RNA–Protein interactions for RNA: ENST00000596940.5

C19orf54-206, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 3

Gene C19orf54, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-206ENST00000596940 AEBP1Q8IUX7 1158 aa19.03■□□□□ 0.64
C19orf54-206ENST00000596940 ZNF784Q8NCA9 323 aaPredicted RBP19.03■□□□□ 0.64
C19orf54-206ENST00000596940 NLGN2Q8NFZ4 835 aa19.03■□□□□ 0.64
C19orf54-206ENST00000596940 RBM42Q9BTD8 480 aaKnown RBP19.03■□□□□ 0.64
C19orf54-206ENST00000596940 UTRNP46939 3433 aa19.02■□□□□ 0.64
C19orf54-206ENST00000596940 C5P01031 1676 aa19.02■□□□□ 0.64
C19orf54-206ENST00000596940 RTCBQ9Y3I0 505 aaKnown RBP19.02■□□□□ 0.64
C19orf54-206ENST00000596940 KDRP35968 1356 aa19.02■□□□□ 0.64
C19orf54-206ENST00000596940 TOGARAM1Q9Y4F4 1720 aa19.01■□□□□ 0.63
C19orf54-206ENST00000596940 PER1O15534 1290 aaPredicted RBP19.01■□□□□ 0.63
C19orf54-206ENST00000596940 TRAPPC3LQ5T215 181 aa19.01■□□□□ 0.63
C19orf54-206ENST00000596940 RC3H1Q5TC82 1133 aaKnown RBP19.01■□□□□ 0.63
C19orf54-206ENST00000596940 C4BP0C0L5 1744 aa19■□□□□ 0.63
C19orf54-206ENST00000596940 COL24A1Q17RW2 1714 aa19■□□□□ 0.63
C19orf54-206ENST00000596940 ADRA2BP18089 450 aa19■□□□□ 0.63
C19orf54-206ENST00000596940 AKAP4Q5JQC9 854 aa18.99■□□□□ 0.63
C19orf54-206ENST00000596940 CC2D1BQ5T0F9 858 aaKnown RBP18.99■□□□□ 0.63
C19orf54-206ENST00000596940 AMIGO3Q86WK7 504 aa18.99■□□□□ 0.63
C19orf54-206ENST00000596940 NLGN1Q8N2Q7 840 aa18.99■□□□□ 0.63
C19orf54-206ENST00000596940 NFATC2IPQ8NCF5 419 aa18.99■□□□□ 0.63
C19orf54-206ENST00000596940 ITGB4P16144 1822 aa18.99■□□□□ 0.63
C19orf54-206ENST00000596940 DIAPH1O60610 1272 aaKnown RBP18.98■□□□□ 0.63
C19orf54-206ENST00000596940 TUBGCP6Q96RT7 1819 aa18.97■□□□□ 0.63
C19orf54-206ENST00000596940 CNTNAP4Q9C0A0 1308 aa18.97■□□□□ 0.63
C19orf54-206ENST00000596940 NPC1L1Q9UHC9 1359 aa18.96■□□□□ 0.63
C19orf54-206ENST00000596940 PTCD1O75127 700 aaKnown RBP18.96■□□□□ 0.63
C19orf54-206ENST00000596940 RPS6KA4O75676 772 aa18.96■□□□□ 0.63
C19orf54-206ENST00000596940 SMIM5Q71RC9 77 aa18.96■□□□□ 0.63
C19orf54-206ENST00000596940 KDM6AO15550 1401 aaPredicted RBP18.96■□□□□ 0.63
C19orf54-206ENST00000596940 YBX3P16989 372 aaKnown RBP eCLIP18.95■□□□□ 0.624e-7■■□□□ 13.1
C19orf54-206ENST00000596940 RFC4P35249 363 aa18.95■□□□□ 0.62
C19orf54-206ENST00000596940 SLC4A9Q96Q91 983 aa18.95■□□□□ 0.62
C19orf54-206ENST00000596940 HMOX1P09601 288 aa18.94■□□□□ 0.62
C19orf54-206ENST00000596940 TAF1LQ8IZX4 1826 aa18.94■□□□□ 0.62
C19orf54-206ENST00000596940 MMP10P09238 476 aa18.93■□□□□ 0.62
C19orf54-206ENST00000596940 ARHGEF1Q92888 912 aaKnown RBP18.93■□□□□ 0.62
C19orf54-206ENST00000596940 SLC52A2Q9HAB3 445 aa18.93■□□□□ 0.62
C19orf54-206ENST00000596940 GOLGB1Q14789 3259 aaKnown RBP18.9■□□□□ 0.62
C19orf54-206ENST00000596940 RNMTO43148 476 aaKnown RBP18.9■□□□□ 0.62
C19orf54-206ENST00000596940 CRKLP46109 303 aaKnown RBP18.9■□□□□ 0.62
C19orf54-206ENST00000596940 UBR3Q6ZT12 1888 aa18.89■□□□□ 0.61
C19orf54-206ENST00000596940 U2SURPO15042 1029 aaKnown RBP18.89■□□□□ 0.61
C19orf54-206ENST00000596940 TGFB2P61812 414 aa18.89■□□□□ 0.61
C19orf54-206ENST00000596940 MTHFSDQ2M296 383 aaKnown RBP18.89■□□□□ 0.61
C19orf54-206ENST00000596940 CFAP53Q96M91 514 aa18.89■□□□□ 0.61
C19orf54-206ENST00000596940 LGR6Q9HBX8 967 aa18.89■□□□□ 0.61
C19orf54-206ENST00000596940 CHD4Q14839 1912 aa18.88■□□□□ 0.61
C19orf54-206ENST00000596940 GYS1P13807 737 aa18.88■□□□□ 0.61
C19orf54-206ENST00000596940 CNGB1Q14028 1251 aaPredicted RBP18.88■□□□□ 0.61
C19orf54-206ENST00000596940 CCDC87Q9NVE4 849 aa18.88■□□□□ 0.61
C19orf54-206ENST00000596940 PARP3Q9Y6F1 533 aa18.88■□□□□ 0.61
C19orf54-206ENST00000596940 ZNF831Q5JPB2 1677 aa18.87■□□□□ 0.61
C19orf54-206ENST00000596940 GAS2L2Q8NHY3 880 aa18.87■□□□□ 0.61
C19orf54-206ENST00000596940 GIGYF1O75420 1035 aaPredicted RBP18.86■□□□□ 0.61
C19orf54-206ENST00000596940 NUDCQ9Y266 331 aa18.86■□□□□ 0.61
C19orf54-206ENST00000596940 C1QTNF8P60827 252 aa18.85■□□□□ 0.61
C19orf54-206ENST00000596940 VSIG10Q8N0Z9 540 aa18.85■□□□□ 0.61
C19orf54-206ENST00000596940 ZPR1O75312 459 aa18.84■□□□□ 0.61
C19orf54-206ENST00000596940 TTC5Q8N0Z6 440 aa18.84■□□□□ 0.61
C19orf54-206ENST00000596940 GNAT3A8MTJ3 354 aa18.83■□□□□ 0.6
C19orf54-206ENST00000596940 TEFQ10587 303 aa18.83■□□□□ 0.6
C19orf54-206ENST00000596940 INTS5Q6P9B9 1019 aaKnown RBP18.83■□□□□ 0.6
C19orf54-206ENST00000596940 DNAJC10Q8IXB1 793 aa18.83■□□□□ 0.6
C19orf54-206ENST00000596940 USP42Q9H9J4 1324 aaKnown RBP18.82■□□□□ 0.6
C19orf54-206ENST00000596940 SLC39A6Q13433 755 aa18.82■□□□□ 0.6
C19orf54-206ENST00000596940 STARD3NLO95772 234 aa18.81■□□□□ 0.6
C19orf54-206ENST00000596940 CYP19A1P11511 503 aaPredicted RBP18.81■□□□□ 0.6
C19orf54-206ENST00000596940 A0A0G2JLW4 131 aa18.8■□□□□ 0.6
C19orf54-206ENST00000596940 TEX13AQ9BXU3 409 aaPredicted RBP18.8■□□□□ 0.6
C19orf54-206ENST00000596940 WWC3Q9ULE0 1092 aa18.8■□□□□ 0.6
C19orf54-206ENST00000596940 MRC1P22897 1456 aa18.79■□□□□ 0.6
C19orf54-206ENST00000596940 FKBP8Q14318 412 aa18.79■□□□□ 0.6
C19orf54-206ENST00000596940 GPBP1L1Q9HC44 474 aaPredicted RBP18.79■□□□□ 0.6
C19orf54-206ENST00000596940 SRP68Q9UHB9 627 aaKnown RBP18.79■□□□□ 0.6
C19orf54-206ENST00000596940 BCS1LQ9Y276 419 aa18.79■□□□□ 0.6
C19orf54-206ENST00000596940 C10orf71Q711Q0 1435 aa18.79■□□□□ 0.6
C19orf54-206ENST00000596940 SOS1Q07889 1333 aaPredicted RBP18.77■□□□□ 0.6
C19orf54-206ENST00000596940 ATP10DQ9P241 1426 aa18.77■□□□□ 0.6
C19orf54-206ENST00000596940 DPEP1P16444 411 aa18.77■□□□□ 0.6
C19orf54-206ENST00000596940 ZNF790Q6PG37 636 aa18.77■□□□□ 0.6
C19orf54-206ENST00000596940 IL17REQ8NFR9 667 aa18.77■□□□□ 0.6
C19orf54-206ENST00000596940 NARFQ9UHQ1 456 aa18.77■□□□□ 0.6
C19orf54-206ENST00000596940 COL5A3P25940 1745 aaPredicted RBP18.77■□□□□ 0.59
C19orf54-206ENST00000596940 PXDNLA1KZ92 1463 aa18.77■□□□□ 0.59
C19orf54-206ENST00000596940 COL3A1P02461 1466 aaPredicted RBP18.77■□□□□ 0.59
C19orf54-206ENST00000596940 CICQ96RK0 1608 aaPredicted RBP18.76■□□□□ 0.59
C19orf54-206ENST00000596940 A0A087WZG4 1122 aa18.76■□□□□ 0.59
C19orf54-206ENST00000596940 SENP3-EIF4A1A0A087X0R7 540 aa18.76■□□□□ 0.59
C19orf54-206ENST00000596940 FCHSD2O94868 740 aa18.76■□□□□ 0.59
C19orf54-206ENST00000596940 U2AF1L5P0DN76 240 aaPredicted RBP18.76■□□□□ 0.59
C19orf54-206ENST00000596940 PPP2R1AP30153 589 aa18.76■□□□□ 0.59
C19orf54-206ENST00000596940 TM4SF1P30408 202 aa18.76■□□□□ 0.59
C19orf54-206ENST00000596940 PRKAR2BP31323 418 aa18.76■□□□□ 0.59
C19orf54-206ENST00000596940 U2AF1Q01081 240 aaKnown RBP eCLIP18.76■□□□□ 0.59
C19orf54-206ENST00000596940 USPL1Q5W0Q7 1092 aa18.76■□□□□ 0.59
C19orf54-206ENST00000596940 NPM2Q86SE8 214 aaKnown RBP18.76■□□□□ 0.59
C19orf54-206ENST00000596940 PIM2Q9P1W9 311 aa18.76■□□□□ 0.59
C19orf54-206ENST00000596940 SCN11AQ9UI33 1791 aa18.76■□□□□ 0.59
C19orf54-206ENST00000596940 RTF1Q92541 710 aaKnown RBP18.75■□□□□ 0.59
C19orf54-206ENST00000596940 DDR1Q08345 913 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms