RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 NR1H3Q13133 447 aa6.04□□□□□ -1.44
LINC00649-204ENST00000593977 NFATC2IPQ8NCF5 419 aa6.04□□□□□ -1.44
LINC00649-204ENST00000593977 UBE2Q2Q8WVN8 375 aa6.04□□□□□ -1.44
LINC00649-204ENST00000593977 SYMPKQ92797 1274 aaKnown RBP6.04□□□□□ -1.44
LINC00649-204ENST00000593977 UTRNP46939 3433 aa6.03□□□□□ -1.44
LINC00649-204ENST00000593977 NUP153P49790 1475 aaKnown RBP6.03□□□□□ -1.44
LINC00649-204ENST00000593977 BLMP54132 1417 aaPredicted RBP6.03□□□□□ -1.44
LINC00649-204ENST00000593977 PER1O15534 1290 aaPredicted RBP6.03□□□□□ -1.44
LINC00649-204ENST00000593977 ELOAQ14241 798 aaKnown RBP6.03□□□□□ -1.44
LINC00649-204ENST00000593977 TBC1D9Q6ZT07 1266 aa6.03□□□□□ -1.44
LINC00649-204ENST00000593977 SAMD7Q7Z3H4 446 aa6.03□□□□□ -1.44
LINC00649-204ENST00000593977 GNEQ9Y223 722 aaKnown RBP6.03□□□□□ -1.44
LINC00649-204ENST00000593977 CLTCQ00610 1675 aaKnown RBP6.02□□□□□ -1.45
LINC00649-204ENST00000593977 PBX2P40425 430 aa6.02□□□□□ -1.45
LINC00649-204ENST00000593977 CDCA8Q53HL2 280 aa6.02□□□□□ -1.45
LINC00649-204ENST00000593977 MORN1Q5T089 497 aa6.02□□□□□ -1.45
LINC00649-204ENST00000593977 LYPD8Q6UX82 237 aa6.02□□□□□ -1.45
LINC00649-204ENST00000593977 SREK1Q8WXA9 508 aaKnown RBP6.02□□□□□ -1.45
LINC00649-204ENST00000593977 PRR14Q9BWN1 585 aa6.02□□□□□ -1.45
LINC00649-204ENST00000593977 NBPF3Q9H094 633 aa6.02□□□□□ -1.45
LINC00649-204ENST00000593977 TNRQ92752 1358 aa6.02□□□□□ -1.45
LINC00649-204ENST00000593977 ZC3H4Q9UPT8 1303 aaKnown RBP6.01□□□□□ -1.45
LINC00649-204ENST00000593977 SHPRHQ149N8 1683 aa6.01□□□□□ -1.45
LINC00649-204ENST00000593977 ZBBXA8MT70 800 aa6.01□□□□□ -1.45
LINC00649-204ENST00000593977 ACTN4O43707 911 aaKnown RBP6.01□□□□□ -1.45
LINC00649-204ENST00000593977 RNF40O75150 1001 aa6.01□□□□□ -1.45
LINC00649-204ENST00000593977 TCF3P15923 654 aa6.01□□□□□ -1.45
LINC00649-204ENST00000593977 LSM11P83369 360 aaKnown RBP eCLIP6.01□□□□□ -1.45
LINC00649-204ENST00000593977 CERS3Q8IU89 383 aa6.01□□□□□ -1.45
LINC00649-204ENST00000593977 IRX2Q9BZI1 471 aaPredicted RBP6.01□□□□□ -1.45
LINC00649-204ENST00000593977 SCAF11Q99590 1463 aaKnown RBP6.01□□□□□ -1.45
LINC00649-204ENST00000593977 MAP3K1Q13233 1512 aa6□□□□□ -1.45
LINC00649-204ENST00000593977 FBXO45P0C2W1 286 aa6□□□□□ -1.45
LINC00649-204ENST00000593977 ZNF16P17020 682 aaPredicted RBP6□□□□□ -1.45
LINC00649-204ENST00000593977 PRELPP51888 382 aa6□□□□□ -1.45
LINC00649-204ENST00000593977 KANK4Q5T7N3 995 aaPredicted RBP6□□□□□ -1.45
LINC00649-204ENST00000593977 DNAJC14Q6Y2X3 702 aaPredicted RBP6□□□□□ -1.45
LINC00649-204ENST00000593977 ZNF592Q92610 1267 aa6□□□□□ -1.45
LINC00649-204ENST00000593977 C8orf37Q96NL8 207 aa6□□□□□ -1.45
LINC00649-204ENST00000593977 FKBPLQ9UIM3 349 aa6□□□□□ -1.45
LINC00649-204ENST00000593977 VPS9D1Q9Y2B5 631 aa6□□□□□ -1.45
LINC00649-204ENST00000593977 SLC27A5Q9Y2P5 690 aa6□□□□□ -1.45
LINC00649-204ENST00000593977 ZC3H13Q5T200 1668 aaKnown RBP6□□□□□ -1.45
LINC00649-204ENST00000593977 ATP7AQ04656 1500 aa5.99□□□□□ -1.45
LINC00649-204ENST00000593977 FAM135AQ9P2D6 1515 aa5.99□□□□□ -1.45
LINC00649-204ENST00000593977 GGT6Q6P531 493 aa5.99□□□□□ -1.45
LINC00649-204ENST00000593977 PLEKHM2Q8IWE5 1019 aa5.99□□□□□ -1.45
LINC00649-204ENST00000593977 ANKRD13AQ8IZ07 590 aa5.99□□□□□ -1.45
LINC00649-204ENST00000593977 SALL2Q9Y467 1007 aaPredicted RBP5.99□□□□□ -1.45
LINC00649-204ENST00000593977 ITSN2Q9NZM3 1697 aa5.98□□□□□ -1.45
LINC00649-204ENST00000593977 UGGT1Q9NYU2 1555 aa5.98□□□□□ -1.45
LINC00649-204ENST00000593977 RGS20O76081 388 aa5.98□□□□□ -1.45
LINC00649-204ENST00000593977 R3HDM1Q15032 1099 aaKnown RBP5.98□□□□□ -1.45
LINC00649-204ENST00000593977 NOM1Q5C9Z4 860 aaKnown RBP5.98□□□□□ -1.45
LINC00649-204ENST00000593977 DMRTA1Q5VZB9 504 aa5.98□□□□□ -1.45
LINC00649-204ENST00000593977 CCER1Q8TC90 406 aaPredicted RBP5.98□□□□□ -1.45
LINC00649-204ENST00000593977 ZFRQ96KR1 1074 aaKnown RBP5.98□□□□□ -1.45
LINC00649-204ENST00000593977 USB1Q9BQ65 265 aaKnown RBP5.98□□□□□ -1.45
LINC00649-204ENST00000593977 RTEL1-TNFRSF6BF6WH68 1400 aa5.98□□□□□ -1.45
LINC00649-204ENST00000593977 MIA2Q96PC5 1412 aa5.98□□□□□ -1.45
LINC00649-204ENST00000593977 KIDINS220Q9ULH0 1771 aa5.98□□□□□ -1.45
LINC00649-204ENST00000593977 USP17L3A6NCW0 530 aa5.97□□□□□ -1.45
LINC00649-204ENST00000593977 USP17L4A6NCW7 530 aa5.97□□□□□ -1.45
LINC00649-204ENST00000593977 USP17L5A8MUK1 530 aa5.97□□□□□ -1.45
LINC00649-204ENST00000593977 F12P00748 615 aaPredicted RBP5.97□□□□□ -1.45
LINC00649-204ENST00000593977 KCNA6P17658 529 aa5.97□□□□□ -1.45
LINC00649-204ENST00000593977 NCLP19338 710 aaKnown RBP5.97□□□□□ -1.45
LINC00649-204ENST00000593977 LTKP29376 864 aa5.97□□□□□ -1.45
LINC00649-204ENST00000593977 PUS10Q3MIT2 529 aaKnown RBP5.97□□□□□ -1.45
LINC00649-204ENST00000593977 USP17L2Q6R6M4 530 aa5.97□□□□□ -1.45
LINC00649-204ENST00000593977 USP17L1Q7RTZ2 530 aa5.97□□□□□ -1.45
LINC00649-204ENST00000593977 SIRT1Q96EB6 747 aa5.97□□□□□ -1.45
LINC00649-204ENST00000593977 LRCH3Q96II8 777 aa5.97□□□□□ -1.45
LINC00649-204ENST00000593977 TRPC5Q9UL62 973 aaPredicted RBP5.97□□□□□ -1.45
LINC00649-204ENST00000593977 NOVA2Q9UNW9 492 aaKnown RBP5.97□□□□□ -1.45
LINC00649-204ENST00000593977 GPSM3Q9Y4H4 160 aa5.97□□□□□ -1.45
LINC00649-204ENST00000593977 DIP2AQ14689 1571 aa5.97□□□□□ -1.45
LINC00649-204ENST00000593977 NLRP1Q9C000 1473 aa5.96□□□□□ -1.45
LINC00649-204ENST00000593977 AHDC1Q5TGY3 1603 aaPredicted RBP5.96□□□□□ -1.45
LINC00649-204ENST00000593977 ANKRD62A6NC57 917 aa5.96□□□□□ -1.46
LINC00649-204ENST00000593977 FAM196BA6NMK8 535 aa5.96□□□□□ -1.46
LINC00649-204ENST00000593977 BHMG1C9JSJ3 638 aaPredicted RBP5.96□□□□□ -1.46
LINC00649-204ENST00000593977 PIK3CDO00329 1044 aa5.96□□□□□ -1.46
LINC00649-204ENST00000593977 SKIP12755 728 aa5.96□□□□□ -1.46
LINC00649-204ENST00000593977 ERCC3P19447 782 aa5.96□□□□□ -1.46
LINC00649-204ENST00000593977 MCCD1P59942 119 aaPredicted RBP5.96□□□□□ -1.46
LINC00649-204ENST00000593977 PTPRNQ16849 979 aa5.96□□□□□ -1.46
LINC00649-204ENST00000593977 TMEM164Q5U3C3 297 aa5.96□□□□□ -1.46
LINC00649-204ENST00000593977 BRICD5Q6PL45 260 aa5.96□□□□□ -1.46
LINC00649-204ENST00000593977 POTEEQ6S8J3 1075 aa5.96□□□□□ -1.46
LINC00649-204ENST00000593977 STK32AQ8WU08 396 aa5.96□□□□□ -1.46
LINC00649-204ENST00000593977 UBXN4Q92575 508 aa5.96□□□□□ -1.46
LINC00649-204ENST00000593977 PPP1R1BQ9UD71 204 aaPredicted RBP5.96□□□□□ -1.46
LINC00649-204ENST00000593977 ZMIZ1Q9ULJ6 1067 aa5.96□□□□□ -1.46
LINC00649-204ENST00000593977 MSH6P52701 1360 aa5.95□□□□□ -1.46
LINC00649-204ENST00000593977 TK2O00142 265 aa5.95□□□□□ -1.46
LINC00649-204ENST00000593977 LZTS3O60299 673 aaPredicted RBP5.95□□□□□ -1.46
LINC00649-204ENST00000593977 GIGYF1O75420 1035 aaPredicted RBP5.95□□□□□ -1.46
LINC00649-204ENST00000593977 ATRNO75882 1429 aa5.95□□□□□ -1.46
LINC00649-204ENST00000593977 FMNL1O95466 1100 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 222.1 ms