RNA–Protein interactions for RNA: ENST00000596778.1

AC003973.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC003973.2, Length 1,394 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003973.2-201ENST00000596778 PCDH11YQ9BZA8 1340 aa8.89□□□□□ -0.99
AC003973.2-201ENST00000596778 PDE3BQ13370 1112 aa8.88□□□□□ -0.99
AC003973.2-201ENST00000596778 MIER1Q8N108 512 aa8.88□□□□□ -0.99
AC003973.2-201ENST00000596778 ZCRB1Q8TBF4 217 aaKnown RBP8.88□□□□□ -0.99
AC003973.2-201ENST00000596778 PODXL2Q9NZ53 605 aa8.88□□□□□ -0.99
AC003973.2-201ENST00000596778 SPG7Q9UQ90 795 aa8.88□□□□□ -0.99
AC003973.2-201ENST00000596778 SULT6B1Q6IMI4 303 aa8.87□□□□□ -0.99
AC003973.2-201ENST00000596778 ILDR2Q71H61 639 aa8.87□□□□□ -0.99
AC003973.2-201ENST00000596778 RSPH6AQ9H0K4 717 aa8.87□□□□□ -0.99
AC003973.2-201ENST00000596778 ADAMTS7Q9UKP4 1686 aa8.87□□□□□ -0.99
AC003973.2-201ENST00000596778 HSP90AB1P08238 724 aaKnown RBP8.86□□□□□ -0.99
AC003973.2-201ENST00000596778 POTEJP0CG39 1038 aa8.86□□□□□ -0.99
AC003973.2-201ENST00000596778 PLEKHO1Q53GL0 409 aaPredicted RBP8.86□□□□□ -0.99
AC003973.2-201ENST00000596778 MAMSTRQ6ZN01 415 aa8.86□□□□□ -0.99
AC003973.2-201ENST00000596778 MARCH10Q8NA82 808 aaPredicted RBP8.86□□□□□ -0.99
AC003973.2-201ENST00000596778 RGPD3A6NKT7 1758 aaPredicted RBP8.86□□□□□ -0.99
AC003973.2-201ENST00000596778 RGPD4Q7Z3J3 1758 aa8.86□□□□□ -0.99
AC003973.2-201ENST00000596778 CCER2I3L3R5 266 aa8.86□□□□□ -0.99
AC003973.2-201ENST00000596778 IFNL2Q8IZJ0 200 aa8.86□□□□□ -0.99
AC003973.2-201ENST00000596778 USHBP1Q8N6Y0 703 aa8.86□□□□□ -0.99
AC003973.2-201ENST00000596778 NHSQ6T4R5 1651 aa8.85□□□□□ -0.99
AC003973.2-201ENST00000596778 SPDYE2BA6NHP3 402 aa8.85□□□□□ -0.99
AC003973.2-201ENST00000596778 CYP27B1O15528 508 aa8.85□□□□□ -0.99
AC003973.2-201ENST00000596778 SPDYE6P0CI01 402 aa8.85□□□□□ -0.99
AC003973.2-201ENST00000596778 U2AF1L5P0DN76 240 aaPredicted RBP8.85□□□□□ -0.99
AC003973.2-201ENST00000596778 U2AF1Q01081 240 aaKnown RBP eCLIP8.85□□□□□ -0.99
AC003973.2-201ENST00000596778 SPDYE2Q495Y8 402 aa8.85□□□□□ -0.99
AC003973.2-201ENST00000596778 AEBP1Q8IUX7 1158 aa8.85□□□□□ -0.99
AC003973.2-201ENST00000596778 SPNS2Q8IVW8 549 aa8.85□□□□□ -0.99
AC003973.2-201ENST00000596778 GAS2L2Q8NHY3 880 aa8.85□□□□□ -0.99
AC003973.2-201ENST00000596778 PLEKHF1Q96S99 279 aa8.85□□□□□ -0.99
AC003973.2-201ENST00000596778 EP400Q96L91 3159 aa8.84□□□□□ -0.99
AC003973.2-201ENST00000596778 SBF2Q86WG5 1849 aa8.84□□□□□ -0.99
AC003973.2-201ENST00000596778 A0A0G2JS52 829 aa8.84□□□□□ -0.99
AC003973.2-201ENST00000596778 SOCS7O14512 581 aa8.84□□□□□ -0.99
AC003973.2-201ENST00000596778 U2SURPO15042 1029 aaKnown RBP8.84□□□□□ -0.99
AC003973.2-201ENST00000596778 GALR2O43603 387 aaPredicted RBP8.84□□□□□ -0.99
AC003973.2-201ENST00000596778 HTATSF1O43719 755 aaKnown RBP8.84□□□□□ -0.99
AC003973.2-201ENST00000596778 PHKG2P15735 406 aa8.84□□□□□ -0.99
AC003973.2-201ENST00000596778 HMGB2P26583 209 aaKnown RBP8.84□□□□□ -0.99
AC003973.2-201ENST00000596778 MYT1Q01538 1121 aa8.84□□□□□ -0.99
AC003973.2-201ENST00000596778 AKAP4Q5JQC9 854 aa8.84□□□□□ -0.99
AC003973.2-201ENST00000596778 ZNF579Q8NAF0 562 aaKnown RBP8.84□□□□□ -0.99
AC003973.2-201ENST00000596778 PNISRQ8TF01 805 aaKnown RBP8.84□□□□□ -0.99
AC003973.2-201ENST00000596778 DCAF5Q96JK2 942 aa8.84□□□□□ -0.99
AC003973.2-201ENST00000596778 BCL11BQ9C0K0 894 aaPredicted RBP8.84□□□□□ -0.99
AC003973.2-201ENST00000596778 TNS1Q9HBL0 1735 aaKnown RBP8.83□□□□□ -1
AC003973.2-201ENST00000596778 MRC1P22897 1456 aa8.83□□□□□ -1
AC003973.2-201ENST00000596778 ERVV-2B6SEH9 535 aa8.83□□□□□ -1
AC003973.2-201ENST00000596778 HMOX1P09601 288 aa8.83□□□□□ -1
AC003973.2-201ENST00000596778 CNGB1Q14028 1251 aaPredicted RBP8.83□□□□□ -1
AC003973.2-201ENST00000596778 DIEXFQ68CQ4 756 aaKnown RBP8.83□□□□□ -1
AC003973.2-201ENST00000596778 CEMIPQ8WUJ3 1361 aa8.82□□□□□ -1
AC003973.2-201ENST00000596778 PLSCR1O15162 318 aa8.82□□□□□ -1
AC003973.2-201ENST00000596778 NEFMP07197 916 aa8.82□□□□□ -1
AC003973.2-201ENST00000596778 PRKAR2BP31323 418 aa8.82□□□□□ -1
AC003973.2-201ENST00000596778 WDR43Q15061 677 aaKnown RBP eCLIP8.82□□□□□ -1
AC003973.2-201ENST00000596778 C1orf141Q5JVX7 400 aa8.82□□□□□ -1
AC003973.2-201ENST00000596778 NGEFQ8N5V2 710 aa8.82□□□□□ -1
AC003973.2-201ENST00000596778 UPF1Q92900 1129 aaKnown RBP eCLIP8.82□□□□□ -1
AC003973.2-201ENST00000596778 SCN11AQ9UI33 1791 aa8.81□□□□□ -1
AC003973.2-201ENST00000596778 KDM6AO15550 1401 aaPredicted RBP8.81□□□□□ -1
AC003973.2-201ENST00000596778 MTHFSDQ2M296 383 aaKnown RBP8.81□□□□□ -1
AC003973.2-201ENST00000596778 ZNF530Q6P9A1 599 aaPredicted RBP8.81□□□□□ -1
AC003973.2-201ENST00000596778 ADAMTS8Q9UP79 889 aa8.81□□□□□ -1
AC003973.2-201ENST00000596778 ZNF831Q5JPB2 1677 aa8.81□□□□□ -1
AC003973.2-201ENST00000596778 DOT1LQ8TEK3 1739 aa8.81□□□□□ -1
AC003973.2-201ENST00000596778 TOGARAM1Q9Y4F4 1720 aa8.81□□□□□ -1
AC003973.2-201ENST00000596778 MAP3K5Q99683 1374 aa8.8□□□□□ -1
AC003973.2-201ENST00000596778 GNAT3A8MTJ3 354 aa8.8□□□□□ -1
AC003973.2-201ENST00000596778 DDX54Q8TDD1 881 aaKnown RBP8.8□□□□□ -1
AC003973.2-201ENST00000596778 RUNDC1Q96C34 613 aa8.8□□□□□ -1
AC003973.2-201ENST00000596778 PHACTR3Q96KR7 559 aa8.8□□□□□ -1
AC003973.2-201ENST00000596778 MRS2Q9HD23 443 aa8.8□□□□□ -1
AC003973.2-201ENST00000596778 CICQ96RK0 1608 aaPredicted RBP8.8□□□□□ -1
AC003973.2-201ENST00000596778 NFE2L2Q16236 605 aa8.79□□□□□ -1
AC003973.2-201ENST00000596778 PELP1Q8IZL8 1130 aaKnown RBP8.79□□□□□ -1
AC003973.2-201ENST00000596778 MAPK8IP3Q9UPT6 1336 aa8.79□□□□□ -1
AC003973.2-201ENST00000596778 GTPBP6O43824 516 aaPredicted RBP8.78□□□□□ -1
AC003973.2-201ENST00000596778 LMOD3Q0VAK6 560 aa8.78□□□□□ -1
AC003973.2-201ENST00000596778 SF3B2Q13435 895 aaKnown RBP8.78□□□□□ -1
AC003973.2-201ENST00000596778 CCDC27Q2M243 656 aa8.78□□□□□ -1
AC003973.2-201ENST00000596778 CCDC184Q52MB2 194 aa8.78□□□□□ -1
AC003973.2-201ENST00000596778 BABAM1Q9NWV8 329 aa8.78□□□□□ -1
AC003973.2-201ENST00000596778 SIPA1L3O60292 1781 aaPredicted RBP8.78□□□□□ -1
AC003973.2-201ENST00000596778 BTAF1O14981 1849 aa8.78□□□□□ -1
AC003973.2-201ENST00000596778 ITGB4P16144 1822 aa8.78□□□□□ -1
AC003973.2-201ENST00000596778 PAPPAQ13219 1627 aa8.77□□□□□ -1
AC003973.2-201ENST00000596778 LY75O60449 1722 aa8.77□□□□□ -1.01
AC003973.2-201ENST00000596778 RNMTO43148 476 aaKnown RBP8.77□□□□□ -1.01
AC003973.2-201ENST00000596778 TRIM37O94972 964 aa8.77□□□□□ -1.01
AC003973.2-201ENST00000596778 TMPOP42166 694 aaKnown RBP8.77□□□□□ -1.01
AC003973.2-201ENST00000596778 BAG6P46379 1132 aa8.77□□□□□ -1.01
AC003973.2-201ENST00000596778 SMARCC1Q92922 1105 aaPredicted RBP8.77□□□□□ -1.01
AC003973.2-201ENST00000596778 SCUBE2Q9NQ36 999 aa8.77□□□□□ -1.01
AC003973.2-201ENST00000596778 ZBTB47Q9UFB7 747 aaPredicted RBP8.77□□□□□ -1.01
AC003973.2-201ENST00000596778 FARP1Q9Y4F1 1045 aaPredicted RBP8.77□□□□□ -1.01
AC003973.2-201ENST00000596778 RREB1Q92766 1687 aa8.77□□□□□ -1.01
AC003973.2-201ENST00000596778 VIRMAQ69YN4 1812 aaKnown RBP8.77□□□□□ -1.01
AC003973.2-201ENST00000596778 PRR29P0C7W0 189 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms