RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 ZBTB7AO95365 584 aa19.38■□□□□ 0.69
DDX39A-217ENST00000592391 PNPLA7Q6ZV29 1317 aa19.38■□□□□ 0.69
DDX39A-217ENST00000592391 MAP3K5Q99683 1374 aa19.38■□□□□ 0.69
DDX39A-217ENST00000592391 MYBBP1AQ9BQG0 1328 aaKnown RBP19.38■□□□□ 0.69
DDX39A-217ENST00000592391 SLC52A2Q9HAB3 445 aa19.38■□□□□ 0.69
DDX39A-217ENST00000592391 QSER1Q2KHR3 1735 aa19.37■□□□□ 0.69
DDX39A-217ENST00000592391 ADAMTS7Q9UKP4 1686 aa19.37■□□□□ 0.69
DDX39A-217ENST00000592391 MRC1P22897 1456 aa19.37■□□□□ 0.69
DDX39A-217ENST00000592391 ZNF316A6NFI3 1004 aaPredicted RBP19.37■□□□□ 0.69
DDX39A-217ENST00000592391 GNAT3A8MTJ3 354 aa19.36■□□□□ 0.69
DDX39A-217ENST00000592391 ATP6V1AP38606 617 aa19.36■□□□□ 0.69
DDX39A-217ENST00000592391 MTFR1LQ9H019 292 aa19.36■□□□□ 0.69
DDX39A-217ENST00000592391 TAF1LQ8IZX4 1826 aa19.36■□□□□ 0.69
DDX39A-217ENST00000592391 ITPK1Q13572 414 aa19.35■□□□□ 0.69
DDX39A-217ENST00000592391 RBM42Q9BTD8 480 aaKnown RBP19.35■□□□□ 0.69
DDX39A-217ENST00000592391 C4BP0C0L5 1744 aa19.34■□□□□ 0.69
DDX39A-217ENST00000592391 LINC00116Q8NCU8 138 aa19.34■□□□□ 0.69
DDX39A-217ENST00000592391 SLC16A10Q8TF71 515 aa19.34■□□□□ 0.69
DDX39A-217ENST00000592391 SLC4A9Q96Q91 983 aa19.34■□□□□ 0.69
DDX39A-217ENST00000592391 PRKRIP1Q9H875 184 aaPredicted RBP19.34■□□□□ 0.69
DDX39A-217ENST00000592391 ATF5Q9Y2D1 282 aaPredicted RBP19.34■□□□□ 0.69
DDX39A-217ENST00000592391 TUBGCP6Q96RT7 1819 aa19.34■□□□□ 0.69
DDX39A-217ENST00000592391 PTGER2P43116 358 aa19.33■□□□□ 0.68
DDX39A-217ENST00000592391 IL17REQ8NFR9 667 aa19.33■□□□□ 0.68
DDX39A-217ENST00000592391 AK7Q96M32 723 aa19.33■□□□□ 0.68
DDX39A-217ENST00000592391 ZNF831Q5JPB2 1677 aa19.33■□□□□ 0.68
DDX39A-217ENST00000592391 PTCD1O75127 700 aaKnown RBP19.32■□□□□ 0.68
DDX39A-217ENST00000592391 COL23A1Q86Y22 540 aaPredicted RBP19.31■□□□□ 0.68
DDX39A-217ENST00000592391 FLAD1Q8NFF5 587 aa19.31■□□□□ 0.68
DDX39A-217ENST00000592391 PPP1R1BQ9UD71 204 aaPredicted RBP19.31■□□□□ 0.68
DDX39A-217ENST00000592391 VIRMAQ69YN4 1812 aaKnown RBP19.3■□□□□ 0.68
DDX39A-217ENST00000592391 NEFMP07197 916 aa19.3■□□□□ 0.68
DDX39A-217ENST00000592391 TEFQ10587 303 aa19.3■□□□□ 0.68
DDX39A-217ENST00000592391 PLEKHF1Q96S99 279 aa19.3■□□□□ 0.68
DDX39A-217ENST00000592391 SGIP1Q9BQI5 828 aa19.3■□□□□ 0.68
DDX39A-217ENST00000592391 PNNQ9H307 717 aaKnown RBP19.3■□□□□ 0.68
DDX39A-217ENST00000592391 CEMIPQ8WUJ3 1361 aa19.3■□□□□ 0.68
DDX39A-217ENST00000592391 SLC39A6Q13433 755 aa19.29■□□□□ 0.68
DDX39A-217ENST00000592391 MSH5O43196 834 aa19.28■□□□□ 0.68
DDX39A-217ENST00000592391 SSFA2P28290 1259 aa19.28■□□□□ 0.68
DDX39A-217ENST00000592391 AMIGO3Q86WK7 504 aa19.28■□□□□ 0.68
DDX39A-217ENST00000592391 RTF1Q92541 710 aaKnown RBP19.28■□□□□ 0.68
DDX39A-217ENST00000592391 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.27■□□□□ 0.68
DDX39A-217ENST00000592391 GNPATO15228 680 aa19.27■□□□□ 0.68
DDX39A-217ENST00000592391 HTATSF1O43719 755 aaKnown RBP19.27■□□□□ 0.68
DDX39A-217ENST00000592391 RC3H1Q5TC82 1133 aaKnown RBP19.27■□□□□ 0.68
DDX39A-217ENST00000592391 CNTNAP4Q9C0A0 1308 aa19.26■□□□□ 0.67
DDX39A-217ENST00000592391 UBR3Q6ZT12 1888 aa19.26■□□□□ 0.67
DDX39A-217ENST00000592391 PHF14O94880 888 aa19.26■□□□□ 0.67
DDX39A-217ENST00000592391 KCPQ6ZWJ8 1503 aa19.25■□□□□ 0.67
DDX39A-217ENST00000592391 CICQ96RK0 1608 aaPredicted RBP19.25■□□□□ 0.67
DDX39A-217ENST00000592391 COL5A3P25940 1745 aaPredicted RBP19.25■□□□□ 0.67
DDX39A-217ENST00000592391 SMIM5Q71RC9 77 aa19.25■□□□□ 0.67
DDX39A-217ENST00000592391 MCM10Q7L590 875 aa19.25■□□□□ 0.67
DDX39A-217ENST00000592391 MAPK8IP3Q9UPT6 1336 aa19.25■□□□□ 0.67
DDX39A-217ENST00000592391 NFE2L2Q16236 605 aa19.24■□□□□ 0.67
DDX39A-217ENST00000592391 TTC5Q8N0Z6 440 aa19.24■□□□□ 0.67
DDX39A-217ENST00000592391 RTCBQ9Y3I0 505 aaKnown RBP19.24■□□□□ 0.67
DDX39A-217ENST00000592391 SIPA1L3O60292 1781 aaPredicted RBP19.24■□□□□ 0.67
DDX39A-217ENST00000592391 TJP1Q07157 1748 aa19.23■□□□□ 0.67
DDX39A-217ENST00000592391 COL24A1Q17RW2 1714 aa19.23■□□□□ 0.67
DDX39A-217ENST00000592391 POLD1P28340 1107 aa19.23■□□□□ 0.67
DDX39A-217ENST00000592391 ZNF790Q6PG37 636 aa19.23■□□□□ 0.67
DDX39A-217ENST00000592391 VSIG10Q8N0Z9 540 aa19.23■□□□□ 0.67
DDX39A-217ENST00000592391 ARXQ96QS3 562 aa19.23■□□□□ 0.67
DDX39A-217ENST00000592391 UBR2Q8IWV8 1755 aa19.22■□□□□ 0.67
DDX39A-217ENST00000592391 BTBD11A6QL63 1104 aa19.22■□□□□ 0.67
DDX39A-217ENST00000592391 RPS6KA4O75676 772 aa19.22■□□□□ 0.67
DDX39A-217ENST00000592391 CRKLP46109 303 aaKnown RBP19.22■□□□□ 0.67
DDX39A-217ENST00000592391 DCTN1Q14203 1278 aa19.22■□□□□ 0.67
DDX39A-217ENST00000592391 WDR43Q15061 677 aaKnown RBP eCLIP19.22■□□□□ 0.67
DDX39A-217ENST00000592391 DNAJC10Q8IXB1 793 aa19.22■□□□□ 0.67
DDX39A-217ENST00000592391 ADRA2BP18089 450 aa19.21■□□□□ 0.67
DDX39A-217ENST00000592391 MSL1Q68DK7 614 aa19.21■□□□□ 0.67
DDX39A-217ENST00000592391 TRAPPC3LQ5T215 181 aa19.2■□□□□ 0.66
DDX39A-217ENST00000592391 ZNF496Q96IT1 587 aaPredicted RBP19.2■□□□□ 0.66
DDX39A-217ENST00000592391 CYP19A1P11511 503 aaPredicted RBP19.19■□□□□ 0.66
DDX39A-217ENST00000592391 INTS5Q6P9B9 1019 aaKnown RBP19.19■□□□□ 0.66
DDX39A-217ENST00000592391 FHDC1Q9C0D6 1143 aaPredicted RBP19.19■□□□□ 0.66
DDX39A-217ENST00000592391 MYH14Q7Z406 1995 aaKnown RBP19.19■□□□□ 0.66
DDX39A-217ENST00000592391 HEG1Q9ULI3 1381 aa19.19■□□□□ 0.66
DDX39A-217ENST00000592391 ARHGEF1Q92888 912 aaKnown RBP19.18■□□□□ 0.66
DDX39A-217ENST00000592391 FMNL2Q96PY5 1086 aa19.18■□□□□ 0.66
DDX39A-217ENST00000592391 CCDC87Q9NVE4 849 aa19.18■□□□□ 0.66
DDX39A-217ENST00000592391 ADAMTS8Q9UP79 889 aa19.18■□□□□ 0.66
DDX39A-217ENST00000592391 KCNQ3O43525 872 aa19.17■□□□□ 0.66
DDX39A-217ENST00000592391 TAF7Q15545 349 aaPredicted RBP19.17■□□□□ 0.66
DDX39A-217ENST00000592391 SYT17Q9BSW7 474 aa19.17■□□□□ 0.66
DDX39A-217ENST00000592391 DLG5Q8TDM6 1919 aa19.17■□□□□ 0.66
DDX39A-217ENST00000592391 TMPOP42166 694 aaKnown RBP19.16■□□□□ 0.66
DDX39A-217ENST00000592391 CCDC146Q8IYE0 955 aa19.16■□□□□ 0.66
DDX39A-217ENST00000592391 RUNDC1Q96C34 613 aa19.16■□□□□ 0.66
DDX39A-217ENST00000592391 TEX13AQ9BXU3 409 aaPredicted RBP19.16■□□□□ 0.66
DDX39A-217ENST00000592391 ANP32CO43423 234 aa19.15■□□□□ 0.66
DDX39A-217ENST00000592391 STARD3NLO95772 234 aa19.15■□□□□ 0.66
DDX39A-217ENST00000592391 RFC4P35249 363 aa19.15■□□□□ 0.66
DDX39A-217ENST00000592391 RIPK4P57078 832 aa19.15■□□□□ 0.66
DDX39A-217ENST00000592391 THUMPD2Q9BTF0 503 aaKnown RBP19.14■□□□□ 0.65
DDX39A-217ENST00000592391 ZBTB1Q9Y2K1 713 aa19.14■□□□□ 0.65
DDX39A-217ENST00000592391 LMOD3Q0VAK6 560 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms