RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 MTFR1LQ9H019 292 aa21.2■□□□□ 0.98
PPFIA4-213ENST00000601609 PNPLA7Q6ZV29 1317 aa21.2■□□□□ 0.98
PPFIA4-213ENST00000601609 QSER1Q2KHR3 1735 aa21.2■□□□□ 0.98
PPFIA4-213ENST00000601609 TAF1LQ8IZX4 1826 aa21.2■□□□□ 0.98
PPFIA4-213ENST00000601609 RALBP1Q15311 655 aa21.19■□□□□ 0.98
PPFIA4-213ENST00000601609 NFATC2IPQ8NCF5 419 aa21.19■□□□□ 0.98
PPFIA4-213ENST00000601609 C4BP0C0L5 1744 aa21.18■□□□□ 0.98
PPFIA4-213ENST00000601609 RSPH6AQ9H0K4 717 aa21.18■□□□□ 0.98
PPFIA4-213ENST00000601609 RNMTO43148 476 aaKnown RBP21.17■□□□□ 0.98
PPFIA4-213ENST00000601609 LGR6Q9HBX8 967 aa21.17■□□□□ 0.98
PPFIA4-213ENST00000601609 MAP3K5Q99683 1374 aa21.17■□□□□ 0.98
PPFIA4-213ENST00000601609 VIRMAQ69YN4 1812 aaKnown RBP21.17■□□□□ 0.98
PPFIA4-213ENST00000601609 SRCAPQ6ZRS2 3230 aa21.17■□□□□ 0.98
PPFIA4-213ENST00000601609 NEFMP07197 916 aa21.16■□□□□ 0.98
PPFIA4-213ENST00000601609 SLC52A2Q9HAB3 445 aa21.16■□□□□ 0.98
PPFIA4-213ENST00000601609 PTCD1O75127 700 aaKnown RBP21.15■□□□□ 0.98
PPFIA4-213ENST00000601609 PHF14O94880 888 aa21.15■□□□□ 0.98
PPFIA4-213ENST00000601609 LINC00116Q8NCU8 138 aa21.15■□□□□ 0.98
PPFIA4-213ENST00000601609 GNAT3A8MTJ3 354 aa21.14■□□□□ 0.97
PPFIA4-213ENST00000601609 ITPK1Q13572 414 aa21.14■□□□□ 0.97
PPFIA4-213ENST00000601609 SLC16A10Q8TF71 515 aa21.14■□□□□ 0.97
PPFIA4-213ENST00000601609 FCHSD2O94868 740 aa21.13■□□□□ 0.97
PPFIA4-213ENST00000601609 POLD1P28340 1107 aa21.13■□□□□ 0.97
PPFIA4-213ENST00000601609 COL23A1Q86Y22 540 aaPredicted RBP21.13■□□□□ 0.97
PPFIA4-213ENST00000601609 FLAD1Q8NFF5 587 aa21.13■□□□□ 0.97
PPFIA4-213ENST00000601609 PHACTR3Q96KR7 559 aa21.13■□□□□ 0.97
PPFIA4-213ENST00000601609 MRC1P22897 1456 aa21.13■□□□□ 0.97
PPFIA4-213ENST00000601609 MYBBP1AQ9BQG0 1328 aaKnown RBP21.12■□□□□ 0.97
PPFIA4-213ENST00000601609 GNPATO15228 680 aa21.12■□□□□ 0.97
PPFIA4-213ENST00000601609 PTGER2P43116 358 aa21.12■□□□□ 0.97
PPFIA4-213ENST00000601609 TEFQ10587 303 aa21.12■□□□□ 0.97
PPFIA4-213ENST00000601609 KLHL34Q8N239 644 aa21.11■□□□□ 0.97
PPFIA4-213ENST00000601609 RTF1Q92541 710 aaKnown RBP21.1■□□□□ 0.97
PPFIA4-213ENST00000601609 ADAMTS7Q9UKP4 1686 aa21.09■□□□□ 0.97
