RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 PTCH1Q13635 1447 aa19.27■□□□□ 0.67
SYDE1-204ENST00000600440 STX6O43752 255 aa19.26■□□□□ 0.67
SYDE1-204ENST00000600440 CCDC192P0DO97 292 aa19.26■□□□□ 0.67
SYDE1-204ENST00000600440 SYT1P21579 422 aa19.26■□□□□ 0.67
SYDE1-204ENST00000600440 TIGD1Q96MW7 591 aa19.26■□□□□ 0.67
SYDE1-204ENST00000600440 SMC3Q9UQE7 1217 aa19.26■□□□□ 0.67
SYDE1-204ENST00000600440 F6X3S4 739 aa19.26■□□□□ 0.67
SYDE1-204ENST00000600440 TERF2Q15554 542 aa19.26■□□□□ 0.67
SYDE1-204ENST00000600440 RPAP2Q8IXW5 612 aaPredicted RBP19.26■□□□□ 0.67
SYDE1-204ENST00000600440 AEBP1Q8IUX7 1158 aa19.26■□□□□ 0.67
SYDE1-204ENST00000600440 KRT222Q8N1A0 295 aa19.26■□□□□ 0.67
SYDE1-204ENST00000600440 KIF18AQ8NI77 898 aa19.26■□□□□ 0.67
SYDE1-204ENST00000600440 MSH6P52701 1360 aa19.25■□□□□ 0.67
SYDE1-204ENST00000600440 SBNO2Q9Y2G9 1366 aa19.25■□□□□ 0.67
SYDE1-204ENST00000600440 SMTNL1A8MU46 457 aa19.25■□□□□ 0.67
SYDE1-204ENST00000600440 FAM173BQ6P4H8 233 aa19.25■□□□□ 0.67
SYDE1-204ENST00000600440 CFAP65Q6ZU64 1925 aaKnown RBP19.25■□□□□ 0.67
SYDE1-204ENST00000600440 MAP3K4Q9Y6R4 1608 aa19.25■□□□□ 0.67
SYDE1-204ENST00000600440 C14orf93Q9H972 538 aaKnown RBP19.24■□□□□ 0.67
SYDE1-204ENST00000600440 TRMT1Q9NXH9 659 aaKnown RBP19.24■□□□□ 0.67
SYDE1-204ENST00000600440 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.24■□□□□ 0.67
SYDE1-204ENST00000600440 TPM3P06753 285 aa19.24■□□□□ 0.67
SYDE1-204ENST00000600440 UNC5CLQ8IV45 518 aa19.24■□□□□ 0.67
SYDE1-204ENST00000600440 BRPF1P55201 1214 aaPredicted RBP19.23■□□□□ 0.67
SYDE1-204ENST00000600440 CCDC83Q8IWF9 413 aa19.23■□□□□ 0.67
SYDE1-204ENST00000600440 IL25Q9H293 177 aa19.23■□□□□ 0.67
SYDE1-204ENST00000600440 ZNF215Q9UL58 517 aaPredicted RBP19.23■□□□□ 0.67
SYDE1-204ENST00000600440 TRIM34Q9BYJ4 488 aa19.23■□□□□ 0.67
SYDE1-204ENST00000600440 PIK3R4Q99570 1358 aa19.22■□□□□ 0.67
SYDE1-204ENST00000600440 HMMRO75330 724 aa19.22■□□□□ 0.67
SYDE1-204ENST00000600440 F13A1P00488 732 aa19.22■□□□□ 0.67
SYDE1-204ENST00000600440 ELF2Q15723 593 aa19.22■□□□□ 0.67
SYDE1-204ENST00000600440 KMT5BQ4FZB7 885 aa19.22■□□□□ 0.67
SYDE1-204ENST00000600440 TERF2IPQ9NYB0 399 aa19.22■□□□□ 0.67
SYDE1-204ENST00000600440 NSD2O96028 1365 aa19.22■□□□□ 0.67
SYDE1-204ENST00000600440 CHMLP26374 656 aa19.22■□□□□ 0.67
SYDE1-204ENST00000600440 ZBTB9Q96C00 473 aa19.22■□□□□ 0.67
SYDE1-204ENST00000600440 IL1RAPL2Q9NP60 686 aa19.22■□□□□ 0.67
SYDE1-204ENST00000600440 EMILIN1Q9Y6C2 1016 aa19.22■□□□□ 0.67
SYDE1-204ENST00000600440 CEP135Q66GS9 1140 aa19.21■□□□□ 0.67
SYDE1-204ENST00000600440 GTF3C6Q969F1 213 aa19.21■□□□□ 0.67
SYDE1-204ENST00000600440 SYTL4Q96C24 671 aaPredicted RBP19.21■□□□□ 0.67
SYDE1-204ENST00000600440 RPAP1Q9BWH6 1393 aaPredicted RBP19.21■□□□□ 0.67
SYDE1-204ENST00000600440 GGT6Q6P531 493 aa19.21■□□□□ 0.67
SYDE1-204ENST00000600440 ANO6Q4KMQ2 910 aa19.21■□□□□ 0.67
SYDE1-204ENST00000600440 GOLGA6L4A6NEF3 574 aa19.2■□□□□ 0.66
SYDE1-204ENST00000600440 ARID5BQ14865 1188 aa19.2■□□□□ 0.66
SYDE1-204ENST00000600440 MIS18AQ9NYP9 233 aa19.2■□□□□ 0.66
SYDE1-204ENST00000600440 PPRC1Q5VV67 1664 aaKnown RBP19.2■□□□□ 0.66
SYDE1-204ENST00000600440 AK2P54819 239 aa19.2■□□□□ 0.66
SYDE1-204ENST00000600440 ZSCAN25Q6NSZ9 544 aa19.2■□□□□ 0.66
SYDE1-204ENST00000600440 FAM200AQ8TCP9 573 aa19.2■□□□□ 0.66
SYDE1-204ENST00000600440 FUCA2Q9BTY2 467 aa19.2■□□□□ 0.66
SYDE1-204ENST00000600440 TYRO3Q06418 890 aa19.19■□□□□ 0.66
SYDE1-204ENST00000600440 RTL1A6NKG5 1358 aa19.19■□□□□ 0.66
SYDE1-204ENST00000600440 USP27XA6NNY8 438 aa19.19■□□□□ 0.66
SYDE1-204ENST00000600440 ATP10DQ9P241 1426 aa19.19■□□□□ 0.66
SYDE1-204ENST00000600440 SLC4A2P04920 1241 aa19.19■□□□□ 0.66
SYDE1-204ENST00000600440 MAP3K11Q16584 847 aa19.19■□□□□ 0.66
SYDE1-204ENST00000600440 CACTINQ8WUQ7 758 aaKnown RBP19.19■□□□□ 0.66
SYDE1-204ENST00000600440 NUP62CLQ9H1M0 184 aa19.19■□□□□ 0.66
SYDE1-204ENST00000600440 CLIP2Q9UDT6 1046 aa19.19■□□□□ 0.66
SYDE1-204ENST00000600440 ATP6V1DQ9Y5K8 247 aa19.19■□□□□ 0.66
SYDE1-204ENST00000600440 MORC2Q9Y6X9 1032 aaPredicted RBP19.19■□□□□ 0.66
SYDE1-204ENST00000600440 LIG1P18858 919 aa19.18■□□□□ 0.66
SYDE1-204ENST00000600440 FBXO38Q6PIJ6 1188 aa19.18■□□□□ 0.66
SYDE1-204ENST00000600440 NECTIN2Q92692 538 aa19.18■□□□□ 0.66
SYDE1-204ENST00000600440 FBXW7Q969H0 707 aa19.18■□□□□ 0.66
SYDE1-204ENST00000600440 ZFP91Q96JP5 570 aaPredicted RBP19.18■□□□□ 0.66
SYDE1-204ENST00000600440 QRICH2Q9H0J4 1663 aa19.18■□□□□ 0.66
SYDE1-204ENST00000600440 LARGE1O95461 756 aa19.18■□□□□ 0.66
SYDE1-204ENST00000600440 GJB2P29033 226 aa19.18■□□□□ 0.66
SYDE1-204ENST00000600440 NUTM1Q86Y26 1132 aa19.18■□□□□ 0.66
SYDE1-204ENST00000600440 CABP1Q9NZU7 370 aa19.18■□□□□ 0.66
SYDE1-204ENST00000600440 KNDC1Q76NI1 1749 aa19.18■□□□□ 0.66
SYDE1-204ENST00000600440 RGS12O14924 1447 aa19.17■□□□□ 0.66
SYDE1-204ENST00000600440 HDGFL2Q7Z4V5 671 aaPredicted RBP19.17■□□□□ 0.66
SYDE1-204ENST00000600440 FILIP1Q7Z7B0 1213 aa19.17■□□□□ 0.66
SYDE1-204ENST00000600440 TNMDQ9H2S6 317 aa19.17■□□□□ 0.66
SYDE1-204ENST00000600440 CBX8Q9HC52 389 aa19.17■□□□□ 0.66
SYDE1-204ENST00000600440 TFIP11Q9UBB9 837 aaKnown RBP19.17■□□□□ 0.66
SYDE1-204ENST00000600440 POLKQ9UBT6 870 aa19.17■□□□□ 0.66
SYDE1-204ENST00000600440 PAXIP1Q6ZW49 1069 aaPredicted RBP19.16■□□□□ 0.66
SYDE1-204ENST00000600440 ZNF397Q8NF99 534 aaPredicted RBP19.16■□□□□ 0.66
SYDE1-204ENST00000600440 MCM10Q7L590 875 aa19.16■□□□□ 0.66
SYDE1-204ENST00000600440 NECAB1Q8N987 351 aa19.16■□□□□ 0.66
SYDE1-204ENST00000600440 LRRCC1Q9C099 1032 aa19.16■□□□□ 0.66
SYDE1-204ENST00000600440 SPG7Q9UQ90 795 aa19.16■□□□□ 0.66
SYDE1-204ENST00000600440 MRVI1Q9Y6F6 885 aa19.16■□□□□ 0.66
SYDE1-204ENST00000600440 LRRC7Q96NW7 1537 aa19.16■□□□□ 0.66
SYDE1-204ENST00000600440 CCDC144BQ3MJ40 725 aa19.16■□□□□ 0.66
SYDE1-204ENST00000600440 CCDC144CPQ8IYA2 1237 aa19.16■□□□□ 0.66
SYDE1-204ENST00000600440 TMEM87AQ8NBN3 555 aa19.16■□□□□ 0.66
SYDE1-204ENST00000600440 DNAJC25Q9H1X3 360 aa19.16■□□□□ 0.66
SYDE1-204ENST00000600440 DACT1Q9NYF0 836 aa19.16■□□□□ 0.66
SYDE1-204ENST00000600440 PAXBP1Q9Y5B6 917 aa19.16■□□□□ 0.66
SYDE1-204ENST00000600440 CAPN2P17655 700 aa19.15■□□□□ 0.66
SYDE1-204ENST00000600440 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.15■□□□□ 0.66
SYDE1-204ENST00000600440 POLR3GO15318 223 aaPredicted RBP19.15■□□□□ 0.66
SYDE1-204ENST00000600440 CASTP20810 708 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms