RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 AMOTQ4VCS5 1084 aa25.03■■□□□ 1.6
CCDC9-205ENST00000600117 SPG7Q9UQ90 795 aa25.03■■□□□ 1.6
CCDC9-205ENST00000600117 CYP27B1O15528 508 aa25.02■■□□□ 1.6
CCDC9-205ENST00000600117 NLGN2Q8NFZ4 835 aa25.01■■□□□ 1.59
CCDC9-205ENST00000600117 PCDH11XQ9BZA7 1347 aa25.01■■□□□ 1.59
CCDC9-205ENST00000600117 PCDH11YQ9BZA8 1340 aa25.01■■□□□ 1.59
CCDC9-205ENST00000600117 GRIN3BO60391 1043 aa25■■□□□ 1.59
CCDC9-205ENST00000600117 MTHFSDQ2M296 383 aaKnown RBP25■■□□□ 1.59
CCDC9-205ENST00000600117 DDX54Q8TDD1 881 aaKnown RBP25■■□□□ 1.59
CCDC9-205ENST00000600117 TFCP2L1Q9NZI6 479 aa25■■□□□ 1.59
CCDC9-205ENST00000600117 PNNQ9H307 717 aaKnown RBP24.99■■□□□ 1.59
CCDC9-205ENST00000600117 ZNF530Q6P9A1 599 aaPredicted RBP24.98■■□□□ 1.59
CCDC9-205ENST00000600117 PHKG2P15735 406 aa24.97■■□□□ 1.59
CCDC9-205ENST00000600117 CCDC146Q8IYE0 955 aa24.97■■□□□ 1.59
CCDC9-205ENST00000600117 LY75O60449 1722 aa24.96■■□□□ 1.59
CCDC9-205ENST00000600117 FAM9BQ8IZU0 186 aa24.96■■□□□ 1.59
CCDC9-205ENST00000600117 RUNDC1Q96C34 613 aa24.96■■□□□ 1.59
CCDC9-205ENST00000600117 YBX3P16989 372 aaKnown RBP eCLIP24.95■■□□□ 1.58
CCDC9-205ENST00000600117 IFNL2Q8IZJ0 200 aa24.95■■□□□ 1.58
CCDC9-205ENST00000600117 GAS2L2Q8NHY3 880 aa24.95■■□□□ 1.58
CCDC9-205ENST00000600117 NKX1-1Q15270 411 aaPredicted RBP24.94■■□□□ 1.58
CCDC9-205ENST00000600117 MAPK8IP3Q9UPT6 1336 aa24.93■■□□□ 1.58
CCDC9-205ENST00000600117 NEFMP07197 916 aa24.92■■□□□ 1.58
CCDC9-205ENST00000600117 KCNQ4P56696 695 aa24.92■■□□□ 1.58
CCDC9-205ENST00000600117 AKAP4Q5JQC9 854 aa24.92■■□□□ 1.58
CCDC9-205ENST00000600117 TOGARAM1Q9Y4F4 1720 aa24.92■■□□□ 1.58
CCDC9-205ENST00000600117 NFE2L2Q16236 605 aa24.91■■□□□ 1.58
CCDC9-205ENST00000600117 C1orf141Q5JVX7 400 aa24.91■■□□□ 1.58
CCDC9-205ENST00000600117 KDM6AO15550 1401 aaPredicted RBP24.91■■□□□ 1.58
CCDC9-205ENST00000600117 ATP10DQ9P241 1426 aa24.91■■□□□ 1.58
CCDC9-205ENST00000600117 DOT1LQ8TEK3 1739 aa24.91■■□□□ 1.58
CCDC9-205ENST00000600117 ADAMTS7Q9UKP4 1686 aa24.91■■□□□ 1.58
CCDC9-205ENST00000600117 DLG5Q8TDM6 1919 aa24.9■■□□□ 1.58
CCDC9-205ENST00000600117 SYTL4Q96C24 671 aaPredicted RBP24.9■■□□□ 1.58
CCDC9-205ENST00000600117 PRIM1P49642 420 aaKnown RBP24.89■■□□□ 1.58
CCDC9-205ENST00000600117 HSP90AB1P08238 724 aaKnown RBP24.88■■□□□ 1.57
CCDC9-205ENST00000600117 TMPOP42166 694 aaKnown RBP24.88■■□□□ 1.57
CCDC9-205ENST00000600117 SCN11AQ9UI33 1791 aa24.88■■□□□ 1.57
CCDC9-205ENST00000600117 GNAT3A8MTJ3 354 aa24.87■■□□□ 1.57
CCDC9-205ENST00000600117 DCAF5Q96JK2 942 aa24.87■■□□□ 1.57
CCDC9-205ENST00000600117 VIRMAQ69YN4 1812 aaKnown RBP24.86■■□□□ 1.57
CCDC9-205ENST00000600117 APAF1O14727 1248 aa24.86■■□□□ 1.57
CCDC9-205ENST00000600117 MPRIPQ6WCQ1 1025 aa24.86■■□□□ 1.57
CCDC9-205ENST00000600117 CCNL1Q9UK58 526 aaPredicted RBP24.86■■□□□ 1.57
CCDC9-205ENST00000600117 MSH5O43196 834 aa24.85■■□□□ 1.57
CCDC9-205ENST00000600117 COL23A1Q86Y22 540 aaPredicted RBP24.85■■□□□ 1.57
CCDC9-205ENST00000600117 GPBP1L1Q9HC44 474 aaPredicted RBP24.85■■□□□ 1.57
CCDC9-205ENST00000600117 RRP7AQ9Y3A4 280 aaKnown RBP24.85■■□□□ 1.57
CCDC9-205ENST00000600117 RNMTO43148 476 aaKnown RBP24.84■■□□□ 1.57
CCDC9-205ENST00000600117 LGR6Q9HBX8 967 aa24.84■■□□□ 1.57
CCDC9-205ENST00000600117 HTATSF1O43719 755 aaKnown RBP24.83■■□□□ 1.57
CCDC9-205ENST00000600117 HSPA6P17066 643 aa24.83■■□□□ 1.57
CCDC9-205ENST00000600117 IL17REQ8NFR9 667 aa24.83■■□□□ 1.57
CCDC9-205ENST00000600117 ITGB4P16144 1822 aa24.83■■□□□ 1.57
CCDC9-205ENST00000600117 ADCY9O60503 1353 aa24.82■■□□□ 1.56
CCDC9-205ENST00000600117 RIPK4P57078 832 aa24.82■■□□□ 1.56
CCDC9-205ENST00000600117 CD2APQ9Y5K6 639 aa24.82■■□□□ 1.56
CCDC9-205ENST00000600117 MRC1P22897 1456 aa24.82■■□□□ 1.56
CCDC9-205ENST00000600117 CEMIPQ8WUJ3 1361 aa24.81■■□□□ 1.56
CCDC9-205ENST00000600117 ERVV-2B6SEH9 535 aa24.8■■□□□ 1.56
CCDC9-205ENST00000600117 TRIM35Q9UPQ4 493 aa24.8■■□□□ 1.56
CCDC9-205ENST00000600117 DCTN1Q14203 1278 aa24.79■■□□□ 1.56
CCDC9-205ENST00000600117 NEUROD2Q15784 382 aa24.79■■□□□ 1.56
CCDC9-205ENST00000600117 MSL1Q68DK7 614 aa24.79■■□□□ 1.56
CCDC9-205ENST00000600117 MCM10Q7L590 875 aa24.79■■□□□ 1.56
CCDC9-205ENST00000600117 RTF1Q92541 710 aaKnown RBP24.78■■□□□ 1.56
CCDC9-205ENST00000600117 C5P01031 1676 aa24.78■■□□□ 1.56
CCDC9-205ENST00000600117 SIPA1L3O60292 1781 aaPredicted RBP24.77■■□□□ 1.56
CCDC9-205ENST00000600117 HMGB2P26583 209 aaKnown RBP24.76■■□□□ 1.55
CCDC9-205ENST00000600117 LMOD3Q0VAK6 560 aa24.76■■□□□ 1.55
CCDC9-205ENST00000600117 NCBP3Q53F19 620 aaKnown RBP24.76■■□□□ 1.55
CCDC9-205ENST00000600117 SLC52A2Q9HAB3 445 aa24.76■■□□□ 1.55
CCDC9-205ENST00000600117 CABP4P57796 275 aa24.75■■□□□ 1.55
CCDC9-205ENST00000600117 FLAD1Q8NFF5 587 aa24.75■■□□□ 1.55
CCDC9-205ENST00000600117 PIGBQ92521 554 aa24.75■■□□□ 1.55
CCDC9-205ENST00000600117 THUMPD2Q9BTF0 503 aaKnown RBP24.75■■□□□ 1.55
CCDC9-205ENST00000600117 TAF1LQ8IZX4 1826 aa24.75■■□□□ 1.55
CCDC9-205ENST00000600117 ZNF526Q8TF50 670 aaPredicted RBP24.74■■□□□ 1.55
CCDC9-205ENST00000600117 TMOD3Q9NYL9 352 aa24.74■■□□□ 1.55
CCDC9-205ENST00000600117 CCDC27Q2M243 656 aa24.73■■□□□ 1.55
CCDC9-205ENST00000600117 NFATC2IPQ8NCF5 419 aa24.73■■□□□ 1.55
CCDC9-205ENST00000600117 TEFQ10587 303 aa24.71■■□□□ 1.55
CCDC9-205ENST00000600117 NGEFQ8N5V2 710 aa24.7■■□□□ 1.54
CCDC9-205ENST00000600117 WWC1Q8IX03 1113 aa24.69■■□□□ 1.54
CCDC9-205ENST00000600117 SALL2Q9Y467 1007 aaPredicted RBP24.68■■□□□ 1.54
CCDC9-205ENST00000600117 ATG3Q9NT62 314 aa24.67■■□□□ 1.54
CCDC9-205ENST00000600117 ASAP1Q9ULH1 1129 aa24.67■■□□□ 1.54
CCDC9-205ENST00000600117 TAF7Q15545 349 aaPredicted RBP24.66■■□□□ 1.54
CCDC9-205ENST00000600117 C4BP0C0L5 1744 aa24.66■■□□□ 1.54
CCDC9-205ENST00000600117 PALLDQ8WX93 1383 aa24.66■■□□□ 1.54
CCDC9-205ENST00000600117 ZNF521Q96K83 1311 aa24.65■■□□□ 1.54
CCDC9-205ENST00000600117 UBR3Q6ZT12 1888 aa24.64■■□□□ 1.54
CCDC9-205ENST00000600117 KIF3CO14782 793 aa24.64■■□□□ 1.54
CCDC9-205ENST00000600117 KDM3BQ7LBC6 1761 aa24.63■■□□□ 1.53
CCDC9-205ENST00000600117 UBR2Q8IWV8 1755 aa24.63■■□□□ 1.53
CCDC9-205ENST00000600117 SLC39A6Q13433 755 aa24.63■■□□□ 1.53
CCDC9-205ENST00000600117 KCPQ6ZWJ8 1503 aa24.62■■□□□ 1.53
CCDC9-205ENST00000600117 BTBD11A6QL63 1104 aa24.62■■□□□ 1.53
CCDC9-205ENST00000600117 SMARCC1Q92922 1105 aaPredicted RBP24.62■■□□□ 1.53
CCDC9-205ENST00000600117 AK7Q96M32 723 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms