RNA–Protein interactions for RNA: ENST00000595049.5

SIN3B-205, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2

Gene SIN3B, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-205ENST00000595049 CEMIPQ8WUJ3 1361 aa28.37■■■□□ 2.13
SIN3B-205ENST00000595049 PNISRQ8TF01 805 aaKnown RBP28.37■■■□□ 2.13
SIN3B-205ENST00000595049 ANO8Q9HCE9 1232 aaPredicted RBP28.37■■■□□ 2.13
SIN3B-205ENST00000595049 MRS2Q9HD23 443 aa28.37■■■□□ 2.13
SIN3B-205ENST00000595049 MAPK8IP3Q9UPT6 1336 aa28.37■■■□□ 2.13
SIN3B-205ENST00000595049 CCNL1Q9UK58 526 aaPredicted RBP28.36■■■□□ 2.13
SIN3B-205ENST00000595049 PAPPAQ13219 1627 aa28.36■■■□□ 2.13
SIN3B-205ENST00000595049 SIPA1L3O60292 1781 aaPredicted RBP28.35■■■□□ 2.13
SIN3B-205ENST00000595049 HTATSF1O43719 755 aaKnown RBP28.35■■■□□ 2.13
SIN3B-205ENST00000595049 DCTN1Q14203 1278 aa28.35■■■□□ 2.13
SIN3B-205ENST00000595049 NBPF14Q5TI25 921 aa28.35■■■□□ 2.13
SIN3B-205ENST00000595049 RUNDC1Q96C34 613 aa28.35■■■□□ 2.13
SIN3B-205ENST00000595049 MCM10Q7L590 875 aa28.34■■■□□ 2.13
SIN3B-205ENST00000595049 PSDA5PKW4 1024 aaPredicted RBP28.33■■■□□ 2.13
SIN3B-205ENST00000595049 R3HDM1Q15032 1099 aaKnown RBP28.33■■■□□ 2.13
SIN3B-205ENST00000595049 LOC102724428A0A0B4J2F2 783 aa28.32■■■□□ 2.12
SIN3B-205ENST00000595049 TMPOP42166 694 aaKnown RBP28.32■■■□□ 2.12
SIN3B-205ENST00000595049 SIK1P57059 783 aa28.32■■■□□ 2.12
SIN3B-205ENST00000595049 SLC4A9Q96Q91 983 aa28.32■■■□□ 2.12
SIN3B-205ENST00000595049 TAF1LQ8IZX4 1826 aa28.32■■■□□ 2.12
SIN3B-205ENST00000595049 RTF1Q92541 710 aaKnown RBP28.31■■■□□ 2.12
SIN3B-205ENST00000595049 TEFQ10587 303 aa28.3■■■□□ 2.12
SIN3B-205ENST00000595049 SLC39A6Q13433 755 aa28.3■■■□□ 2.12
SIN3B-205ENST00000595049 RIPK4P57078 832 aa28.29■■■□□ 2.12
SIN3B-205ENST00000595049 SLC15A2Q16348 729 aa28.29■■■□□ 2.12
SIN3B-205ENST00000595049 ZNF827Q17R98 1081 aa28.29■■■□□ 2.12
SIN3B-205ENST00000595049 AKT1S1Q96B36 256 aa28.29■■■□□ 2.12
SIN3B-205ENST00000595049 RRP7AQ9Y3A4 280 aaKnown RBP28.28■■■□□ 2.12
SIN3B-205ENST00000595049 ITPK1Q13572 414 aa28.27■■■□□ 2.12
SIN3B-205ENST00000595049 RBM42Q9BTD8 480 aaKnown RBP28.27■■■□□ 2.12
SIN3B-205ENST00000595049 STK32BQ9NY57 414 aa28.27■■■□□ 2.12
SIN3B-205ENST00000595049 C5P01031 1676 aa28.26■■■□□ 2.12
SIN3B-205ENST00000595049 PTCD1O75127 700 aaKnown RBP28.26■■■□□ 2.11
SIN3B-205ENST00000595049 DIEXFQ68CQ4 756 aaKnown RBP28.26■■■□□ 2.11
SIN3B-205ENST00000595049 ZNF831Q5JPB2 1677 aa28.26■■■□□ 2.11
SIN3B-205ENST00000595049 ATP6V1AP38606 617 aa28.25■■■□□ 2.11
SIN3B-205ENST00000595049 THUMPD2Q9BTF0 503 aaKnown RBP28.25■■■□□ 2.11
SIN3B-205ENST00000595049 LINC00116Q8NCU8 138 aa28.24■■■□□ 2.11
SIN3B-205ENST00000595049 APAF1O14727 1248 aa28.23■■■□□ 2.11
SIN3B-205ENST00000595049 KCNQ3O43525 872 aa28.23■■■□□ 2.11
SIN3B-205ENST00000595049 NEUROD2Q15784 382 aa28.23■■■□□ 2.11
SIN3B-205ENST00000595049 UBR2Q8IWV8 1755 aa28.23■■■□□ 2.11
SIN3B-205ENST00000595049 KCPQ6ZWJ8 1503 aa28.23■■■□□ 2.11
SIN3B-205ENST00000595049 TRIM35Q9UPQ4 493 aa28.22■■■□□ 2.11
SIN3B-205ENST00000595049 TUBGCP6Q96RT7 1819 aa28.21■■■□□ 2.11
SIN3B-205ENST00000595049 TAF7Q15545 349 aaPredicted RBP28.21■■■□□ 2.11
SIN3B-205ENST00000595049 ZNF790Q6PG37 636 aa28.21■■■□□ 2.11
SIN3B-205ENST00000595049 PDGFDQ9GZP0 370 aaPredicted RBP28.21■■■□□ 2.11
SIN3B-205ENST00000595049 C4BP0C0L5 1744 aa28.21■■■□□ 2.11
SIN3B-205ENST00000595049 BTBD11A6QL63 1104 aa28.2■■■□□ 2.1
SIN3B-205ENST00000595049 TJP1Q07157 1748 aa28.18■■■□□ 2.1
SIN3B-205ENST00000595049 MIS18AQ9NYP9 233 aa28.18■■■□□ 2.1
SIN3B-205ENST00000595049 COL5A3P25940 1745 aaPredicted RBP28.18■■■□□ 2.1
SIN3B-205ENST00000595049 QSER1Q2KHR3 1735 aa28.18■■■□□ 2.1
SIN3B-205ENST00000595049 CASZ1Q86V15 1759 aa28.17■■■□□ 2.1
SIN3B-205ENST00000595049 ZNF496Q96IT1 587 aaPredicted RBP28.17■■■□□ 2.1
SIN3B-205ENST00000595049 CICQ96RK0 1608 aaPredicted RBP28.17■■■□□ 2.1
SIN3B-205ENST00000595049 CCER2I3L3R5 266 aa28.16■■■□□ 2.1
SIN3B-205ENST00000595049 HMGB2P26583 209 aaKnown RBP28.16■■■□□ 2.1
SIN3B-205ENST00000595049 LMOD3Q0VAK6 560 aa28.16■■■□□ 2.1
SIN3B-205ENST00000595049 FAM9BQ8IZU0 186 aa28.16■■■□□ 2.1
SIN3B-205ENST00000595049 TTC5Q8N0Z6 440 aa28.16■■■□□ 2.1
SIN3B-205ENST00000595049 TFCP2L1Q9NZI6 479 aa28.16■■■□□ 2.1
SIN3B-205ENST00000595049 MYH14Q7Z406 1995 aaKnown RBP28.16■■■□□ 2.1
SIN3B-205ENST00000595049 AMIGO3Q86WK7 504 aa28.15■■■□□ 2.1
SIN3B-205ENST00000595049 DNAJC10Q8IXB1 793 aa28.15■■■□□ 2.1
SIN3B-205ENST00000595049 PNPLA7Q6ZV29 1317 aa28.15■■■□□ 2.1
SIN3B-205ENST00000595049 VSIG10Q8N0Z9 540 aa28.14■■■□□ 2.1
SIN3B-205ENST00000595049 MIER1Q8N108 512 aa28.14■■■□□ 2.1
SIN3B-205ENST00000595049 UBR3Q6ZT12 1888 aa28.14■■■□□ 2.1
SIN3B-205ENST00000595049 SENP3-EIF4A1A0A087X0R7 540 aa28.13■■■□□ 2.09
SIN3B-205ENST00000595049 HEG1Q9ULI3 1381 aa28.12■■■□□ 2.09
SIN3B-205ENST00000595049 KDM3BQ7LBC6 1761 aa28.12■■■□□ 2.09
SIN3B-205ENST00000595049 RC3H1Q5TC82 1133 aaKnown RBP28.12■■■□□ 2.09
SIN3B-205ENST00000595049 SMIM5Q71RC9 77 aa28.12■■■□□ 2.09
SIN3B-205ENST00000595049 AK7Q96M32 723 aa28.11■■■□□ 2.09
SIN3B-205ENST00000595049 FMNL2Q96PY5 1086 aa28.11■■■□□ 2.09
SIN3B-205ENST00000595049 COL23A1Q86Y22 540 aaPredicted RBP28.1■■■□□ 2.09
SIN3B-205ENST00000595049 CNTNAP4Q9C0A0 1308 aa28.1■■■□□ 2.09
SIN3B-205ENST00000595049 CYP19A1P11511 503 aaPredicted RBP28.09■■■□□ 2.09
SIN3B-205ENST00000595049 CRKLP46109 303 aaKnown RBP28.08■■■□□ 2.09
SIN3B-205ENST00000595049 INTS5Q6P9B9 1019 aaKnown RBP28.08■■■□□ 2.09
SIN3B-205ENST00000595049 GNPATO15228 680 aa28.07■■■□□ 2.08
SIN3B-205ENST00000595049 BABAM1Q9NWV8 329 aa28.06■■■□□ 2.08
SIN3B-205ENST00000595049 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.05■■■□□ 2.08
SIN3B-205ENST00000595049 PRAMEF22A3QJZ6 481 aa28.05■■■□□ 2.08
SIN3B-205ENST00000595049 CHL1O00533 1208 aa28.05■■■□□ 2.08
SIN3B-205ENST00000595049 RPS6KA4O75676 772 aa28.05■■■□□ 2.08
SIN3B-205ENST00000595049 EIF4A1P60842 406 aaKnown RBP28.05■■■□□ 2.08
SIN3B-205ENST00000595049 ZBTB7AO95365 584 aa28.04■■■□□ 2.08
SIN3B-205ENST00000595049 TSPYL4Q9UJ04 414 aa28.04■■■□□ 2.08
SIN3B-205ENST00000595049 USP16Q9Y5T5 823 aa28.04■■■□□ 2.08
SIN3B-205ENST00000595049 SSFA2P28290 1259 aa28.03■■■□□ 2.08
SIN3B-205ENST00000595049 CCDC27Q2M243 656 aa28.03■■■□□ 2.08
SIN3B-205ENST00000595049 NCBP3Q53F19 620 aaKnown RBP28.03■■■□□ 2.08
SIN3B-205ENST00000595049 FLAD1Q8NFF5 587 aa28.03■■■□□ 2.08
SIN3B-205ENST00000595049 TEX13AQ9BXU3 409 aaPredicted RBP28.03■■■□□ 2.08
SIN3B-205ENST00000595049 CCDC87Q9NVE4 849 aa28.03■■■□□ 2.08
SIN3B-205ENST00000595049 PHF14O94880 888 aa28.02■■■□□ 2.08
SIN3B-205ENST00000595049 SNRPA1P09661 255 aaKnown RBP28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms