RNA–Protein interactions for RNA: ENST00000597347.5

SOX2-OT-226, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 1,342 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-226ENST00000597347 ATG3Q9NT62 314 aa13.09□□□□□ -0.31
SOX2-OT-226ENST00000597347 PAPPAQ13219 1627 aa13.08□□□□□ -0.31
SOX2-OT-226ENST00000597347 PALLDQ8WX93 1383 aa13.08□□□□□ -0.32
SOX2-OT-226ENST00000597347 LY75O60449 1722 aa13.08□□□□□ -0.32
SOX2-OT-226ENST00000597347 SGIP1Q9BQI5 828 aa13.08□□□□□ -0.32
SOX2-OT-226ENST00000597347 SRCAPQ6ZRS2 3230 aa13.07□□□□□ -0.32
SOX2-OT-226ENST00000597347 LOC102724428A0A0B4J2F2 783 aa13.07□□□□□ -0.32
SOX2-OT-226ENST00000597347 SIK1P57059 783 aa13.07□□□□□ -0.32
SOX2-OT-226ENST00000597347 RC3H1Q5TC82 1133 aaKnown RBP13.07□□□□□ -0.32
SOX2-OT-226ENST00000597347 GAS2L2Q8NHY3 880 aa13.07□□□□□ -0.32
SOX2-OT-226ENST00000597347 KAT6BQ8WYB5 2073 aa13.07□□□□□ -0.32
SOX2-OT-226ENST00000597347 HTATSF1O43719 755 aaKnown RBP13.06□□□□□ -0.32
SOX2-OT-226ENST00000597347 CABP4P57796 275 aa13.06□□□□□ -0.32
SOX2-OT-226ENST00000597347 ZNF827Q17R98 1081 aa13.06□□□□□ -0.32
SOX2-OT-226ENST00000597347 MTHFSDQ2M296 383 aaKnown RBP13.06□□□□□ -0.32
SOX2-OT-226ENST00000597347 ASAP1Q9ULH1 1129 aa13.06□□□□□ -0.32
SOX2-OT-226ENST00000597347 KDM6AO15550 1401 aaPredicted RBP13.05□□□□□ -0.32
SOX2-OT-226ENST00000597347 DOT1LQ8TEK3 1739 aa13.05□□□□□ -0.32
SOX2-OT-226ENST00000597347 HMOX1P09601 288 aa13.05□□□□□ -0.32
SOX2-OT-226ENST00000597347 PTGER2P43116 358 aa13.05□□□□□ -0.32
SOX2-OT-226ENST00000597347 NFATC2IPQ8NCF5 419 aa13.05□□□□□ -0.32
SOX2-OT-226ENST00000597347 RSPH6AQ9H0K4 717 aa13.05□□□□□ -0.32
SOX2-OT-226ENST00000597347 PNNQ9H307 717 aaKnown RBP13.05□□□□□ -0.32
SOX2-OT-226ENST00000597347 SLC52A2Q9HAB3 445 aa13.05□□□□□ -0.32
SOX2-OT-226ENST00000597347 TFCP2L1Q9NZI6 479 aa13.05□□□□□ -0.32
SOX2-OT-226ENST00000597347 RNMTO43148 476 aaKnown RBP13.04□□□□□ -0.32
SOX2-OT-226ENST00000597347 ZNF831Q5JPB2 1677 aa13.04□□□□□ -0.32
SOX2-OT-226ENST00000597347 PNPLA7Q6ZV29 1317 aa13.04□□□□□ -0.32
SOX2-OT-226ENST00000597347 CASZ1Q86V15 1759 aa13.03□□□□□ -0.32
SOX2-OT-226ENST00000597347 SSFA2P28290 1259 aa13.03□□□□□ -0.32
SOX2-OT-226ENST00000597347 DDX10Q13206 875 aaKnown RBP13.03□□□□□ -0.32
SOX2-OT-226ENST00000597347 VSIG10Q8N0Z9 540 aa13.03□□□□□ -0.32
SOX2-OT-226ENST00000597347 PDGFDQ9GZP0 370 aaPredicted RBP13.03□□□□□ -0.32
SOX2-OT-226ENST00000597347 QSER1Q2KHR3 1735 aa13.02□□□□□ -0.32
SOX2-OT-226ENST00000597347 GNAT3A8MTJ3 354 aa13.02□□□□□ -0.33
SOX2-OT-226ENST00000597347 U2SURPO15042 1029 aaKnown RBP13.02□□□□□ -0.33
SOX2-OT-226ENST00000597347 LGR6Q9HBX8 967 aa13.02□□□□□ -0.33
SOX2-OT-226ENST00000597347 MAP3K5Q99683 1374 aa13.02□□□□□ -0.33
SOX2-OT-226ENST00000597347 TOGARAM1Q9Y4F4 1720 aa13.02□□□□□ -0.33
SOX2-OT-226ENST00000597347 ATP6V1AP38606 617 aa13.01□□□□□ -0.33
SOX2-OT-226ENST00000597347 IL17REQ8NFR9 667 aa13.01□□□□□ -0.33
SOX2-OT-226ENST00000597347 CEMIPQ8WUJ3 1361 aa13.01□□□□□ -0.33
SOX2-OT-226ENST00000597347 ADAMTS7Q9UKP4 1686 aa13.01□□□□□ -0.33
SOX2-OT-226ENST00000597347 ITGB4P16144 1822 aa13.01□□□□□ -0.33
SOX2-OT-226ENST00000597347 MRC1P22897 1456 aa13□□□□□ -0.33
SOX2-OT-226ENST00000597347 CNTNAP4Q9C0A0 1308 aa13□□□□□ -0.33
SOX2-OT-226ENST00000597347 U2AF1L5P0DN76 240 aaPredicted RBP13□□□□□ -0.33
SOX2-OT-226ENST00000597347 U2AF1Q01081 240 aaKnown RBP eCLIP13□□□□□ -0.33
SOX2-OT-226ENST00000597347 ITPK1Q13572 414 aa13□□□□□ -0.33
SOX2-OT-226ENST00000597347 COL23A1Q86Y22 540 aaPredicted RBP13□□□□□ -0.33
SOX2-OT-226ENST00000597347 PHACTR3Q96KR7 559 aa13□□□□□ -0.33
SOX2-OT-226ENST00000597347 SLC4A9Q96Q91 983 aa13□□□□□ -0.33
SOX2-OT-226ENST00000597347 PRKAR2BP31323 418 aa12.99□□□□□ -0.33
SOX2-OT-226ENST00000597347 KCNQ4P56696 695 aa12.99□□□□□ -0.33
SOX2-OT-226ENST00000597347 PLEKHF1Q96S99 279 aa12.99□□□□□ -0.33
SOX2-OT-226ENST00000597347 MYBBP1AQ9BQG0 1328 aaKnown RBP12.98□□□□□ -0.33
SOX2-OT-226ENST00000597347 RPS6KA4O75676 772 aa12.98□□□□□ -0.33
SOX2-OT-226ENST00000597347 ZBTB7AO95365 584 aa12.98□□□□□ -0.33
SOX2-OT-226ENST00000597347 LINC00116Q8NCU8 138 aa12.98□□□□□ -0.33
SOX2-OT-226ENST00000597347 TEX13AQ9BXU3 409 aaPredicted RBP12.98□□□□□ -0.33
SOX2-OT-226ENST00000597347 COL24A1Q17RW2 1714 aa12.98□□□□□ -0.33
SOX2-OT-226ENST00000597347 AK7Q96M32 723 aa12.97□□□□□ -0.33
SOX2-OT-226ENST00000597347 ARXQ96QS3 562 aa12.97□□□□□ -0.33
SOX2-OT-226ENST00000597347 PRKRIP1Q9H875 184 aaPredicted RBP12.97□□□□□ -0.33
SOX2-OT-226ENST00000597347 POLD1P28340 1107 aa12.96□□□□□ -0.33
SOX2-OT-226ENST00000597347 RTCBQ9Y3I0 505 aaKnown RBP12.96□□□□□ -0.33
SOX2-OT-226ENST00000597347 CICQ96RK0 1608 aaPredicted RBP12.96□□□□□ -0.34
SOX2-OT-226ENST00000597347 SCN11AQ9UI33 1791 aa12.95□□□□□ -0.34
SOX2-OT-226ENST00000597347 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.95□□□□□ -0.34
SOX2-OT-226ENST00000597347 NEFMP07197 916 aa12.95□□□□□ -0.34
SOX2-OT-226ENST00000597347 TEFQ10587 303 aa12.95□□□□□ -0.34
SOX2-OT-226ENST00000597347 TRAPPC3LQ5T215 181 aa12.95□□□□□ -0.34
SOX2-OT-226ENST00000597347 ZNF790Q6PG37 636 aa12.95□□□□□ -0.34
SOX2-OT-226ENST00000597347 NLGN1Q8N2Q7 840 aa12.95□□□□□ -0.34
SOX2-OT-226ENST00000597347 SYT17Q9BSW7 474 aa12.95□□□□□ -0.34
SOX2-OT-226ENST00000597347 PPP1R1BQ9UD71 204 aaPredicted RBP12.95□□□□□ -0.34
SOX2-OT-226ENST00000597347 C4BP0C0L5 1744 aa12.94□□□□□ -0.34
SOX2-OT-226ENST00000597347 CNGB1Q14028 1251 aaPredicted RBP12.94□□□□□ -0.34
SOX2-OT-226ENST00000597347 BABAM1Q9NWV8 329 aa12.94□□□□□ -0.34
SOX2-OT-226ENST00000597347 TAF1LQ8IZX4 1826 aa12.94□□□□□ -0.34
SOX2-OT-226ENST00000597347 C5P01031 1676 aa12.94□□□□□ -0.34
SOX2-OT-226ENST00000597347 ZNF316A6NFI3 1004 aaPredicted RBP12.93□□□□□ -0.34
SOX2-OT-226ENST00000597347 PTCD1O75127 700 aaKnown RBP12.93□□□□□ -0.34
SOX2-OT-226ENST00000597347 CYP19A1P11511 503 aaPredicted RBP12.93□□□□□ -0.34
SOX2-OT-226ENST00000597347 INTS5Q6P9B9 1019 aaKnown RBP12.93□□□□□ -0.34
SOX2-OT-226ENST00000597347 RTF1Q92541 710 aaKnown RBP12.93□□□□□ -0.34
SOX2-OT-226ENST00000597347 CD2APQ9Y5K6 639 aa12.93□□□□□ -0.34
SOX2-OT-226ENST00000597347 TAF7Q15545 349 aaPredicted RBP12.92□□□□□ -0.34
SOX2-OT-226ENST00000597347 PNISRQ8TF01 805 aaKnown RBP12.92□□□□□ -0.34
SOX2-OT-226ENST00000597347 ARHGEF1Q92888 912 aaKnown RBP12.92□□□□□ -0.34
SOX2-OT-226ENST00000597347 RGL2O15211 777 aa12.91□□□□□ -0.34
SOX2-OT-226ENST00000597347 GNPATO15228 680 aa12.91□□□□□ -0.34
SOX2-OT-226ENST00000597347 STARD3NLO95772 234 aa12.91□□□□□ -0.34
SOX2-OT-226ENST00000597347 CRKLP46109 303 aaKnown RBP12.91□□□□□ -0.34
SOX2-OT-226ENST00000597347 NFE2L2Q16236 605 aa12.91□□□□□ -0.34
SOX2-OT-226ENST00000597347 AMIGO3Q86WK7 504 aa12.91□□□□□ -0.34
SOX2-OT-226ENST00000597347 FHDC1Q9C0D6 1143 aaPredicted RBP12.91□□□□□ -0.34
SOX2-OT-226ENST00000597347 TTC5Q8N0Z6 440 aa12.9□□□□□ -0.34
SOX2-OT-226ENST00000597347 FMNL2Q96PY5 1086 aa12.9□□□□□ -0.34
SOX2-OT-226ENST00000597347 CCDC87Q9NVE4 849 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms