RNA–Protein interactions for RNA: ENST00000597777.1

FARP1-222, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

Gene FARP1, Length 3,841 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-222	ENST00000597777	RWDD1	Q9H446	243 aa	Predicted RBP	12.27	□□□□□ -0.45
FARP1-222	ENST00000597777	CRB1	P82279	1406 aa		12.27	□□□□□ -0.45
FARP1-222	ENST00000597777	GNAT3	A8MTJ3	354 aa		12.27	□□□□□ -0.45
FARP1-222	ENST00000597777	CENPQ	Q7L2Z9	268 aa	Predicted RBP	12.27	□□□□□ -0.45
FARP1-222	ENST00000597777	VIRMA	Q69YN4	1812 aa	Known RBP	12.27	□□□□□ -0.45
FARP1-222	ENST00000597777	JCAD	Q9P266	1359 aa		12.26	□□□□□ -0.45
FARP1-222	ENST00000597777	RTF1	Q92541	710 aa	Known RBP	12.26	□□□□□ -0.45
FARP1-222	ENST00000597777	BABAM1	Q9NWV8	329 aa		12.26	□□□□□ -0.45
FARP1-222	ENST00000597777	WNK3	Q9BYP7	1800 aa		12.26	□□□□□ -0.45
FARP1-222	ENST00000597777	EIF2S2	P20042	333 aa	Known RBP	12.26	□□□□□ -0.45
FARP1-222	ENST00000597777	FAM83G	A6ND36	823 aa		12.25	□□□□□ -0.45
FARP1-222	ENST00000597777	CSB-PGBD3	P0DP91	1061 aa		12.25	□□□□□ -0.45
FARP1-222	ENST00000597777	NFKBIB	Q15653	356 aa		12.25	□□□□□ -0.45
FARP1-222	ENST00000597777	NLRP2	Q9NX02	1062 aa		12.25	□□□□□ -0.45
FARP1-222	ENST00000597777	CEMIP	Q8WUJ3	1361 aa		12.25	□□□□□ -0.45
FARP1-222	ENST00000597777	MEGF6	O75095	1541 aa		12.25	□□□□□ -0.45
FARP1-222	ENST00000597777	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.25	□□□□□ -0.45
FARP1-222	ENST00000597777	AKAP4	Q5JQC9	854 aa		12.25	□□□□□ -0.45
FARP1-222	ENST00000597777	NAP1L5	Q96NT1	182 aa	Predicted RBP	12.25	□□□□□ -0.45
FARP1-222	ENST00000597777	CARD10	Q9BWT7	1032 aa		12.25	□□□□□ -0.45
FARP1-222	ENST00000597777	BACH2	Q9BYV9	841 aa		12.25	□□□□□ -0.45
FARP1-222	ENST00000597777	RAPGEF4	Q8WZA2	1011 aa		12.25	□□□□□ -0.45
FARP1-222	ENST00000597777	NAP1L2	Q9ULW6	460 aa	Predicted RBP	12.24	□□□□□ -0.45
FARP1-222	ENST00000597777	SIPA1L3	O60292	1781 aa	Predicted RBP	12.24	□□□□□ -0.45
FARP1-222	ENST00000597777	TAT	P17735	454 aa	Predicted RBP	12.24	□□□□□ -0.45
FARP1-222	ENST00000597777	ZKSCAN2	Q63HK3	967 aa		12.24	□□□□□ -0.45
FARP1-222	ENST00000597777	HSCB	Q8IWL3	235 aa		12.24	□□□□□ -0.45
FARP1-222	ENST00000597777	DZIP1L	Q8IYY4	767 aa	Known RBP	12.23	□□□□□ -0.45
FARP1-222	ENST00000597777	SCN11A	Q9UI33	1791 aa		12.23	□□□□□ -0.45
FARP1-222	ENST00000597777	PDZRN3	Q9UPQ7	1066 aa		12.23	□□□□□ -0.45
FARP1-222	ENST00000597777	SPG7	Q9UQ90	795 aa		12.23	□□□□□ -0.45
FARP1-222	ENST00000597777	KDM3B	Q7LBC6	1761 aa		12.23	□□□□□ -0.45
FARP1-222	ENST00000597777	SPATA31A6	Q5VVP1	1343 aa		12.23	□□□□□ -0.45
FARP1-222	ENST00000597777	TRIM6-TRIM34	B2RNG4	842 aa		12.23	□□□□□ -0.45
FARP1-222	ENST00000597777	CHL1	O00533	1208 aa		12.23	□□□□□ -0.45
FARP1-222	ENST00000597777	IGHD	P01880	384 aa		12.23	□□□□□ -0.45
FARP1-222	ENST00000597777	USP35	Q9P2H5	1018 aa		12.23	□□□□□ -0.45
FARP1-222	ENST00000597777	SHANK3	Q9BYB0	1731 aa		12.22	□□□□□ -0.45
FARP1-222	ENST00000597777	SLIT2	O94813	1529 aa		12.22	□□□□□ -0.45
FARP1-222	ENST00000597777	ZNF530	Q6P9A1	599 aa	Predicted RBP	12.22	□□□□□ -0.45
FARP1-222	ENST00000597777	TOM1L2	Q6ZVM7	507 aa		12.22	□□□□□ -0.45
FARP1-222	ENST00000597777	MCM10	Q7L590	875 aa		12.22	□□□□□ -0.45
FARP1-222	ENST00000597777	MBIP	Q9NS73	344 aa		12.22	□□□□□ -0.45
FARP1-222	ENST00000597777	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	12.22	□□□□□ -0.45
FARP1-222	ENST00000597777	MRC1	P22897	1456 aa		12.21	□□□□□ -0.45
FARP1-222	ENST00000597777	C1orf141	Q5JVX7	400 aa		12.21	□□□□□ -0.45
FARP1-222	ENST00000597777	NOB1	Q9ULX3	412 aa	Known RBP	12.21	□□□□□ -0.45
FARP1-222	ENST00000597777	EVA1C	P58658	441 aa		12.21	□□□□□ -0.45
FARP1-222	ENST00000597777	SOS1	Q07889	1333 aa	Predicted RBP	12.21	□□□□□ -0.46
FARP1-222	ENST00000597777	VSIG10	Q8N0Z9	540 aa		12.21	□□□□□ -0.46
FARP1-222	ENST00000597777	ANP32B	Q92688	251 aa	Known RBP	12.21	□□□□□ -0.46
FARP1-222	ENST00000597777	BTG4	Q9NY30	223 aa		12.21	□□□□□ -0.46
FARP1-222	ENST00000597777	DISP2	A7MBM2	1401 aa		12.2	□□□□□ -0.46
FARP1-222	ENST00000597777	RARS	P54136	660 aa	Known RBP	12.2	□□□□□ -0.46
FARP1-222	ENST00000597777	ALDH1L2	Q3SY69	923 aa		12.2	□□□□□ -0.46
FARP1-222	ENST00000597777	IL17RE	Q8NFR9	667 aa		12.2	□□□□□ -0.46
FARP1-222	ENST00000597777	RILPL2	Q969X0	211 aa		12.2	□□□□□ -0.46
FARP1-222	ENST00000597777	TRIM44	Q96DX7	344 aa	Predicted RBP	12.2	□□□□□ -0.46
FARP1-222	ENST00000597777	MPND	Q8N594	471 aa		12.19	□□□□□ -0.46
FARP1-222	ENST00000597777	MS4A1	P11836	297 aa		12.19	□□□□□ -0.46
FARP1-222	ENST00000597777	BRPF1	P55201	1214 aa	Predicted RBP	12.19	□□□□□ -0.46
FARP1-222	ENST00000597777	LARP1	Q6PKG0	1096 aa	Known RBP	12.19	□□□□□ -0.46
FARP1-222	ENST00000597777	IL2RB	P14784	551 aa		12.19	□□□□□ -0.46
FARP1-222	ENST00000597777	IPO8	O15397	1037 aa	Known RBP	12.18	□□□□□ -0.46
FARP1-222	ENST00000597777	DTNB	O60941	627 aa		12.18	□□□□□ -0.46
FARP1-222	ENST00000597777	KCNJ4	P48050	445 aa		12.18	□□□□□ -0.46
FARP1-222	ENST00000597777	TAF7	Q15545	349 aa	Predicted RBP	12.18	□□□□□ -0.46
FARP1-222	ENST00000597777	PCDH11X	Q9BZA7	1347 aa		12.18	□□□□□ -0.46
FARP1-222	ENST00000597777	PCDH11Y	Q9BZA8	1340 aa		12.18	□□□□□ -0.46
FARP1-222	ENST00000597777	IFNL2	Q8IZJ0	200 aa		12.18	□□□□□ -0.46
FARP1-222	ENST00000597777	PHKG2	P15735	406 aa		12.18	□□□□□ -0.46
FARP1-222	ENST00000597777	THRAP3	Q9Y2W1	955 aa	Known RBP	12.18	□□□□□ -0.46
FARP1-222	ENST00000597777	RNMT	O43148	476 aa	Known RBP	12.17	□□□□□ -0.46
FARP1-222	ENST00000597777	CDCA7	Q9BWT1	371 aa	Predicted RBP	12.17	□□□□□ -0.46
FARP1-222	ENST00000597777	STRN4	Q9NRL3	753 aa		12.17	□□□□□ -0.46
FARP1-222	ENST00000597777	LRP6	O75581	1613 aa		12.17	□□□□□ -0.46
FARP1-222	ENST00000597777	SEC24B	O95487	1268 aa		12.17	□□□□□ -0.46
FARP1-222	ENST00000597777	RLBP1	P12271	317 aa		12.17	□□□□□ -0.46
FARP1-222	ENST00000597777	BCL11B	Q9C0K0	894 aa	Predicted RBP	12.17	□□□□□ -0.46
FARP1-222	ENST00000597777	KDM6A	O15550	1401 aa	Predicted RBP	12.17	□□□□□ -0.46
FARP1-222	ENST00000597777	TSPYL4	Q9UJ04	414 aa		12.16	□□□□□ -0.46
FARP1-222	ENST00000597777	GSE1	Q14687	1217 aa		12.16	□□□□□ -0.46
FARP1-222	ENST00000597777	VAMP4	O75379	141 aa		12.16	□□□□□ -0.46
FARP1-222	ENST00000597777	KRT24	Q2M2I5	525 aa		12.16	□□□□□ -0.46
FARP1-222	ENST00000597777	ZCRB1	Q8TBF4	217 aa	Known RBP	12.16	□□□□□ -0.46
FARP1-222	ENST00000597777	DCAF5	Q96JK2	942 aa		12.16	□□□□□ -0.46
FARP1-222	ENST00000597777	PDE3A	Q14432	1141 aa		12.15	□□□□□ -0.46
FARP1-222	ENST00000597777	KIF16B	Q96L93	1317 aa		12.15	□□□□□ -0.46
FARP1-222	ENST00000597777	NKX1-1	Q15270	411 aa	Predicted RBP	12.15	□□□□□ -0.46
FARP1-222	ENST00000597777	TWISTNB	Q3B726	338 aa	Predicted RBP	12.15	□□□□□ -0.46
FARP1-222	ENST00000597777	SSH1	Q8WYL5	1049 aa		12.15	□□□□□ -0.46
FARP1-222	ENST00000597777	CHMP3	Q9Y3E7	222 aa		12.15	□□□□□ -0.46
FARP1-222	ENST00000597777	PAPPA	Q13219	1627 aa		12.15	□□□□□ -0.47
FARP1-222	ENST00000597777	ADAMTS2	O95450	1211 aa		12.14	□□□□□ -0.47
FARP1-222	ENST00000597777	TEF	Q10587	303 aa		12.14	□□□□□ -0.47
FARP1-222	ENST00000597777	TSHZ3	Q63HK5	1081 aa		12.14	□□□□□ -0.47
FARP1-222	ENST00000597777	SPATA31A1	Q5TZJ5	1347 aa		12.14	□□□□□ -0.47
FARP1-222	ENST00000597777	TMEM57	Q8N5G2	664 aa		12.14	□□□□□ -0.47
FARP1-222	ENST00000597777	LGR6	Q9HBX8	967 aa		12.14	□□□□□ -0.47
FARP1-222	ENST00000597777	TNS2	Q63HR2	1409 aa		12.14	□□□□□ -0.47

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