PPFIA4-213ENST00000601609 SLC39A6Q13433 755 aa21.09■□□□□ 0.97
PPFIA4-213ENST00000601609 MSL1Q68DK7 614 aa21.09■□□□□ 0.97
PPFIA4-213ENST00000601609 ARXQ96QS3 562 aa21.09■□□□□ 0.97
PPFIA4-213ENST00000601609 UBR3Q6ZT12 1888 aa21.09■□□□□ 0.97
PPFIA4-213ENST00000601609 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.08■□□□□ 0.97
PPFIA4-213ENST00000601609 SMIM5Q71RC9 77 aa21.08■□□□□ 0.97
PPFIA4-213ENST00000601609 TTC5Q8N0Z6 440 aa21.08■□□□□ 0.97
PPFIA4-213ENST00000601609 SLC4A9Q96Q91 983 aa21.08■□□□□ 0.97
PPFIA4-213ENST00000601609 ZNF831Q5JPB2 1677 aa21.08■□□□□ 0.96
PPFIA4-213ENST00000601609 MAPK8IP3Q9UPT6 1336 aa21.07■□□□□ 0.96
PPFIA4-213ENST00000601609 SSFA2P28290 1259 aa21.07■□□□□ 0.96
PPFIA4-213ENST00000601609 PNNQ9H307 717 aaKnown RBP21.07■□□□□ 0.96
PPFIA4-213ENST00000601609 COL5A3P25940 1745 aaPredicted RBP21.07■□□□□ 0.96
PPFIA4-213ENST00000601609 IL17REQ8NFR9 667 aa21.06■□□□□ 0.96
PPFIA4-213ENST00000601609 RTCBQ9Y3I0 505 aaKnown RBP21.06■□□□□ 0.96
PPFIA4-213ENST00000601609 ZNF316A6NFI3 1004 aaPredicted RBP21.05■□□□□ 0.96
PPFIA4-213ENST00000601609 AMIGO3Q86WK7 504 aa21.05■□□□□ 0.96
PPFIA4-213ENST00000601609 SGIP1Q9BQI5 828 aa21.05■□□□□ 0.96
PPFIA4-213ENST00000601609 FHDC1Q9C0D6 1143 aaPredicted RBP21.05■□□□□ 0.96
PPFIA4-213ENST00000601609 CNTNAP4Q9C0A0 1308 aa21.04■□□□□ 0.96
PPFIA4-213ENST00000601609 TJP1Q07157 1748 aa21.04■□□□□ 0.96
PPFIA4-213ENST00000601609 DCAF8L1A6NGE4 600 aa21.04■□□□□ 0.96
PPFIA4-213ENST00000601609 WDR43Q15061 677 aaKnown RBP eCLIP21.03■□□□□ 0.96
PPFIA4-213ENST00000601609 MCM10Q7L590 875 aa21.03■□□□□ 0.96
PPFIA4-213ENST00000601609 PRKRIP1Q9H875 184 aaPredicted RBP21.03■□□□□ 0.96
PPFIA4-213ENST00000601609 CRKLP46109 303 aaKnown RBP21.02■□□□□ 0.96
PPFIA4-213ENST00000601609 TRAPPC3LQ5T215 181 aa21.02■□□□□ 0.96
PPFIA4-213ENST00000601609 DNAJC10Q8IXB1 793 aa21.02■□□□□ 0.96
PPFIA4-213ENST00000601609 KCPQ6ZWJ8 1503 aa21.02■□□□□ 0.96
PPFIA4-213ENST00000601609 BTBD11A6QL63 1104 aa21.01■□□□□ 0.95
PPFIA4-213ENST00000601609 RC3H1Q5TC82 1133 aaKnown RBP21.01■□□□□ 0.95
PPFIA4-213ENST00000601609 CEMIPQ8WUJ3 1361 aa21■□□□□ 0.95
PPFIA4-213ENST00000601609 DCTN1Q14203 1278 aa21■□□□□ 0.95
PPFIA4-213ENST00000601609 CICQ96RK0 1608 aaPredicted RBP21■□□□□ 0.95
PPFIA4-213ENST00000601609 SIPA1L3O60292 1781 aaPredicted RBP21■□□□□ 0.95
PPFIA4-213ENST00000601609 COL24A1Q17RW2 1714 aa20.99■□□□□ 0.95
PPFIA4-213ENST00000601609 RPS6KA4O75676 772 aa20.99■□□□□ 0.95
PPFIA4-213ENST00000601609 RFC4P35249 363 aa20.99■□□□□ 0.95
PPFIA4-213ENST00000601609 SYT17Q9BSW7 474 aa20.99■□□□□ 0.95
PPFIA4-213ENST00000601609 UBR2Q8IWV8 1755 aa20.98■□□□□ 0.95
PPFIA4-213ENST00000601609 HTATSF1O43719 755 aaKnown RBP20.98■□□□□ 0.95
PPFIA4-213ENST00000601609 ADRA2BP18089 450 aa20.98■□□□□ 0.95
PPFIA4-213ENST00000601609 NFE2L2Q16236 605 aa20.98■□□□□ 0.95
PPFIA4-213ENST00000601609 ZNF790Q6PG37 636 aa20.98■□□□□ 0.95
PPFIA4-213ENST00000601609 PLEKHF1Q96S99 279 aa20.98■□□□□ 0.95
PPFIA4-213ENST00000601609 CCDC87Q9NVE4 849 aa20.98■□□□□ 0.95
PPFIA4-213ENST00000601609 MYH14Q7Z406 1995 aaKnown RBP20.97■□□□□ 0.95
PPFIA4-213ENST00000601609 DLG5Q8TDM6 1919 aa20.96■□□□□ 0.95
PPFIA4-213ENST00000601609 VSIG10Q8N0Z9 540 aa20.96■□□□□ 0.95
PPFIA4-213ENST00000601609 ARHGEF1Q92888 912 aaKnown RBP20.96■□□□□ 0.95
PPFIA4-213ENST00000601609 ZNF496Q96IT1 587 aaPredicted RBP20.96■□□□□ 0.95
PPFIA4-213ENST00000601609 FMNL2Q96PY5 1086 aa20.96■□□□□ 0.95
PPFIA4-213ENST00000601609 CCDC146Q8IYE0 955 aa20.95■□□□□ 0.94
PPFIA4-213ENST00000601609 HEG1Q9ULI3 1381 aa20.95■□□□□ 0.94
PPFIA4-213ENST00000601609 STARD3NLO95772 234 aa20.94■□□□□ 0.94
PPFIA4-213ENST00000601609 CYP19A1P11511 503 aaPredicted RBP20.94■□□□□ 0.94
PPFIA4-213ENST00000601609 C4AP0C0L4 1744 aa20.94■□□□□ 0.94
PPFIA4-213ENST00000601609 KCNQ3O43525 872 aa20.93■□□□□ 0.94
PPFIA4-213ENST00000601609 INTS5Q6P9B9 1019 aaKnown RBP20.93■□□□□ 0.94
PPFIA4-213ENST00000601609 CANXP27824 592 aaKnown RBP20.92■□□□□ 0.94
PPFIA4-213ENST00000601609 PELP1Q8IZL8 1130 aaKnown RBP20.92■□□□□ 0.94
PPFIA4-213ENST00000601609 TEX13AQ9BXU3 409 aaPredicted RBP20.92■□□□□ 0.94
PPFIA4-213ENST00000601609 ZBTB1Q9Y2K1 713 aa20.92■□□□□ 0.94
PPFIA4-213ENST00000601609 ZNF330Q9Y3S2 320 aaPredicted RBP20.92■□□□□ 0.94
PPFIA4-213ENST00000601609 ANP32CO43423 234 aa20.91■□□□□ 0.94
PPFIA4-213ENST00000601609 RIPK4P57078 832 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms