RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 RREB1Q92766 1687 aa17.13■□□□□ 0.33
SRRM1-223ENST00000600523 SCN11AQ9UI33 1791 aa17.12■□□□□ 0.33
SRRM1-223ENST00000600523 RIPK4P57078 832 aa17.12■□□□□ 0.33
SRRM1-223ENST00000600523 DIEXFQ68CQ4 756 aaKnown RBP17.12■□□□□ 0.33
SRRM1-223ENST00000600523 IL17REQ8NFR9 667 aa17.12■□□□□ 0.33
SRRM1-223ENST00000600523 RBM42Q9BTD8 480 aaKnown RBP17.12■□□□□ 0.33
SRRM1-223ENST00000600523 LOC102724428A0A0B4J2F2 783 aa17.11■□□□□ 0.33
SRRM1-223ENST00000600523 ATP6V1AP38606 617 aa17.11■□□□□ 0.33
SRRM1-223ENST00000600523 SIK1P57059 783 aa17.11■□□□□ 0.33
SRRM1-223ENST00000600523 R3HDM1Q15032 1099 aaKnown RBP17.11■□□□□ 0.33
SRRM1-223ENST00000600523 NUP188Q5SRE5 1749 aa17.1■□□□□ 0.33
SRRM1-223ENST00000600523 TMPOP42166 694 aaKnown RBP17.1■□□□□ 0.33
SRRM1-223ENST00000600523 MCM10Q7L590 875 aa17.1■□□□□ 0.33
SRRM1-223ENST00000600523 MRC1P22897 1456 aa17.1■□□□□ 0.33
SRRM1-223ENST00000600523 BTBD11A6QL63 1104 aa17.09■□□□□ 0.33
SRRM1-223ENST00000600523 PTCD1O75127 700 aaKnown RBP17.09■□□□□ 0.33
SRRM1-223ENST00000600523 SLC15A2Q16348 729 aa17.09■□□□□ 0.33
SRRM1-223ENST00000600523 PNISRQ8TF01 805 aaKnown RBP17.09■□□□□ 0.33
SRRM1-223ENST00000600523 CEMIPQ8WUJ3 1361 aa17.09■□□□□ 0.33
SRRM1-223ENST00000600523 LY75O60449 1722 aa17.08■□□□□ 0.32
SRRM1-223ENST00000600523 PSDA5PKW4 1024 aaPredicted RBP17.08■□□□□ 0.32
SRRM1-223ENST00000600523 NEUROD2Q15784 382 aa17.08■□□□□ 0.32
SRRM1-223ENST00000600523 LRRC4BQ9NT99 713 aa17.08■□□□□ 0.32
SRRM1-223ENST00000600523 TFCP2L1Q9NZI6 479 aa17.08■□□□□ 0.32
SRRM1-223ENST00000600523 ADAMTS7Q9UKP4 1686 aa17.07■□□□□ 0.32
SRRM1-223ENST00000600523 TAF7Q15545 349 aaPredicted RBP17.07■□□□□ 0.32
SRRM1-223ENST00000600523 CCDC184Q52MB2 194 aa17.07■□□□□ 0.32
SRRM1-223ENST00000600523 AK7Q96M32 723 aa17.07■□□□□ 0.32
SRRM1-223ENST00000600523 KCNQ4P56696 695 aa17.06■□□□□ 0.32
SRRM1-223ENST00000600523 DCTN1Q14203 1278 aa17.06■□□□□ 0.32
SRRM1-223ENST00000600523 ZNF790Q6PG37 636 aa17.06■□□□□ 0.32
SRRM1-223ENST00000600523 CCER2I3L3R5 266 aa17.05■□□□□ 0.32
SRRM1-223ENST00000600523 CALD1Q05682 793 aaKnown RBP17.05■□□□□ 0.32
SRRM1-223ENST00000600523 SLC39A6Q13433 755 aa17.05■□□□□ 0.32
SRRM1-223ENST00000600523 FAM9BQ8IZU0 186 aa17.05■□□□□ 0.32
SRRM1-223ENST00000600523 FLAD1Q8NFF5 587 aa17.05■□□□□ 0.32
SRRM1-223ENST00000600523 RRP7AQ9Y3A4 280 aaKnown RBP17.05■□□□□ 0.32
SRRM1-223ENST00000600523 APAF1O14727 1248 aa17.04■□□□□ 0.32
SRRM1-223ENST00000600523 VSIG10Q8N0Z9 540 aa17.04■□□□□ 0.32
SRRM1-223ENST00000600523 FMNL2Q96PY5 1086 aa17.04■□□□□ 0.32
SRRM1-223ENST00000600523 TEX13AQ9BXU3 409 aaPredicted RBP17.04■□□□□ 0.32
SRRM1-223ENST00000600523 ANO8Q9HCE9 1232 aaPredicted RBP17.04■□□□□ 0.32
SRRM1-223ENST00000600523 VIRMAQ69YN4 1812 aaKnown RBP17.04■□□□□ 0.32
SRRM1-223ENST00000600523 AKT1S1Q96B36 256 aa17.03■□□□□ 0.32
SRRM1-223ENST00000600523 MSH5O43196 834 aa17.02■□□□□ 0.32
SRRM1-223ENST00000600523 STARD3NLO95772 234 aa17.02■□□□□ 0.32
SRRM1-223ENST00000600523 C5P01031 1676 aa17.01■□□□□ 0.31
SRRM1-223ENST00000600523 ZNF827Q17R98 1081 aa17.01■□□□□ 0.31
SRRM1-223ENST00000600523 BABAM1Q9NWV8 329 aa17.01■□□□□ 0.31
SRRM1-223ENST00000600523 PAPPAQ13219 1627 aa17■□□□□ 0.31
SRRM1-223ENST00000600523 DLG5Q8TDM6 1919 aa17■□□□□ 0.31
SRRM1-223ENST00000600523 GNPATO15228 680 aa17■□□□□ 0.31
SRRM1-223ENST00000600523 ITPK1Q13572 414 aa17■□□□□ 0.31
SRRM1-223ENST00000600523 RC3H1Q5TC82 1133 aaKnown RBP17■□□□□ 0.31
SRRM1-223ENST00000600523 NPM2Q86SE8 214 aaKnown RBP17■□□□□ 0.31
SRRM1-223ENST00000600523 LINC00116Q8NCU8 138 aa17■□□□□ 0.31
SRRM1-223ENST00000600523 THUMPD2Q9BTF0 503 aaKnown RBP17■□□□□ 0.31
SRRM1-223ENST00000600523 TSPYL4Q9UJ04 414 aa17■□□□□ 0.31
SRRM1-223ENST00000600523 RTCBQ9Y3I0 505 aaKnown RBP17■□□□□ 0.31
SRRM1-223ENST00000600523 ZNF831Q5JPB2 1677 aa17■□□□□ 0.31
SRRM1-223ENST00000600523 NGEFQ8N5V2 710 aa16.99■□□□□ 0.31
SRRM1-223ENST00000600523 ZNF496Q96IT1 587 aaPredicted RBP16.99■□□□□ 0.31
SRRM1-223ENST00000600523 HEG1Q9ULI3 1381 aa16.99■□□□□ 0.31
SRRM1-223ENST00000600523 CNTNAP4Q9C0A0 1308 aa16.98■□□□□ 0.31
SRRM1-223ENST00000600523 SNRPA1P09661 255 aaKnown RBP16.98■□□□□ 0.31
SRRM1-223ENST00000600523 SSFA2P28290 1259 aa16.98■□□□□ 0.31
SRRM1-223ENST00000600523 SLC16A10Q8TF71 515 aa16.98■□□□□ 0.31
SRRM1-223ENST00000600523 LAS1LQ9Y4W2 734 aaKnown RBP16.98■□□□□ 0.31
SRRM1-223ENST00000600523 C4BP0C0L5 1744 aa16.98■□□□□ 0.31
SRRM1-223ENST00000600523 SIPA1L3O60292 1781 aaPredicted RBP16.97■□□□□ 0.31
SRRM1-223ENST00000600523 NCBP3Q53F19 620 aaKnown RBP16.97■□□□□ 0.31
SRRM1-223ENST00000600523 DNAJC10Q8IXB1 793 aa16.97■□□□□ 0.31
SRRM1-223ENST00000600523 SLC4A9Q96Q91 983 aa16.97■□□□□ 0.31
SRRM1-223ENST00000600523 SPON1Q9HCB6 807 aa16.97■□□□□ 0.31
SRRM1-223ENST00000600523 TRIM35Q9UPQ4 493 aa16.97■□□□□ 0.31
SRRM1-223ENST00000600523 KCPQ6ZWJ8 1503 aa16.96■□□□□ 0.31
SRRM1-223ENST00000600523 PHF14O94880 888 aa16.96■□□□□ 0.31
SRRM1-223ENST00000600523 ADRA2BP18089 450 aa16.96■□□□□ 0.31
SRRM1-223ENST00000600523 CRKLP46109 303 aaKnown RBP16.96■□□□□ 0.31
SRRM1-223ENST00000600523 TRAPPC3LQ5T215 181 aa16.96■□□□□ 0.31
SRRM1-223ENST00000600523 MTFR1LQ9H019 292 aa16.96■□□□□ 0.31
SRRM1-223ENST00000600523 CCDC87Q9NVE4 849 aa16.96■□□□□ 0.31
SRRM1-223ENST00000600523 MIS18AQ9NYP9 233 aa16.96■□□□□ 0.31
SRRM1-223ENST00000600523 TAF1LQ8IZX4 1826 aa16.96■□□□□ 0.3
SRRM1-223ENST00000600523 PNPLA7Q6ZV29 1317 aa16.96■□□□□ 0.3
SRRM1-223ENST00000600523 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.95■□□□□ 0.3
SRRM1-223ENST00000600523 RPS6KA4O75676 772 aa16.95■□□□□ 0.3
SRRM1-223ENST00000600523 CCDC27Q2M243 656 aa16.95■□□□□ 0.3
SRRM1-223ENST00000600523 KCNQ3O43525 872 aa16.94■□□□□ 0.3
SRRM1-223ENST00000600523 CYP19A1P11511 503 aaPredicted RBP16.94■□□□□ 0.3
SRRM1-223ENST00000600523 RFC4P35249 363 aa16.94■□□□□ 0.3
SRRM1-223ENST00000600523 GNAI1P63096 354 aa16.94■□□□□ 0.3
SRRM1-223ENST00000600523 UBR2Q8IWV8 1755 aa16.94■□□□□ 0.3
SRRM1-223ENST00000600523 ZBTB7AO95365 584 aa16.93■□□□□ 0.3
SRRM1-223ENST00000600523 POLD1P28340 1107 aa16.93■□□□□ 0.3
SRRM1-223ENST00000600523 MIER1Q8N108 512 aa16.93■□□□□ 0.3
SRRM1-223ENST00000600523 CFAP44Q96MT7 982 aa16.93■□□□□ 0.3
SRRM1-223ENST00000600523 PPP1R1BQ9UD71 204 aaPredicted RBP16.93■□□□□ 0.3
SRRM1-223ENST00000600523 QSER1Q2KHR3 1735 aa16.93■□□□□ 0.3
SRRM1-223ENST00000600523 CICQ96RK0 1608 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms