RNA–Protein interactions for RNA: ENST00000599227.5

ZNF544-213, Transcript of zinc finger protein 544, humanhuman

TSL 1 (best) BASIC

Gene ZNF544, Length 3,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-213ENST00000599227 PNMA6EA0A0J9YXQ4 647 aa13.64□□□□□ -0.23
ZNF544-213ENST00000599227 ZNF853P0CG23 659 aa13.64□□□□□ -0.23
ZNF544-213ENST00000599227 ZSCAN23Q3MJ62 389 aa13.64□□□□□ -0.23
ZNF544-213ENST00000599227 CWC27Q6UX04 472 aaKnown RBP13.64□□□□□ -0.23
ZNF544-213ENST00000599227 NDUFB9Q9Y6M9 179 aa13.64□□□□□ -0.23
ZNF544-213ENST00000599227 CPA1P15085 419 aa13.63□□□□□ -0.23
ZNF544-213ENST00000599227 LGR6Q9HBX8 967 aa13.63□□□□□ -0.23
ZNF544-213ENST00000599227 PALD1Q9ULE6 856 aa13.63□□□□□ -0.23
ZNF544-213ENST00000599227 PRR36Q9H6K5 1346 aa13.63□□□□□ -0.23
ZNF544-213ENST00000599227 PDE1AP54750 535 aa13.63□□□□□ -0.23
ZNF544-213ENST00000599227 RBSNQ9H1K0 784 aa13.63□□□□□ -0.23
ZNF544-213ENST00000599227 FAM13BQ9NYF5 915 aa13.63□□□□□ -0.23
ZNF544-213ENST00000599227 PA2G4Q9UQ80 394 aaKnown RBP13.63□□□□□ -0.23
ZNF544-213ENST00000599227 SPG7Q9UQ90 795 aa13.63□□□□□ -0.23
ZNF544-213ENST00000599227 FAM135BQ49AJ0 1406 aa13.63□□□□□ -0.23
ZNF544-213ENST00000599227 GNAI2P04899 355 aa13.63□□□□□ -0.23
ZNF544-213ENST00000599227 STK3Q13188 491 aa13.63□□□□□ -0.23
ZNF544-213ENST00000599227 NEUROD6Q96NK8 337 aa13.63□□□□□ -0.23
ZNF544-213ENST00000599227 KLHDC4Q8TBB5 520 aa13.62□□□□□ -0.23
ZNF544-213ENST00000599227 CD163L1Q9NR16 1453 aa13.62□□□□□ -0.23
ZNF544-213ENST00000599227 SETBP1Q9Y6X0 1596 aa13.62□□□□□ -0.23
ZNF544-213ENST00000599227 ATP5J2-PTCD1G3V325 749 aa13.62□□□□□ -0.23
ZNF544-213ENST00000599227 RIC3Q7Z5B4 369 aa13.62□□□□□ -0.23
ZNF544-213ENST00000599227 TMX3Q96JJ7 454 aa13.62□□□□□ -0.23
ZNF544-213ENST00000599227 CCDC8Q9H0W5 538 aaPredicted RBP13.62□□□□□ -0.23
ZNF544-213ENST00000599227 PI4KAP2A4QPH2 592 aa13.61□□□□□ -0.23
ZNF544-213ENST00000599227 MCCP23508 829 aa13.61□□□□□ -0.23
ZNF544-213ENST00000599227 KLHL40Q2TBA0 621 aa13.61□□□□□ -0.23
ZNF544-213ENST00000599227 UNC5CLQ8IV45 518 aa13.61□□□□□ -0.23
ZNF544-213ENST00000599227 PI4KAP1Q8N8J0 262 aa13.61□□□□□ -0.23
ZNF544-213ENST00000599227 LRRCC1Q9C099 1032 aa13.61□□□□□ -0.23
ZNF544-213ENST00000599227 FRMPD1Q5SYB0 1578 aa13.61□□□□□ -0.23
ZNF544-213ENST00000599227 NEXMIFQ5QGS0 1516 aa13.61□□□□□ -0.23
ZNF544-213ENST00000599227 PTPRMP28827 1452 aa13.61□□□□□ -0.23
ZNF544-213ENST00000599227 MLH3Q9UHC1 1453 aa13.61□□□□□ -0.23
ZNF544-213ENST00000599227 TSPOAP1O95153 1857 aa13.61□□□□□ -0.23
ZNF544-213ENST00000599227 PNPLA6Q8IY17 1366 aa13.61□□□□□ -0.23
ZNF544-213ENST00000599227 ARAP3Q8WWN8 1544 aa13.61□□□□□ -0.23
ZNF544-213ENST00000599227 PPLO60437 1756 aa13.61□□□□□ -0.23
ZNF544-213ENST00000599227 ZMYM3Q14202 1370 aa13.61□□□□□ -0.23
ZNF544-213ENST00000599227 COL3A1P02461 1466 aaPredicted RBP13.6□□□□□ -0.23
ZNF544-213ENST00000599227 VPS37CA5D8V6 355 aaPredicted RBP13.6□□□□□ -0.23
ZNF544-213ENST00000599227 CHL1O00533 1208 aa13.6□□□□□ -0.23
ZNF544-213ENST00000599227 DDIT3P35638 169 aa13.6□□□□□ -0.23
ZNF544-213ENST00000599227 FLIIQ13045 1269 aa13.6□□□□□ -0.23
ZNF544-213ENST00000599227 MX1P20591 662 aa13.6□□□□□ -0.23
ZNF544-213ENST00000599227 LMBRD1Q9NUN5 540 aa13.6□□□□□ -0.23
ZNF544-213ENST00000599227 PRAMEF22A3QJZ6 481 aa13.6□□□□□ -0.23
ZNF544-213ENST00000599227 BTBD11A6QL63 1104 aa13.6□□□□□ -0.23
ZNF544-213ENST00000599227 CEBPZQ03701 1054 aaKnown RBP13.6□□□□□ -0.23
ZNF544-213ENST00000599227 CWF19L2Q2TBE0 894 aaKnown RBP13.6□□□□□ -0.23
ZNF544-213ENST00000599227 DNAJC2Q99543 621 aaKnown RBP13.6□□□□□ -0.23
ZNF544-213ENST00000599227 RTL1A6NKG5 1358 aa13.59□□□□□ -0.23
ZNF544-213ENST00000599227 THEMISQ8N1K5 641 aaPredicted RBP13.59□□□□□ -0.23
ZNF544-213ENST00000599227 CCDC173Q0VFZ6 552 aa13.59□□□□□ -0.23
ZNF544-213ENST00000599227 FERMT3Q86UX7 667 aa13.59□□□□□ -0.23
ZNF544-213ENST00000599227 GPT2Q8TD30 523 aa13.59□□□□□ -0.23
ZNF544-213ENST00000599227 ZNF830Q96NB3 372 aaPredicted RBP13.59□□□□□ -0.23
ZNF544-213ENST00000599227 RAPGEF4Q8WZA2 1011 aa13.58□□□□□ -0.23
ZNF544-213ENST00000599227 TMEM63CQ9P1W3 806 aa13.58□□□□□ -0.23
ZNF544-213ENST00000599227 CHPF2Q9P2E5 772 aa13.58□□□□□ -0.23
ZNF544-213ENST00000599227 ZFYVE9O95405 1425 aa13.58□□□□□ -0.23
ZNF544-213ENST00000599227 ZC3H13Q5T200 1668 aaKnown RBP13.58□□□□□ -0.24
ZNF544-213ENST00000599227 HECW2Q9P2P5 1572 aa13.58□□□□□ -0.24
ZNF544-213ENST00000599227 GNAT3A8MTJ3 354 aa13.58□□□□□ -0.24
ZNF544-213ENST00000599227 FIBPO43427 364 aa13.58□□□□□ -0.24
ZNF544-213ENST00000599227 DIAPH3Q9NSV4 1193 aa13.58□□□□□ -0.24
ZNF544-213ENST00000599227 TULP1O00294 542 aaPredicted RBP13.57□□□□□ -0.24
ZNF544-213ENST00000599227 IFIT2P09913 472 aaKnown RBP13.57□□□□□ -0.24
ZNF544-213ENST00000599227 NCBP3Q53F19 620 aaKnown RBP13.57□□□□□ -0.24
ZNF544-213ENST00000599227 PPP4R3CPQ6ZMV5 832 aa13.57□□□□□ -0.24
ZNF544-213ENST00000599227 PHF8Q9UPP1 1060 aa13.57□□□□□ -0.24
ZNF544-213ENST00000599227 ARHGEF28Q8N1W1 1705 aaKnown RBP13.57□□□□□ -0.24
ZNF544-213ENST00000599227 HSP90B1P14625 803 aaKnown RBP13.57□□□□□ -0.24
ZNF544-213ENST00000599227 CCDC30Q5VVM6 783 aa13.57□□□□□ -0.24
ZNF544-213ENST00000599227 PTMSP20962 102 aa13.57□□□□□ -0.24
ZNF544-213ENST00000599227 GLIPR1L2Q4G1C9 344 aa13.57□□□□□ -0.24
ZNF544-213ENST00000599227 GORABQ5T7V8 394 aa13.57□□□□□ -0.24
ZNF544-213ENST00000599227 BOLA2Q9H3K6 86 aa13.57□□□□□ -0.24
ZNF544-213ENST00000599227 EVA1CP58658 441 aa13.56□□□□□ -0.24
ZNF544-213ENST00000599227 ZSCAN30Q86W11 494 aa13.56□□□□□ -0.24
ZNF544-213ENST00000599227 ZDHHC9Q9Y397 364 aa13.56□□□□□ -0.24
ZNF544-213ENST00000599227 SIGLEC1Q9BZZ2 1709 aa13.56□□□□□ -0.24
ZNF544-213ENST00000599227 LMTK2Q8IWU2 1503 aa13.56□□□□□ -0.24
ZNF544-213ENST00000599227 RAB11FIP4Q86YS3 637 aa13.56□□□□□ -0.24
ZNF544-213ENST00000599227 VIRMAQ69YN4 1812 aaKnown RBP13.56□□□□□ -0.24
ZNF544-213ENST00000599227 GADD45BO75293 160 aaPredicted RBP13.56□□□□□ -0.24
ZNF544-213ENST00000599227 CCT4P50991 539 aaKnown RBP13.56□□□□□ -0.24
ZNF544-213ENST00000599227 ESYT1Q9BSJ8 1104 aa13.56□□□□□ -0.24
ZNF544-213ENST00000599227 PIK3C2BO00750 1634 aa13.55□□□□□ -0.24
ZNF544-213ENST00000599227 MYO3AQ8NEV4 1616 aa13.55□□□□□ -0.24
ZNF544-213ENST00000599227 ADGRB2O60241 1585 aa13.55□□□□□ -0.24
ZNF544-213ENST00000599227 PTCH1Q13635 1447 aa13.55□□□□□ -0.24
ZNF544-213ENST00000599227 PPP1R42Q7Z4L9 355 aa13.55□□□□□ -0.24
ZNF544-213ENST00000599227 TTC5Q8N0Z6 440 aa13.55□□□□□ -0.24
ZNF544-213ENST00000599227 EDC4Q6P2E9 1401 aaKnown RBP13.55□□□□□ -0.24
ZNF544-213ENST00000599227 BRPF1P55201 1214 aaPredicted RBP13.55□□□□□ -0.24
ZNF544-213ENST00000599227 SRCIN1Q9C0H9 1055 aa13.55□□□□□ -0.24
ZNF544-213ENST00000599227 IL25Q9H293 177 aa13.55□□□□□ -0.24
ZNF544-213ENST00000599227 IFT172Q9UG01 1749 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms