RNA–Protein interactions for RNA: ENST00000600499.5

LTBP4-228, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-228ENST00000600499 NFATC2IPQ8NCF5 419 aa19.33■□□□□ 0.68
LTBP4-228ENST00000600499 NUP188Q5SRE5 1749 aa19.33■□□□□ 0.68
LTBP4-228ENST00000600499 SIPA1L3O60292 1781 aaPredicted RBP19.32■□□□□ 0.68
LTBP4-228ENST00000600499 TMPOP42166 694 aaKnown RBP19.32■□□□□ 0.68
LTBP4-228ENST00000600499 ATG3Q9NT62 314 aa19.32■□□□□ 0.68
LTBP4-228ENST00000600499 PALLDQ8WX93 1383 aa19.32■□□□□ 0.68
LTBP4-228ENST00000600499 ZNF831Q5JPB2 1677 aa19.31■□□□□ 0.68
LTBP4-228ENST00000600499 ASAP1Q9ULH1 1129 aa19.31■□□□□ 0.68
LTBP4-228ENST00000600499 PAPPAQ13219 1627 aa19.3■□□□□ 0.68
LTBP4-228ENST00000600499 NCBP3Q53F19 620 aaKnown RBP19.3■□□□□ 0.68
LTBP4-228ENST00000600499 RTF1Q92541 710 aaKnown RBP19.3■□□□□ 0.68
LTBP4-228ENST00000600499 LRRC4BQ9NT99 713 aa19.3■□□□□ 0.68
LTBP4-228ENST00000600499 HMGB2P26583 209 aaKnown RBP19.29■□□□□ 0.68
LTBP4-228ENST00000600499 CCDC146Q8IYE0 955 aa19.29■□□□□ 0.68
LTBP4-228ENST00000600499 RIPK4P57078 832 aa19.28■□□□□ 0.68
LTBP4-228ENST00000600499 TEFQ10587 303 aa19.27■□□□□ 0.68
LTBP4-228ENST00000600499 MCM10Q7L590 875 aa19.27■□□□□ 0.68
LTBP4-228ENST00000600499 CICQ96RK0 1608 aaPredicted RBP19.26■□□□□ 0.67
LTBP4-228ENST00000600499 LOC102724428A0A0B4J2F2 783 aa19.26■□□□□ 0.67
LTBP4-228ENST00000600499 SIK1P57059 783 aa19.26■□□□□ 0.67
LTBP4-228ENST00000600499 LMOD3Q0VAK6 560 aa19.26■□□□□ 0.67
LTBP4-228ENST00000600499 UBR2Q8IWV8 1755 aa19.25■□□□□ 0.67
LTBP4-228ENST00000600499 DCTN1Q14203 1278 aa19.25■□□□□ 0.67
LTBP4-228ENST00000600499 CCNL1Q9UK58 526 aaPredicted RBP19.25■□□□□ 0.67
LTBP4-228ENST00000600499 TRIM35Q9UPQ4 493 aa19.25■□□□□ 0.67
LTBP4-228ENST00000600499 TAF1LQ8IZX4 1826 aa19.24■□□□□ 0.67
LTBP4-228ENST00000600499 APAF1O14727 1248 aa19.24■□□□□ 0.67
LTBP4-228ENST00000600499 SLC4A9Q96Q91 983 aa19.24■□□□□ 0.67
LTBP4-228ENST00000600499 TAF7Q15545 349 aaPredicted RBP19.23■□□□□ 0.67
LTBP4-228ENST00000600499 NBPF14Q5TI25 921 aa19.23■□□□□ 0.67
LTBP4-228ENST00000600499 MIER1Q8N108 512 aa19.23■□□□□ 0.67
LTBP4-228ENST00000600499 KCPQ6ZWJ8 1503 aa19.23■□□□□ 0.67
LTBP4-228ENST00000600499 CCDC27Q2M243 656 aa19.22■□□□□ 0.67
LTBP4-228ENST00000600499 ZNF790Q6PG37 636 aa19.22■□□□□ 0.67
LTBP4-228ENST00000600499 VSIG10Q8N0Z9 540 aa19.22■□□□□ 0.67
LTBP4-228ENST00000600499 AKT1S1Q96B36 256 aa19.22■□□□□ 0.67
LTBP4-228ENST00000600499 ANO8Q9HCE9 1232 aaPredicted RBP19.22■□□□□ 0.67
LTBP4-228ENST00000600499 BABAM1Q9NWV8 329 aa19.22■□□□□ 0.67
LTBP4-228ENST00000600499 C5P01031 1676 aa19.21■□□□□ 0.67
LTBP4-228ENST00000600499 SLC39A6Q13433 755 aa19.21■□□□□ 0.67
LTBP4-228ENST00000600499 RRP7AQ9Y3A4 280 aaKnown RBP19.21■□□□□ 0.67
LTBP4-228ENST00000600499 BTBD11A6QL63 1104 aa19.2■□□□□ 0.66
LTBP4-228ENST00000600499 SLC15A2Q16348 729 aa19.2■□□□□ 0.66
LTBP4-228ENST00000600499 ATP6V1AP38606 617 aa19.19■□□□□ 0.66
LTBP4-228ENST00000600499 KCNQ4P56696 695 aa19.19■□□□□ 0.66
LTBP4-228ENST00000600499 ITPK1Q13572 414 aa19.19■□□□□ 0.66
LTBP4-228ENST00000600499 FAM9BQ8IZU0 186 aa19.19■□□□□ 0.66
LTBP4-228ENST00000600499 NGEFQ8N5V2 710 aa19.19■□□□□ 0.66
LTBP4-228ENST00000600499 QSER1Q2KHR3 1735 aa19.19■□□□□ 0.66
LTBP4-228ENST00000600499 COL5A3P25940 1745 aaPredicted RBP19.18■□□□□ 0.66
LTBP4-228ENST00000600499 NEUROD2Q15784 382 aa19.18■□□□□ 0.66
LTBP4-228ENST00000600499 RBM42Q9BTD8 480 aaKnown RBP19.18■□□□□ 0.66
LTBP4-228ENST00000600499 THUMPD2Q9BTF0 503 aaKnown RBP19.18■□□□□ 0.66
LTBP4-228ENST00000600499 KDM3BQ7LBC6 1761 aa19.18■□□□□ 0.66
LTBP4-228ENST00000600499 C4BP0C0L5 1744 aa19.17■□□□□ 0.66
LTBP4-228ENST00000600499 TJP1Q07157 1748 aa19.17■□□□□ 0.66
LTBP4-228ENST00000600499 PTCD1O75127 700 aaKnown RBP19.17■□□□□ 0.66
LTBP4-228ENST00000600499 ZNF827Q17R98 1081 aa19.17■□□□□ 0.66
LTBP4-228ENST00000600499 RC3H1Q5TC82 1133 aaKnown RBP19.17■□□□□ 0.66
LTBP4-228ENST00000600499 TTC5Q8N0Z6 440 aa19.17■□□□□ 0.66
LTBP4-228ENST00000600499 ZNF496Q96IT1 587 aaPredicted RBP19.17■□□□□ 0.66
LTBP4-228ENST00000600499 STK32BQ9NY57 414 aa19.17■□□□□ 0.66
LTBP4-228ENST00000600499 HEG1Q9ULI3 1381 aa19.17■□□□□ 0.66
LTBP4-228ENST00000600499 KCNQ3O43525 872 aa19.16■□□□□ 0.66
LTBP4-228ENST00000600499 LINC00116Q8NCU8 138 aa19.16■□□□□ 0.66
LTBP4-228ENST00000600499 CHL1O00533 1208 aa19.15■□□□□ 0.66
LTBP4-228ENST00000600499 FMNL2Q96PY5 1086 aa19.15■□□□□ 0.66
LTBP4-228ENST00000600499 CNTNAP4Q9C0A0 1308 aa19.15■□□□□ 0.66
LTBP4-228ENST00000600499 ZNF853P0CG23 659 aa19.14■□□□□ 0.65
LTBP4-228ENST00000600499 R3HDM1Q15032 1099 aaKnown RBP19.14■□□□□ 0.65
LTBP4-228ENST00000600499 CALD1Q05682 793 aaKnown RBP19.13■□□□□ 0.65
LTBP4-228ENST00000600499 WWC1Q8IX03 1113 aa19.13■□□□□ 0.65
LTBP4-228ENST00000600499 CFAP44Q96MT7 982 aa19.13■□□□□ 0.65
LTBP4-228ENST00000600499 TEX13AQ9BXU3 409 aaPredicted RBP19.13■□□□□ 0.65
LTBP4-228ENST00000600499 MYH14Q7Z406 1995 aaKnown RBP19.13■□□□□ 0.65
LTBP4-228ENST00000600499 UBR3Q6ZT12 1888 aa19.12■□□□□ 0.65
LTBP4-228ENST00000600499 TUBGCP6Q96RT7 1819 aa19.12■□□□□ 0.65
LTBP4-228ENST00000600499 CASZ1Q86V15 1759 aa19.12■□□□□ 0.65
LTBP4-228ENST00000600499 CYP19A1P11511 503 aaPredicted RBP19.12■□□□□ 0.65
LTBP4-228ENST00000600499 EIF4A1P60842 406 aaKnown RBP19.12■□□□□ 0.65
LTBP4-228ENST00000600499 DNAJC10Q8IXB1 793 aa19.12■□□□□ 0.65
LTBP4-228ENST00000600499 MIS18AQ9NYP9 233 aa19.12■□□□□ 0.65
LTBP4-228ENST00000600499 PNPLA7Q6ZV29 1317 aa19.11■□□□□ 0.65
LTBP4-228ENST00000600499 IFT57Q9NWB7 429 aa19.11■□□□□ 0.65
LTBP4-228ENST00000600499 IL16Q14005 1332 aa19.1■□□□□ 0.65
LTBP4-228ENST00000600499 PSDA5PKW4 1024 aaPredicted RBP19.1■□□□□ 0.65
LTBP4-228ENST00000600499 SNRPA1P09661 255 aaKnown RBP19.1■□□□□ 0.65
LTBP4-228ENST00000600499 FLAD1Q8NFF5 587 aa19.1■□□□□ 0.65
LTBP4-228ENST00000600499 TFCP2L1Q9NZI6 479 aa19.1■□□□□ 0.65
LTBP4-228ENST00000600499 TSPYL4Q9UJ04 414 aa19.1■□□□□ 0.65
LTBP4-228ENST00000600499 RPS6KA4O75676 772 aa19.09■□□□□ 0.65
LTBP4-228ENST00000600499 SSFA2P28290 1259 aa19.09■□□□□ 0.65
LTBP4-228ENST00000600499 CRKLP46109 303 aaKnown RBP19.09■□□□□ 0.65
LTBP4-228ENST00000600499 INTS5Q6P9B9 1019 aaKnown RBP19.09■□□□□ 0.65
LTBP4-228ENST00000600499 WDR63Q8IWG1 891 aa19.09■□□□□ 0.65
LTBP4-228ENST00000600499 AK7Q96M32 723 aa19.09■□□□□ 0.65
LTBP4-228ENST00000600499 ZNF521Q96K83 1311 aa19.08■□□□□ 0.65
LTBP4-228ENST00000600499 GIGYF1O75420 1035 aaPredicted RBP19.08■□□□□ 0.64
LTBP4-228ENST00000600499 GNAI1P63096 354 aa19.08■□□□□ 0.64
LTBP4-228ENST00000600499 STARD3NLO95772 234 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 209.1 ms