RNA–Protein interactions for RNA: ENST00000594552.5

CAPN12-204, Transcript of calpain 12, humanhuman

TSL 2

Gene CAPN12, Length 1,046 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-204ENST00000594552 GPR162Q16538 588 aa17.69■□□□□ 0.42
CAPN12-204ENST00000594552 PHF14O94880 888 aa17.68■□□□□ 0.42
CAPN12-204ENST00000594552 HSP90AB1P08238 724 aaKnown RBP17.68■□□□□ 0.42
CAPN12-204ENST00000594552 ZEB1P37275 1124 aaPredicted RBP17.68■□□□□ 0.42
CAPN12-204ENST00000594552 NKX1-1Q15270 411 aaPredicted RBP17.68■□□□□ 0.42
CAPN12-204ENST00000594552 MSL1Q68DK7 614 aa17.68■□□□□ 0.42
CAPN12-204ENST00000594552 PIGBQ92521 554 aa17.68■□□□□ 0.42
CAPN12-204ENST00000594552 COL24A1Q17RW2 1714 aa17.67■□□□□ 0.42
CAPN12-204ENST00000594552 COL23A1Q86Y22 540 aaPredicted RBP17.67■□□□□ 0.42
CAPN12-204ENST00000594552 PLEKHO1Q53GL0 409 aaPredicted RBP17.66■□□□□ 0.42
CAPN12-204ENST00000594552 C1orf141Q5JVX7 400 aa17.66■□□□□ 0.42
CAPN12-204ENST00000594552 LOC102724428A0A0B4J2F2 783 aa17.65■□□□□ 0.42
CAPN12-204ENST00000594552 SIK1P57059 783 aa17.65■□□□□ 0.42
CAPN12-204ENST00000594552 ZNF530Q6P9A1 599 aaPredicted RBP17.65■□□□□ 0.42
CAPN12-204ENST00000594552 CHD4Q14839 1912 aa17.64■□□□□ 0.42
CAPN12-204ENST00000594552 AMOTQ4VCS5 1084 aa17.64■□□□□ 0.41
CAPN12-204ENST00000594552 ATP6V1AP38606 617 aa17.63■□□□□ 0.41
CAPN12-204ENST00000594552 AMER1Q5JTC6 1135 aaPredicted RBP17.63■□□□□ 0.41
CAPN12-204ENST00000594552 NPC1L1Q9UHC9 1359 aa17.63■□□□□ 0.41
CAPN12-204ENST00000594552 UBR3Q6ZT12 1888 aa17.63■□□□□ 0.41
CAPN12-204ENST00000594552 GNPATO15228 680 aa17.62■□□□□ 0.41
CAPN12-204ENST00000594552 DCAF5Q96JK2 942 aa17.62■□□□□ 0.41
CAPN12-204ENST00000594552 ASAP1Q9ULH1 1129 aa17.62■□□□□ 0.41
CAPN12-204ENST00000594552 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.61■□□□□ 0.41
CAPN12-204ENST00000594552 PER1O15534 1290 aaPredicted RBP17.61■□□□□ 0.41
CAPN12-204ENST00000594552 SSFA2P28290 1259 aa17.61■□□□□ 0.41
CAPN12-204ENST00000594552 CABP4P57796 275 aa17.61■□□□□ 0.41
CAPN12-204ENST00000594552 NLGN2Q8NFZ4 835 aa17.61■□□□□ 0.41
CAPN12-204ENST00000594552 RBM42Q9BTD8 480 aaKnown RBP17.61■□□□□ 0.41
CAPN12-204ENST00000594552 ERVV-2B6SEH9 535 aa17.6■□□□□ 0.41
CAPN12-204ENST00000594552 DSG3P32926 999 aa17.6■□□□□ 0.41
CAPN12-204ENST00000594552 SULT6B1Q6IMI4 303 aa17.6■□□□□ 0.41
CAPN12-204ENST00000594552 LINC00116Q8NCU8 138 aa17.6■□□□□ 0.41
CAPN12-204ENST00000594552 MTHFSP49914 203 aa17.59■□□□□ 0.41
CAPN12-204ENST00000594552 AEBP1Q8IUX7 1158 aa17.59■□□□□ 0.41
CAPN12-204ENST00000594552 ATG3Q9NT62 314 aa17.58■□□□□ 0.4
CAPN12-204ENST00000594552 KDM6AO15550 1401 aaPredicted RBP17.57■□□□□ 0.4
CAPN12-204ENST00000594552 CC2D1BQ5T0F9 858 aaKnown RBP17.57■□□□□ 0.4
CAPN12-204ENST00000594552 GRIN3BO60391 1043 aa17.56■□□□□ 0.4
CAPN12-204ENST00000594552 ITPK1Q13572 414 aa17.56■□□□□ 0.4
CAPN12-204ENST00000594552 CNGB1Q14028 1251 aaPredicted RBP17.56■□□□□ 0.4
CAPN12-204ENST00000594552 ZNF784Q8NCA9 323 aaPredicted RBP17.56■□□□□ 0.4
CAPN12-204ENST00000594552 RTCBQ9Y3I0 505 aaKnown RBP17.56■□□□□ 0.4
CAPN12-204ENST00000594552 KDRP35968 1356 aa17.55■□□□□ 0.4
CAPN12-204ENST00000594552 IL13P35225 146 aa17.55■□□□□ 0.4
CAPN12-204ENST00000594552 CD2APQ9Y5K6 639 aa17.55■□□□□ 0.4
CAPN12-204ENST00000594552 SMIM5Q71RC9 77 aa17.54■□□□□ 0.4
CAPN12-204ENST00000594552 ZNF831Q5JPB2 1677 aa17.54■□□□□ 0.4
CAPN12-204ENST00000594552 AMIGO3Q86WK7 504 aa17.53■□□□□ 0.4
CAPN12-204ENST00000594552 COL5A3P25940 1745 aaPredicted RBP17.52■□□□□ 0.4
CAPN12-204ENST00000594552 DIAPH1O60610 1272 aaKnown RBP17.52■□□□□ 0.4
CAPN12-204ENST00000594552 PTCD1O75127 700 aaKnown RBP17.52■□□□□ 0.4
CAPN12-204ENST00000594552 HMOX1P09601 288 aa17.52■□□□□ 0.4
CAPN12-204ENST00000594552 AKAP4Q5JQC9 854 aa17.52■□□□□ 0.4
CAPN12-204ENST00000594552 CNTNAP4Q9C0A0 1308 aa17.51■□□□□ 0.39
CAPN12-204ENST00000594552 SCN11AQ9UI33 1791 aa17.51■□□□□ 0.39
CAPN12-204ENST00000594552 ABCB7O75027 752 aa17.51■□□□□ 0.39
CAPN12-204ENST00000594552 TRAPPC3LQ5T215 181 aa17.51■□□□□ 0.39
CAPN12-204ENST00000594552 YBX3P16989 372 aaKnown RBP eCLIP17.5■□□□□ 0.39
CAPN12-204ENST00000594552 RFC4P35249 363 aa17.5■□□□□ 0.39
CAPN12-204ENST00000594552 UTRNP46939 3433 aa17.5■□□□□ 0.39
CAPN12-204ENST00000594552 MMP10P09238 476 aa17.49■□□□□ 0.39
CAPN12-204ENST00000594552 NFATC2IPQ8NCF5 419 aa17.49■□□□□ 0.39
CAPN12-204ENST00000594552 U2SURPO15042 1029 aaKnown RBP17.48■□□□□ 0.39
CAPN12-204ENST00000594552 RC3H1Q5TC82 1133 aaKnown RBP17.48■□□□□ 0.39
CAPN12-204ENST00000594552 CICQ96RK0 1608 aaPredicted RBP17.47■□□□□ 0.39
CAPN12-204ENST00000594552 NLGN1Q8N2Q7 840 aa17.47■□□□□ 0.39
CAPN12-204ENST00000594552 WWC3Q9ULE0 1092 aa17.47■□□□□ 0.39
CAPN12-204ENST00000594552 C4AP0C0L4 1744 aa17.47■□□□□ 0.39
CAPN12-204ENST00000594552 RPS6KA4O75676 772 aa17.46■□□□□ 0.39
CAPN12-204ENST00000594552 CRKLP46109 303 aaKnown RBP17.46■□□□□ 0.39
CAPN12-204ENST00000594552 CFAP53Q96M91 514 aa17.46■□□□□ 0.39
CAPN12-204ENST00000594552 SLC4A9Q96Q91 983 aa17.46■□□□□ 0.39
CAPN12-204ENST00000594552 SLC52A2Q9HAB3 445 aa17.46■□□□□ 0.39
CAPN12-204ENST00000594552 VIRMAQ69YN4 1812 aaKnown RBP17.46■□□□□ 0.39
CAPN12-204ENST00000594552 GOLGB1Q14789 3259 aaKnown RBP17.45■□□□□ 0.38
CAPN12-204ENST00000594552 MRC1P22897 1456 aa17.45■□□□□ 0.38
CAPN12-204ENST00000594552 TJP1Q07157 1748 aa17.45■□□□□ 0.38
CAPN12-204ENST00000594552 GIGYF1O75420 1035 aaPredicted RBP17.45■□□□□ 0.38
CAPN12-204ENST00000594552 ARHGEF1Q92888 912 aaKnown RBP17.45■□□□□ 0.38
CAPN12-204ENST00000594552 CCDC87Q9NVE4 849 aa17.45■□□□□ 0.38
CAPN12-204ENST00000594552 PARP3Q9Y6F1 533 aa17.45■□□□□ 0.38
CAPN12-204ENST00000594552 RNMTO43148 476 aaKnown RBP17.43■□□□□ 0.38
CAPN12-204ENST00000594552 POLA2Q14181 598 aa17.43■□□□□ 0.38
CAPN12-204ENST00000594552 MTHFSDQ2M296 383 aaKnown RBP17.42■□□□□ 0.38
CAPN12-204ENST00000594552 TTC5Q8N0Z6 440 aa17.42■□□□□ 0.38
CAPN12-204ENST00000594552 GAS2L2Q8NHY3 880 aa17.42■□□□□ 0.38
CAPN12-204ENST00000594552 COL3A1P02461 1466 aaPredicted RBP17.42■□□□□ 0.38
CAPN12-204ENST00000594552 C10orf71Q711Q0 1435 aa17.41■□□□□ 0.38
CAPN12-204ENST00000594552 MYH14Q7Z406 1995 aaKnown RBP17.41■□□□□ 0.38
CAPN12-204ENST00000594552 GYS1P13807 737 aa17.41■□□□□ 0.38
CAPN12-204ENST00000594552 LGR6Q9HBX8 967 aa17.41■□□□□ 0.38
CAPN12-204ENST00000594552 PXDNLA1KZ92 1463 aa17.4■□□□□ 0.38
CAPN12-204ENST00000594552 ZPR1O75312 459 aa17.4■□□□□ 0.38
CAPN12-204ENST00000594552 TEFQ10587 303 aa17.4■□□□□ 0.38
CAPN12-204ENST00000594552 NUDCQ9Y266 331 aa17.4■□□□□ 0.38
CAPN12-204ENST00000594552 KIF13BQ9NQT8 1826 aa17.4■□□□□ 0.38
CAPN12-204ENST00000594552 ATP10DQ9P241 1426 aa17.39■□□□□ 0.38
CAPN12-204ENST00000594552 SENP3-EIF4A1A0A087X0R7 540 aa17.39■□□□□ 0.37
CAPN12-204ENST00000594552 SLC39A6Q13433 755 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms