
PHLDA1-202ENST00000602540 ALDH1L2Q3SY69 923 aa21.83■■□□□ 1.08
PHLDA1-202ENST00000602540 SPA17Q15506 151 aa21.82■■□□□ 1.08
PHLDA1-202ENST00000602540 TSG101Q99816 390 aa21.82■■□□□ 1.08
PHLDA1-202ENST00000602540 DNAI2Q9GZS0 605 aa21.82■■□□□ 1.08
PHLDA1-202ENST00000602540 CAMK4Q16566 473 aa21.82■■□□□ 1.08
PHLDA1-202ENST00000602540 UBXN4Q92575 508 aa21.82■■□□□ 1.08
PHLDA1-202ENST00000602540 GBP3Q9H0R5 595 aa21.82■■□□□ 1.08
PHLDA1-202ENST00000602540 SH2B1Q9NRF2 756 aaPredicted RBP21.82■■□□□ 1.08
PHLDA1-202ENST00000602540 SYCE3A1L190 88 aa21.81■■□□□ 1.08
PHLDA1-202ENST00000602540 XPCQ01831 940 aaPredicted RBP21.81■■□□□ 1.08
PHLDA1-202ENST00000602540 ANO10Q9NW15 660 aa21.81■■□□□ 1.08
PHLDA1-202ENST00000602540 FKBP15Q5T1M5 1219 aa21.81■■□□□ 1.08
PHLDA1-202ENST00000602540 HMGB1P09429 215 aaKnown RBP21.81■■□□□ 1.08
PHLDA1-202ENST00000602540 SCAND2PQ9GZW5 306 aaPredicted RBP21.81■■□□□ 1.08
PHLDA1-202ENST00000602540 MKNK2Q9HBH9 465 aa21.81■■□□□ 1.08
PHLDA1-202ENST00000602540 TMOD3Q9NYL9 352 aa21.81■■□□□ 1.08
PHLDA1-202ENST00000602540 ZSCAN12O43309 604 aa21.81■■□□□ 1.08
PHLDA1-202ENST00000602540 NAPBQ9H115 298 aa21.8■■□□□ 1.08
PHLDA1-202ENST00000602540 MIS18AQ9NYP9 233 aa21.8■■□□□ 1.08
PHLDA1-202ENST00000602540 MCM10Q7L590 875 aa21.8■■□□□ 1.08
PHLDA1-202ENST00000602540 POLA1P09884 1462 aaPredicted RBP21.8■■□□□ 1.08
PHLDA1-202ENST00000602540 SFPQP23246 707 aaKnown RBP eCLIP21.8■■□□□ 1.08
PHLDA1-202ENST00000602540 PLEKHH1Q9ULM0 1364 aa21.8■■□□□ 1.08
PHLDA1-202ENST00000602540 MINDY4BA8MYZ0 360 aa21.8■■□□□ 1.08
PHLDA1-202ENST00000602540 ESPNB1AK53 854 aa21.8■■□□□ 1.08
PHLDA1-202ENST00000602540 CRACR2BQ8N4Y2 399 aaPredicted RBP21.8■■□□□ 1.08
PHLDA1-202ENST00000602540 FERMT3Q86UX7 667 aa21.79■■□□□ 1.08
PHLDA1-202ENST00000602540 MYD88Q99836 296 aa21.79■■□□□ 1.08
PHLDA1-202ENST00000602540 ABCC11Q96J66 1382 aa21.79■■□□□ 1.08
PHLDA1-202ENST00000602540 TAF7Q15545 349 aaPredicted RBP21.79■■□□□ 1.08
PHLDA1-202ENST00000602540 AMOTQ4VCS5 1084 aa21.79■■□□□ 1.08
PHLDA1-202ENST00000602540 CTCFLQ8NI51 663 aaPredicted RBP21.78■■□□□ 1.08
PHLDA1-202ENST00000602540 BOLA2Q9H3K6 86 aa21.78■■□□□ 1.08
PHLDA1-202ENST00000602540 CCDC183Q5T5S1 534 aa21.78■■□□□ 1.08
PHLDA1-202ENST00000602540 MAP3K12Q12852 859 aa21.78■■□□□ 1.08
PHLDA1-202ENST00000602540 USP8P40818 1118 aa21.78■■□□□ 1.08
PHLDA1-202ENST00000602540 ZPR1O75312 459 aa21.77■■□□□ 1.08
PHLDA1-202ENST00000602540 C8orf76Q96K31 380 aa21.77■■□□□ 1.08
PHLDA1-202ENST00000602540 IFT140Q96RY7 1462 aa21.77■■□□□ 1.08
PHLDA1-202ENST00000602540 SMARCA5O60264 1052 aaPredicted RBP21.77■■□□□ 1.08
PHLDA1-202ENST00000602540 PPP4R3AQ6IN85 833 aa21.77■■□□□ 1.08
PHLDA1-202ENST00000602540 RAB34Q9BZG1 259 aa21.77■■□□□ 1.08
PHLDA1-202ENST00000602540 RAPGEF3O95398 923 aa21.77■■□□□ 1.07
PHLDA1-202ENST00000602540 CRACR2AQ9BSW2 395 aa21.77■■□□□ 1.07
PHLDA1-202ENST00000602540 FGFR1OPO95684 399 aaKnown RBP21.76■■□□□ 1.07
PHLDA1-202ENST00000602540 VPS36Q86VN1 386 aa21.76■■□□□ 1.07
PHLDA1-202ENST00000602540 PDCL2Q8N4E4 241 aa21.76■■□□□ 1.07
PHLDA1-202ENST00000602540 DZIP1Q86YF9 867 aaKnown RBP21.76■■□□□ 1.07
PHLDA1-202ENST00000602540 IFIT5Q13325 482 aaKnown RBP21.75■■□□□ 1.07
PHLDA1-202ENST00000602540 PTPN14Q15678 1187 aa21.75■■□□□ 1.07
PHLDA1-202ENST00000602540 CACNA2D4Q7Z3S7 1137 aa21.75■■□□□ 1.07
PHLDA1-202ENST00000602540 KIF5CO60282 957 aa21.75■■□□□ 1.07
PHLDA1-202ENST00000602540 PTCD1O75127 700 aaKnown RBP21.75■■□□□ 1.07
PHLDA1-202ENST00000602540 SLC5A1P13866 664 aa21.75■■□□□ 1.07
PHLDA1-202ENST00000602540 ZSCAN30Q86W11 494 aa21.75■■□□□ 1.07
PHLDA1-202ENST00000602540 TMCO3Q6UWJ1 677 aa21.75■■□□□ 1.07
PHLDA1-202ENST00000602540 THUMPD2Q9BTF0 503 aaKnown RBP21.75■■□□□ 1.07
PHLDA1-202ENST00000602540 IQCA1Q86XH1 822 aa21.75■■□□□ 1.07
PHLDA1-202ENST00000602540 SUPT6HQ7KZ85 1726 aaKnown RBP21.75■■□□□ 1.07
PHLDA1-202ENST00000602540 MRC2Q9UBG0 1479 aa21.75■■□□□ 1.07
PHLDA1-202ENST00000602540 TMEM266Q2M3C6 531 aa21.75■■□□□ 1.07
PHLDA1-202ENST00000602540 CCDC91Q7Z6B0 441 aa21.75■■□□□ 1.07
PHLDA1-202ENST00000602540 IL27Q8NEV9 243 aa21.75■■□□□ 1.07
PHLDA1-202ENST00000602540 SLC12A7Q9Y666 1083 aa21.75■■□□□ 1.07
PHLDA1-202ENST00000602540 RNF41Q9H4P4 317 aaPredicted RBP21.74■■□□□ 1.07
PHLDA1-202ENST00000602540 INCENPQ9NQS7 918 aa21.74■■□□□ 1.07
PHLDA1-202ENST00000602540 TAF3Q5VWG9 929 aa21.74■■□□□ 1.07
PHLDA1-202ENST00000602540 CTAGE5O15320 804 aa21.74■■□□□ 1.07
PHLDA1-202ENST00000602540 PIP4K2BP78356 416 aa21.74■■□□□ 1.07
PHLDA1-202ENST00000602540 KLHL10Q6JEL2 608 aa21.73■■□□□ 1.07
PHLDA1-202ENST00000602540 ZNF444Q8N0Y2 327 aaPredicted RBP21.73■■□□□ 1.07
PHLDA1-202ENST00000602540 ANKIB1Q9P2G1 1089 aa21.73■■□□□ 1.07
PHLDA1-202ENST00000602540 ZNF213O14771 459 aa21.73■■□□□ 1.07
PHLDA1-202ENST00000602540 KIF20AO95235 890 aa21.73■■□□□ 1.07
PHLDA1-202ENST00000602540 CASQ1P31415 396 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms