RNA–Protein interactions for RNA: ENST00000602498.1

HCG18-243, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 327 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-243ENST00000602498 ERVV-2B6SEH9 535 aa7.64□□□□□ -1.19
HCG18-243ENST00000602498 HSP90AB1P08238 724 aaKnown RBP7.64□□□□□ -1.19
HCG18-243ENST00000602498 WNK3Q9BYP7 1800 aa7.64□□□□□ -1.19
HCG18-243ENST00000602498 RNMTO43148 476 aaKnown RBP7.63□□□□□ -1.19
HCG18-243ENST00000602498 PPP2R1AP30153 589 aa7.63□□□□□ -1.19
HCG18-243ENST00000602498 AKAP4Q5JQC9 854 aa7.63□□□□□ -1.19
HCG18-243ENST00000602498 SLC16A10Q8TF71 515 aa7.63□□□□□ -1.19
HCG18-243ENST00000602498 KIF20BQ96Q89 1820 aa7.62□□□□□ -1.19
HCG18-243ENST00000602498 RGPD2P0DJD1 1756 aa7.62□□□□□ -1.19
HCG18-243ENST00000602498 U2AF1L5P0DN76 240 aaPredicted RBP7.62□□□□□ -1.19
HCG18-243ENST00000602498 PRKAR2BP31323 418 aa7.62□□□□□ -1.19
HCG18-243ENST00000602498 U2AF1Q01081 240 aaKnown RBP eCLIP7.62□□□□□ -1.19
HCG18-243ENST00000602498 TRAPPC3LQ5T215 181 aa7.62□□□□□ -1.19
HCG18-243ENST00000602498 DNAJC10Q8IXB1 793 aa7.62□□□□□ -1.19
HCG18-243ENST00000602498 PHACTR3Q96KR7 559 aa7.62□□□□□ -1.19
HCG18-243ENST00000602498 SRP68Q9UHB9 627 aaKnown RBP7.62□□□□□ -1.19
HCG18-243ENST00000602498 KDRP35968 1356 aa7.61□□□□□ -1.19
HCG18-243ENST00000602498 PAPPAQ13219 1627 aa7.61□□□□□ -1.19
HCG18-243ENST00000602498 YBX3P16989 372 aaKnown RBP eCLIP7.61□□□□□ -1.19
HCG18-243ENST00000602498 SSFA2P28290 1259 aa7.61□□□□□ -1.19
HCG18-243ENST00000602498 CRKLP46109 303 aaKnown RBP7.61□□□□□ -1.19
HCG18-243ENST00000602498 DDX10Q13206 875 aaKnown RBP7.61□□□□□ -1.19
HCG18-243ENST00000602498 FLAD1Q8NFF5 587 aa7.61□□□□□ -1.19
HCG18-243ENST00000602498 ARHGEF1Q92888 912 aaKnown RBP7.61□□□□□ -1.19
HCG18-243ENST00000602498 CFAP53Q96M91 514 aa7.61□□□□□ -1.19
HCG18-243ENST00000602498 SLC52A2Q9HAB3 445 aa7.61□□□□□ -1.19
HCG18-243ENST00000602498 RTCBQ9Y3I0 505 aaKnown RBP7.61□□□□□ -1.19
HCG18-243ENST00000602498 ZNF330Q9Y3S2 320 aaPredicted RBP7.61□□□□□ -1.19
HCG18-243ENST00000602498 BTAF1O14981 1849 aa7.61□□□□□ -1.19
HCG18-243ENST00000602498 SBF2Q86WG5 1849 aa7.6□□□□□ -1.19
HCG18-243ENST00000602498 KCNQ3O43525 872 aa7.6□□□□□ -1.19
HCG18-243ENST00000602498 MMP10P09238 476 aa7.6□□□□□ -1.19
HCG18-243ENST00000602498 RFC4P35249 363 aa7.6□□□□□ -1.19
HCG18-243ENST00000602498 DCTN1Q14203 1278 aa7.6□□□□□ -1.19
HCG18-243ENST00000602498 IL17REQ8NFR9 667 aa7.6□□□□□ -1.19
HCG18-243ENST00000602498 DOT1LQ8TEK3 1739 aa7.6□□□□□ -1.19
HCG18-243ENST00000602498 CANXP27824 592 aaKnown RBP7.59□□□□□ -1.19
HCG18-243ENST00000602498 PIP4K2AP48426 406 aaPredicted RBP7.59□□□□□ -1.19
HCG18-243ENST00000602498 INTS5Q6P9B9 1019 aaKnown RBP7.59□□□□□ -1.19
HCG18-243ENST00000602498 MCM10Q7L590 875 aa7.59□□□□□ -1.19
HCG18-243ENST00000602498 RSPH6AQ9H0K4 717 aa7.59□□□□□ -1.19
HCG18-243ENST00000602498 CASZ1Q86V15 1759 aa7.59□□□□□ -1.2
HCG18-243ENST00000602498 NPC1L1Q9UHC9 1359 aa7.59□□□□□ -1.2
HCG18-243ENST00000602498 SHANK3Q9BYB0 1731 aa7.58□□□□□ -1.2
HCG18-243ENST00000602498 GNAT3A8MTJ3 354 aa7.58□□□□□ -1.2
HCG18-243ENST00000602498 RPS6KA4O75676 772 aa7.58□□□□□ -1.2
HCG18-243ENST00000602498 GYS1P13807 737 aa7.58□□□□□ -1.2
HCG18-243ENST00000602498 TEFQ10587 303 aa7.58□□□□□ -1.2
HCG18-243ENST00000602498 FKBP8Q14318 412 aa7.58□□□□□ -1.2
HCG18-243ENST00000602498 TTC5Q8N0Z6 440 aa7.58□□□□□ -1.2
HCG18-243ENST00000602498 GAS2L2Q8NHY3 880 aa7.58□□□□□ -1.2
HCG18-243ENST00000602498 MIS18AQ9NYP9 233 aa7.58□□□□□ -1.2
HCG18-243ENST00000602498 NUDCQ9Y266 331 aa7.58□□□□□ -1.2
HCG18-243ENST00000602498 ZBTB1Q9Y2K1 713 aa7.58□□□□□ -1.2
HCG18-243ENST00000602498 CNTNAP4Q9C0A0 1308 aa7.57□□□□□ -1.2
HCG18-243ENST00000602498 COL3A1P02461 1466 aaPredicted RBP7.57□□□□□ -1.2
HCG18-243ENST00000602498 A0A0G2JLW4 131 aa7.57□□□□□ -1.2
HCG18-243ENST00000602498 PRAMEF22A3QJZ6 481 aa7.57□□□□□ -1.2
HCG18-243ENST00000602498 USPL1Q5W0Q7 1092 aa7.57□□□□□ -1.2
HCG18-243ENST00000602498 BICDL1Q6ZP65 573 aa7.57□□□□□ -1.2
HCG18-243ENST00000602498 ZNF784Q8NCA9 323 aaPredicted RBP7.57□□□□□ -1.2
HCG18-243ENST00000602498 ZNF496Q96IT1 587 aaPredicted RBP7.57□□□□□ -1.2
HCG18-243ENST00000602498 THUMPD2Q9BTF0 503 aaKnown RBP7.57□□□□□ -1.2
HCG18-243ENST00000602498 CCDC87Q9NVE4 849 aa7.57□□□□□ -1.2
HCG18-243ENST00000602498 TOGARAM1Q9Y4F4 1720 aa7.57□□□□□ -1.2
HCG18-243ENST00000602498 MAP3K5Q99683 1374 aa7.57□□□□□ -1.2
HCG18-243ENST00000602498 KAT6BQ8WYB5 2073 aa7.56□□□□□ -1.2
HCG18-243ENST00000602498 RGPD3A6NKT7 1758 aaPredicted RBP7.56□□□□□ -1.2
HCG18-243ENST00000602498 RGPD4Q7Z3J3 1758 aa7.56□□□□□ -1.2
HCG18-243ENST00000602498 BTBD11A6QL63 1104 aa7.56□□□□□ -1.2
HCG18-243ENST00000602498 CYP19A1P11511 503 aaPredicted RBP7.56□□□□□ -1.2
HCG18-243ENST00000602498 DPEP1P16444 411 aa7.56□□□□□ -1.2
HCG18-243ENST00000602498 DDR1Q08345 913 aa7.56□□□□□ -1.2
HCG18-243ENST00000602498 RC3H1Q5TC82 1133 aaKnown RBP7.56□□□□□ -1.2
HCG18-243ENST00000602498 CCDC24Q8N4L8 307 aa7.56□□□□□ -1.2
HCG18-243ENST00000602498 ZNF526Q8TF50 670 aaPredicted RBP7.56□□□□□ -1.2
HCG18-243ENST00000602498 RTF1Q92541 710 aaKnown RBP7.56□□□□□ -1.2
HCG18-243ENST00000602498 CD2APQ9Y5K6 639 aa7.56□□□□□ -1.2
HCG18-243ENST00000602498 PARP3Q9Y6F1 533 aa7.56□□□□□ -1.2
HCG18-243ENST00000602498 SENP3-EIF4A1A0A087X0R7 540 aa7.55□□□□□ -1.2
HCG18-243ENST00000602498 ZPR1O75312 459 aa7.55□□□□□ -1.2
HCG18-243ENST00000602498 A1BGP04217 495 aa7.55□□□□□ -1.2
HCG18-243ENST00000602498 ZNF790Q6PG37 636 aa7.55□□□□□ -1.2
HCG18-243ENST00000602498 CCDC146Q8IYE0 955 aa7.55□□□□□ -1.2
HCG18-243ENST00000602498 NLGN1Q8N2Q7 840 aa7.55□□□□□ -1.2
HCG18-243ENST00000602498 RNF216Q9NWF9 866 aaPredicted RBP7.55□□□□□ -1.2
HCG18-243ENST00000602498 BCS1LQ9Y276 419 aa7.55□□□□□ -1.2
HCG18-243ENST00000602498 RRP7AQ9Y3A4 280 aaKnown RBP7.55□□□□□ -1.2
HCG18-243ENST00000602498 ANKRD26Q9UPS8 1709 aa7.55□□□□□ -1.2
HCG18-243ENST00000602498 SOS1Q07889 1333 aaPredicted RBP7.54□□□□□ -1.2
HCG18-243ENST00000602498 USP42Q9H9J4 1324 aaKnown RBP7.54□□□□□ -1.2
HCG18-243ENST00000602498 UTRNP46939 3433 aa7.54□□□□□ -1.2
HCG18-243ENST00000602498 FCHSD2O94868 740 aa7.54□□□□□ -1.2
HCG18-243ENST00000602498 HMGB2P26583 209 aaKnown RBP7.54□□□□□ -1.2
HCG18-243ENST00000602498 CHRNA5P30532 468 aa7.54□□□□□ -1.2
HCG18-243ENST00000602498 POTEDQ86YR6 584 aa7.54□□□□□ -1.2
HCG18-243ENST00000602498 BCL2L12Q9HB09 334 aa7.54□□□□□ -1.2
HCG18-243ENST00000602498 TBC1D2BQ9UPU7 963 aa7.54□□□□□ -1.2
HCG18-243ENST00000602498 PKD1L3Q7Z443 1732 aa7.54□□□□□ -1.2
HCG18-243ENST00000602498 PLEKHG2Q9H7P9 1386 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms