RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 ITPK1Q13572 414 aa30.43■■■□□ 2.46
IRF3-220ENST00000598108 SPON1Q9HCB6 807 aa30.43■■■□□ 2.46
IRF3-220ENST00000598108 IL17REQ8NFR9 667 aa30.42■■■□□ 2.46
IRF3-220ENST00000598108 PNPLA7Q6ZV29 1317 aa30.42■■■□□ 2.46
IRF3-220ENST00000598108 GNAT3A8MTJ3 354 aa30.41■■■□□ 2.46
IRF3-220ENST00000598108 ATP6V1AP38606 617 aa30.41■■■□□ 2.46
IRF3-220ENST00000598108 LINC00116Q8NCU8 138 aa30.41■■■□□ 2.46
IRF3-220ENST00000598108 RBM42Q9BTD8 480 aaKnown RBP30.41■■■□□ 2.46
IRF3-220ENST00000598108 MAP3K5Q99683 1374 aa30.41■■■□□ 2.46
IRF3-220ENST00000598108 ATF5Q9Y2D1 282 aaPredicted RBP30.4■■■□□ 2.46
IRF3-220ENST00000598108 LRP5O75197 1615 aa30.39■■■□□ 2.46
IRF3-220ENST00000598108 CASZ1Q86V15 1759 aa30.38■■■□□ 2.45
IRF3-220ENST00000598108 PTCD1O75127 700 aaKnown RBP30.38■■■□□ 2.45
IRF3-220ENST00000598108 AMIGO3Q86WK7 504 aa30.37■■■□□ 2.45
IRF3-220ENST00000598108 PLEKHF1Q96S99 279 aa30.37■■■□□ 2.45
IRF3-220ENST00000598108 SLC39A6Q13433 755 aa30.36■■■□□ 2.45
IRF3-220ENST00000598108 HMGB2P26583 209 aaKnown RBP30.35■■■□□ 2.45
IRF3-220ENST00000598108 PTGER2P43116 358 aa30.35■■■□□ 2.45
IRF3-220ENST00000598108 SMIM5Q71RC9 77 aa30.35■■■□□ 2.45
IRF3-220ENST00000598108 COL23A1Q86Y22 540 aaPredicted RBP30.35■■■□□ 2.45
IRF3-220ENST00000598108 MTFR1LQ9H019 292 aa30.35■■■□□ 2.45
IRF3-220ENST00000598108 SCN11AQ9UI33 1791 aa30.33■■■□□ 2.45
IRF3-220ENST00000598108 MRC1P22897 1456 aa30.33■■■□□ 2.45
IRF3-220ENST00000598108 AK7Q96M32 723 aa30.33■■■□□ 2.45
IRF3-220ENST00000598108 ADAMTS7Q9UKP4 1686 aa30.31■■■□□ 2.44
IRF3-220ENST00000598108 CEMIPQ8WUJ3 1361 aa30.3■■■□□ 2.44
IRF3-220ENST00000598108 SGIP1Q9BQI5 828 aa30.3■■■□□ 2.44
IRF3-220ENST00000598108 C5P01031 1676 aa30.3■■■□□ 2.44
IRF3-220ENST00000598108 MSH5O43196 834 aa30.29■■■□□ 2.44
IRF3-220ENST00000598108 TEFQ10587 303 aa30.29■■■□□ 2.44
IRF3-220ENST00000598108 MCM10Q7L590 875 aa30.29■■■□□ 2.44
IRF3-220ENST00000598108 SLC16A10Q8TF71 515 aa30.29■■■□□ 2.44
IRF3-220ENST00000598108 DCTN1Q14203 1278 aa30.28■■■□□ 2.44
IRF3-220ENST00000598108 C4BP0C0L5 1744 aa30.27■■■□□ 2.44
IRF3-220ENST00000598108 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.26■■■□□ 2.43
IRF3-220ENST00000598108 GNPATO15228 680 aa30.26■■■□□ 2.43
IRF3-220ENST00000598108 PHF14O94880 888 aa30.26■■■□□ 2.43
IRF3-220ENST00000598108 RTF1Q92541 710 aaKnown RBP30.26■■■□□ 2.43
IRF3-220ENST00000598108 PPP1R1BQ9UD71 204 aaPredicted RBP30.26■■■□□ 2.43
IRF3-220ENST00000598108 TAF1LQ8IZX4 1826 aa30.26■■■□□ 2.43
IRF3-220ENST00000598108 NEFMP07197 916 aa30.25■■■□□ 2.43
IRF3-220ENST00000598108 FLAD1Q8NFF5 587 aa30.25■■■□□ 2.43
IRF3-220ENST00000598108 PNNQ9H307 717 aaKnown RBP30.25■■■□□ 2.43
IRF3-220ENST00000598108 HTATSF1O43719 755 aaKnown RBP30.24■■■□□ 2.43
IRF3-220ENST00000598108 NFE2L2Q16236 605 aa30.24■■■□□ 2.43
IRF3-220ENST00000598108 RC3H1Q5TC82 1133 aaKnown RBP30.24■■■□□ 2.43
IRF3-220ENST00000598108 TUBGCP6Q96RT7 1819 aa30.24■■■□□ 2.43
IRF3-220ENST00000598108 DNAJC10Q8IXB1 793 aa30.23■■■□□ 2.43
IRF3-220ENST00000598108 SSFA2P28290 1259 aa30.22■■■□□ 2.43
IRF3-220ENST00000598108 CNTNAP4Q9C0A0 1308 aa30.22■■■□□ 2.43
IRF3-220ENST00000598108 KCNQ3O43525 872 aa30.21■■■□□ 2.43
IRF3-220ENST00000598108 ZNF790Q6PG37 636 aa30.21■■■□□ 2.43
IRF3-220ENST00000598108 ADAMTS8Q9UP79 889 aa30.21■■■□□ 2.43
IRF3-220ENST00000598108 QSER1Q2KHR3 1735 aa30.21■■■□□ 2.43
IRF3-220ENST00000598108 MAPK8IP3Q9UPT6 1336 aa30.21■■■□□ 2.43
IRF3-220ENST00000598108 CRKLP46109 303 aaKnown RBP30.2■■■□□ 2.43
IRF3-220ENST00000598108 WDR43Q15061 677 aaKnown RBP eCLIP30.2■■■□□ 2.43
IRF3-220ENST00000598108 MSL1Q68DK7 614 aa30.2■■■□□ 2.43
IRF3-220ENST00000598108 KCPQ6ZWJ8 1503 aa30.2■■■□□ 2.42
IRF3-220ENST00000598108 BTBD11A6QL63 1104 aa30.19■■■□□ 2.42
IRF3-220ENST00000598108 CCDC184Q52MB2 194 aa30.19■■■□□ 2.42
IRF3-220ENST00000598108 CCDC146Q8IYE0 955 aa30.19■■■□□ 2.42
IRF3-220ENST00000598108 TTC5Q8N0Z6 440 aa30.19■■■□□ 2.42
IRF3-220ENST00000598108 ZNF496Q96IT1 587 aaPredicted RBP30.19■■■□□ 2.42
IRF3-220ENST00000598108 ZNF831Q5JPB2 1677 aa30.18■■■□□ 2.42
IRF3-220ENST00000598108 RPS6KA4O75676 772 aa30.18■■■□□ 2.42
IRF3-220ENST00000598108 INTS5Q6P9B9 1019 aaKnown RBP30.18■■■□□ 2.42
IRF3-220ENST00000598108 RTCBQ9Y3I0 505 aaKnown RBP30.18■■■□□ 2.42
IRF3-220ENST00000598108 VSIG10Q8N0Z9 540 aa30.17■■■□□ 2.42
IRF3-220ENST00000598108 ARXQ96QS3 562 aa30.17■■■□□ 2.42
IRF3-220ENST00000598108 CYP19A1P11511 503 aaPredicted RBP30.16■■■□□ 2.42
IRF3-220ENST00000598108 THUMPD2Q9BTF0 503 aaKnown RBP30.16■■■□□ 2.42
IRF3-220ENST00000598108 TRAPPC3LQ5T215 181 aa30.15■■■□□ 2.42
IRF3-220ENST00000598108 POLD1P28340 1107 aa30.14■■■□□ 2.42
IRF3-220ENST00000598108 TMPOP42166 694 aaKnown RBP30.14■■■□□ 2.42
IRF3-220ENST00000598108 ARHGEF1Q92888 912 aaKnown RBP30.14■■■□□ 2.42
IRF3-220ENST00000598108 VIRMAQ69YN4 1812 aaKnown RBP30.14■■■□□ 2.42
IRF3-220ENST00000598108 UBR3Q6ZT12 1888 aa30.13■■■□□ 2.41
IRF3-220ENST00000598108 RIPK4P57078 832 aa30.13■■■□□ 2.41
IRF3-220ENST00000598108 TAF7Q15545 349 aaPredicted RBP30.13■■■□□ 2.41
IRF3-220ENST00000598108 MIS18AQ9NYP9 233 aa30.13■■■□□ 2.41
IRF3-220ENST00000598108 ANP32CO43423 234 aa30.12■■■□□ 2.41
IRF3-220ENST00000598108 RUNDC1Q96C34 613 aa30.12■■■□□ 2.41
IRF3-220ENST00000598108 FHDC1Q9C0D6 1143 aaPredicted RBP30.12■■■□□ 2.41
IRF3-220ENST00000598108 CCDC87Q9NVE4 849 aa30.12■■■□□ 2.41
IRF3-220ENST00000598108 RRP7AQ9Y3A4 280 aaKnown RBP30.12■■■□□ 2.41
IRF3-220ENST00000598108 FMNL2Q96PY5 1086 aa30.11■■■□□ 2.41
IRF3-220ENST00000598108 HEG1Q9ULI3 1381 aa30.11■■■□□ 2.41
IRF3-220ENST00000598108 TJP1Q07157 1748 aa30.1■■■□□ 2.41
IRF3-220ENST00000598108 ADRA2BP18089 450 aa30.1■■■□□ 2.41
IRF3-220ENST00000598108 COL5A3P25940 1745 aaPredicted RBP30.1■■■□□ 2.41
IRF3-220ENST00000598108 SIPA1L3O60292 1781 aaPredicted RBP30.1■■■□□ 2.41
IRF3-220ENST00000598108 MYH14Q7Z406 1995 aaKnown RBP30.08■■■□□ 2.41
IRF3-220ENST00000598108 SYT17Q9BSW7 474 aa30.08■■■□□ 2.41
IRF3-220ENST00000598108 RFC4P35249 363 aa30.07■■■□□ 2.4
IRF3-220ENST00000598108 ZBTB1Q9Y2K1 713 aa30.07■■■□□ 2.4
IRF3-220ENST00000598108 NEUROD2Q15784 382 aa30.06■■■□□ 2.4
IRF3-220ENST00000598108 CICQ96RK0 1608 aaPredicted RBP30.06■■■□□ 2.4
IRF3-220ENST00000598108 SOS1Q07889 1333 aaPredicted RBP30.05■■■□□ 2.4
IRF3-220ENST00000598108 PRAMEF22A3QJZ6 481 aa30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms