RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 RXRBP28702 533 aa29.93■■■□□ 2.38
IRF3-227ENST00000600911 CFAP44Q96MT7 982 aa29.93■■■□□ 2.38
IRF3-227ENST00000600911 IFT57Q9NWB7 429 aa29.93■■■□□ 2.38
IRF3-227ENST00000600911 SLC52A2Q9HAB3 445 aa29.92■■■□□ 2.38
IRF3-227ENST00000600911 CHL1O00533 1208 aa29.91■■■□□ 2.38
IRF3-227ENST00000600911 NFATC2IPQ8NCF5 419 aa29.91■■■□□ 2.38
IRF3-227ENST00000600911 SBF2Q86WG5 1849 aa29.91■■■□□ 2.38
IRF3-227ENST00000600911 KCNQ3O43525 872 aa29.9■■■□□ 2.38
IRF3-227ENST00000600911 PAPPAQ13219 1627 aa29.89■■■□□ 2.38
IRF3-227ENST00000600911 TEFQ10587 303 aa29.89■■■□□ 2.38
IRF3-227ENST00000600911 GNAI1P63096 354 aa29.89■■■□□ 2.37
IRF3-227ENST00000600911 TAF7Q15545 349 aaPredicted RBP29.89■■■□□ 2.37
IRF3-227ENST00000600911 KRT24Q2M2I5 525 aa29.88■■■□□ 2.37
IRF3-227ENST00000600911 ACSBG1Q96GR2 724 aa29.88■■■□□ 2.37
IRF3-227ENST00000600911 EP400Q96L91 3159 aa29.87■■■□□ 2.37
IRF3-227ENST00000600911 CALD1Q05682 793 aaKnown RBP29.87■■■□□ 2.37
IRF3-227ENST00000600911 ERVV-2B6SEH9 535 aa29.85■■■□□ 2.37
IRF3-227ENST00000600911 CABP4P57796 275 aa29.85■■■□□ 2.37
IRF3-227ENST00000600911 SLC39A6Q13433 755 aa29.85■■■□□ 2.37
IRF3-227ENST00000600911 PTF1AQ7RTS3 328 aa29.85■■■□□ 2.37
IRF3-227ENST00000600911 TSPYL4Q9UJ04 414 aa29.85■■■□□ 2.37
IRF3-227ENST00000600911 KCNQ2O43526 872 aa29.84■■■□□ 2.37
IRF3-227ENST00000600911 EXOSC9Q06265 439 aaKnown RBP29.84■■■□□ 2.37
IRF3-227ENST00000600911 BTBD11A6QL63 1104 aa29.83■■■□□ 2.37
IRF3-227ENST00000600911 PRIM1P49642 420 aaKnown RBP29.83■■■□□ 2.37
IRF3-227ENST00000600911 PIGBQ92521 554 aa29.83■■■□□ 2.37
IRF3-227ENST00000600911 MYH16Q9H6N6 1097 aa29.83■■■□□ 2.37
IRF3-227ENST00000600911 NHSQ6T4R5 1651 aa29.83■■■□□ 2.37
IRF3-227ENST00000600911 UBR2Q8IWV8 1755 aa29.83■■■□□ 2.37
IRF3-227ENST00000600911 KRT27Q7Z3Y8 459 aa29.82■■■□□ 2.36
IRF3-227ENST00000600911 BCL9O00512 1426 aa29.82■■■□□ 2.36
IRF3-227ENST00000600911 TSPYL6Q8N831 410 aa29.82■■■□□ 2.36
IRF3-227ENST00000600911 C8orf58Q8NAV2 365 aa29.8■■■□□ 2.36
IRF3-227ENST00000600911 SYTL4Q96C24 671 aaPredicted RBP29.8■■■□□ 2.36
IRF3-227ENST00000600911 C5P01031 1676 aa29.78■■■□□ 2.36
IRF3-227ENST00000600911 TMOD3Q9NYL9 352 aa29.78■■■□□ 2.36
IRF3-227ENST00000600911 BTAF1O14981 1849 aa29.78■■■□□ 2.36
IRF3-227ENST00000600911 KCPQ6ZWJ8 1503 aa29.78■■■□□ 2.36
IRF3-227ENST00000600911 ELL2O00472 640 aaPredicted RBP29.77■■■□□ 2.36
IRF3-227ENST00000600911 EIF4A1P60842 406 aaKnown RBP29.76■■■□□ 2.35
IRF3-227ENST00000600911 ZNF790Q6PG37 636 aa29.76■■■□□ 2.35
IRF3-227ENST00000600911 BABAM1Q9NWV8 329 aa29.76■■■□□ 2.35
IRF3-227ENST00000600911 ASAP1Q9ULH1 1129 aa29.76■■■□□ 2.35
IRF3-227ENST00000600911 ATG3Q9NT62 314 aa29.74■■■□□ 2.35
IRF3-227ENST00000600911 PRAMEF22A3QJZ6 481 aa29.73■■■□□ 2.35
IRF3-227ENST00000600911 CENPBP07199 599 aaPredicted RBP29.73■■■□□ 2.35
IRF3-227ENST00000600911 HEG1Q9ULI3 1381 aa29.72■■■□□ 2.35
IRF3-227ENST00000600911 ZNF496Q96IT1 587 aaPredicted RBP29.71■■■□□ 2.35
IRF3-227ENST00000600911 VAMP4O75379 141 aa29.7■■■□□ 2.34
IRF3-227ENST00000600911 TWISTNBQ3B726 338 aaPredicted RBP29.68■■■□□ 2.34
IRF3-227ENST00000600911 PTCD1O75127 700 aaKnown RBP29.66■■■□□ 2.34
IRF3-227ENST00000600911 FAM196AQ6ZSG2 479 aa29.66■■■□□ 2.34
IRF3-227ENST00000600911 SLC4A9Q96Q91 983 aa29.66■■■□□ 2.34
IRF3-227ENST00000600911 TJP1Q07157 1748 aa29.65■■■□□ 2.34
IRF3-227ENST00000600911 TCERG1O14776 1098 aaKnown RBP29.65■■■□□ 2.34
IRF3-227ENST00000600911 TTC5Q8N0Z6 440 aa29.65■■■□□ 2.34
IRF3-227ENST00000600911 LAMB4A4D0S4 1761 aa29.65■■■□□ 2.34
IRF3-227ENST00000600911 GIGYF1O75420 1035 aaPredicted RBP29.63■■■□□ 2.33
IRF3-227ENST00000600911 TRIM37O94972 964 aa29.63■■■□□ 2.33
IRF3-227ENST00000600911 TNS1Q9HBL0 1735 aaKnown RBP29.63■■■□□ 2.33
IRF3-227ENST00000600911 BCL2L13Q9BXK5 485 aa29.63■■■□□ 2.33
IRF3-227ENST00000600911 RCAN3Q9UKA8 241 aa29.63■■■□□ 2.33
IRF3-227ENST00000600911 LY75O60449 1722 aa29.62■■■□□ 2.33
IRF3-227ENST00000600911 BCAR3O75815 825 aa29.61■■■□□ 2.33
IRF3-227ENST00000600911 RARSP54136 660 aaKnown RBP29.61■■■□□ 2.33
IRF3-227ENST00000600911 NECTIN2Q92692 538 aa29.61■■■□□ 2.33
IRF3-227ENST00000600911 FMNL2Q96PY5 1086 aa29.61■■■□□ 2.33
IRF3-227ENST00000600911 PALLDQ8WX93 1383 aa29.6■■■□□ 2.33
IRF3-227ENST00000600911 SSH1Q8WYL5 1049 aa29.59■■■□□ 2.33
IRF3-227ENST00000600911 RBM42Q9BTD8 480 aaKnown RBP29.59■■■□□ 2.33
IRF3-227ENST00000600911 BCL11BQ9C0K0 894 aaPredicted RBP29.59■■■□□ 2.33
IRF3-227ENST00000600911 USP16Q9Y5T5 823 aa29.59■■■□□ 2.33
IRF3-227ENST00000600911 CT47B1P0C2W7 299 aaPredicted RBP29.56■■■□□ 2.32
IRF3-227ENST00000600911 EIF2S2P20042 333 aaKnown RBP29.56■■■□□ 2.32
IRF3-227ENST00000600911 KCNQ4P56696 695 aa29.56■■■□□ 2.32
IRF3-227ENST00000600911 CICQ96RK0 1608 aaPredicted RBP29.56■■■□□ 2.32
IRF3-227ENST00000600911 SUPT16HQ9Y5B9 1047 aaKnown RBP29.55■■■□□ 2.32
IRF3-227ENST00000600911 SNRPA1P09661 255 aaKnown RBP29.54■■■□□ 2.32
IRF3-227ENST00000600911 DNAJC10Q8IXB1 793 aa29.54■■■□□ 2.32
IRF3-227ENST00000600911 COL5A3P25940 1745 aaPredicted RBP29.54■■■□□ 2.32
IRF3-227ENST00000600911 HOXB7P09629 217 aa29.53■■■□□ 2.32
IRF3-227ENST00000600911 HDGFL1Q5TGJ6 251 aa29.53■■■□□ 2.32
IRF3-227ENST00000600911 ZNF831Q5JPB2 1677 aa29.52■■■□□ 2.32
IRF3-227ENST00000600911 TAF1LQ8IZX4 1826 aa29.52■■■□□ 2.32
IRF3-227ENST00000600911 LOC102724428A0A0B4J2F2 783 aa29.52■■■□□ 2.32
IRF3-227ENST00000600911 ANXA1P04083 346 aa29.52■■■□□ 2.32
IRF3-227ENST00000600911 PIP4K2AP48426 406 aaPredicted RBP29.52■■■□□ 2.32
IRF3-227ENST00000600911 SIK1P57059 783 aa29.52■■■□□ 2.32
IRF3-227ENST00000600911 ITPK1Q13572 414 aa29.52■■■□□ 2.32
IRF3-227ENST00000600911 MRPL50Q8N5N7 158 aaKnown RBP29.52■■■□□ 2.32
IRF3-227ENST00000600911 PROSER3Q2NL68 480 aa29.51■■■□□ 2.31
IRF3-227ENST00000600911 MYH14Q7Z406 1995 aaKnown RBP29.51■■■□□ 2.31
IRF3-227ENST00000600911 PLIN1O60240 522 aa29.5■■■□□ 2.31
IRF3-227ENST00000600911 SMARCC1Q92922 1105 aaPredicted RBP29.49■■■□□ 2.31
IRF3-227ENST00000600911 SMC4Q9NTJ3 1288 aa29.49■■■□□ 2.31
IRF3-227ENST00000600911 PDIA6Q15084 440 aa29.49■■■□□ 2.31
IRF3-227ENST00000600911 ALDH1L2Q3SY69 923 aa29.49■■■□□ 2.31
IRF3-227ENST00000600911 VSIG10Q8N0Z9 540 aa29.49■■■□□ 2.31
IRF3-227ENST00000600911 CHPF2Q9P2E5 772 aa29.49■■■□□ 2.31
IRF3-227ENST00000600911 TNNQ9UQP3 1299 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms