RNA–Protein interactions for RNA: ENST00000591284.2

AP3D1-209, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 5

Gene AP3D1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-209ENST00000591284 ATG3Q9NT62 314 aa25.88■■□□□ 1.73
AP3D1-209ENST00000591284 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.87■■□□□ 1.73
AP3D1-209ENST00000591284 KDRP35968 1356 aa25.86■■□□□ 1.73
AP3D1-209ENST00000591284 UBR3Q6ZT12 1888 aa25.86■■□□□ 1.73
AP3D1-209ENST00000591284 GNPATO15228 680 aa25.86■■□□□ 1.73
AP3D1-209ENST00000591284 IL13P35225 146 aa25.86■■□□□ 1.73
AP3D1-209ENST00000591284 RBM42Q9BTD8 480 aaKnown RBP25.86■■□□□ 1.73
AP3D1-209ENST00000591284 CD2APQ9Y5K6 639 aa25.86■■□□□ 1.73
AP3D1-209ENST00000591284 GRIN3BO60391 1043 aa25.85■■□□□ 1.73
AP3D1-209ENST00000591284 AEBP1Q8IUX7 1158 aa25.84■■□□□ 1.73
AP3D1-209ENST00000591284 LINC00116Q8NCU8 138 aa25.84■■□□□ 1.73
AP3D1-209ENST00000591284 CC2D1BQ5T0F9 858 aaKnown RBP25.83■■□□□ 1.73
AP3D1-209ENST00000591284 RTCBQ9Y3I0 505 aaKnown RBP25.83■■□□□ 1.73
AP3D1-209ENST00000591284 ZNF831Q5JPB2 1677 aa25.83■■□□□ 1.73
AP3D1-209ENST00000591284 NPC1L1Q9UHC9 1359 aa25.82■■□□□ 1.72
AP3D1-209ENST00000591284 PER1O15534 1290 aaPredicted RBP25.82■■□□□ 1.72
AP3D1-209ENST00000591284 DIAPH1O60610 1272 aaKnown RBP25.82■■□□□ 1.72
AP3D1-209ENST00000591284 ADRA2BP18089 450 aa25.81■■□□□ 1.72
AP3D1-209ENST00000591284 ITPK1Q13572 414 aa25.81■■□□□ 1.72
AP3D1-209ENST00000591284 AKAP4Q5JQC9 854 aa25.81■■□□□ 1.72
AP3D1-209ENST00000591284 TRAPPC3LQ5T215 181 aa25.8■■□□□ 1.72
AP3D1-209ENST00000591284 RC3H1Q5TC82 1133 aaKnown RBP25.8■■□□□ 1.72
AP3D1-209ENST00000591284 NLGN2Q8NFZ4 835 aa25.79■■□□□ 1.72
AP3D1-209ENST00000591284 KDM6AO15550 1401 aaPredicted RBP25.79■■□□□ 1.72
AP3D1-209ENST00000591284 NFATC2IPQ8NCF5 419 aa25.77■■□□□ 1.72
AP3D1-209ENST00000591284 CNTNAP4Q9C0A0 1308 aa25.77■■□□□ 1.72
AP3D1-209ENST00000591284 NLGN1Q8N2Q7 840 aa25.76■■□□□ 1.71
AP3D1-209ENST00000591284 ZNF784Q8NCA9 323 aaPredicted RBP25.76■■□□□ 1.71
AP3D1-209ENST00000591284 SCN11AQ9UI33 1791 aa25.74■■□□□ 1.71
AP3D1-209ENST00000591284 PTCD1O75127 700 aaKnown RBP25.74■■□□□ 1.71
AP3D1-209ENST00000591284 HMOX1P09601 288 aa25.74■■□□□ 1.71
AP3D1-209ENST00000591284 RFC4P35249 363 aa25.74■■□□□ 1.71
AP3D1-209ENST00000591284 CFAP53Q96M91 514 aa25.74■■□□□ 1.71
AP3D1-209ENST00000591284 RPS6KA4O75676 772 aa25.73■■□□□ 1.71
AP3D1-209ENST00000591284 AMIGO3Q86WK7 504 aa25.71■■□□□ 1.71
AP3D1-209ENST00000591284 SLC52A2Q9HAB3 445 aa25.71■■□□□ 1.71
AP3D1-209ENST00000591284 COL5A3P25940 1745 aaPredicted RBP25.7■■□□□ 1.7
AP3D1-209ENST00000591284 U2SURPO15042 1029 aaKnown RBP25.69■■□□□ 1.7
AP3D1-209ENST00000591284 MMP10P09238 476 aa25.69■■□□□ 1.7
AP3D1-209ENST00000591284 CNGB1Q14028 1251 aaPredicted RBP25.69■■□□□ 1.7
AP3D1-209ENST00000591284 SLC4A9Q96Q91 983 aa25.68■■□□□ 1.7
AP3D1-209ENST00000591284 RNMTO43148 476 aaKnown RBP25.67■■□□□ 1.7
AP3D1-209ENST00000591284 SMIM5Q71RC9 77 aa25.67■■□□□ 1.7
AP3D1-209ENST00000591284 ARHGEF1Q92888 912 aaKnown RBP25.67■■□□□ 1.7
AP3D1-209ENST00000591284 NUDCQ9Y266 331 aa25.67■■□□□ 1.7
AP3D1-209ENST00000591284 YBX3P16989 372 aaKnown RBP eCLIP25.66■■□□□ 1.7
AP3D1-209ENST00000591284 CRKLP46109 303 aaKnown RBP25.66■■□□□ 1.7
AP3D1-209ENST00000591284 GAS2L2Q8NHY3 880 aa25.66■■□□□ 1.7
AP3D1-209ENST00000591284 MTHFSDQ2M296 383 aaKnown RBP25.65■■□□□ 1.7
AP3D1-209ENST00000591284 CCDC87Q9NVE4 849 aa25.65■■□□□ 1.7
AP3D1-209ENST00000591284 PARP3Q9Y6F1 533 aa25.65■■□□□ 1.7
AP3D1-209ENST00000591284 CICQ96RK0 1608 aaPredicted RBP25.63■■□□□ 1.69
AP3D1-209ENST00000591284 VIRMAQ69YN4 1812 aaKnown RBP25.63■■□□□ 1.69
AP3D1-209ENST00000591284 TTC5Q8N0Z6 440 aa25.63■■□□□ 1.69
AP3D1-209ENST00000591284 LGR6Q9HBX8 967 aa25.63■■□□□ 1.69
AP3D1-209ENST00000591284 MRC1P22897 1456 aa25.62■■□□□ 1.69
AP3D1-209ENST00000591284 TGFB2P61812 414 aa25.62■■□□□ 1.69
AP3D1-209ENST00000591284 MYH14Q7Z406 1995 aaKnown RBP25.62■■□□□ 1.69
AP3D1-209ENST00000591284 GYS1P13807 737 aa25.61■■□□□ 1.69
AP3D1-209ENST00000591284 TEFQ10587 303 aa25.61■■□□□ 1.69
AP3D1-209ENST00000591284 VSIG10Q8N0Z9 540 aa25.61■■□□□ 1.69
AP3D1-209ENST00000591284 GNAT3A8MTJ3 354 aa25.6■■□□□ 1.69
AP3D1-209ENST00000591284 ZPR1O75312 459 aa25.6■■□□□ 1.69
AP3D1-209ENST00000591284 COL3A1P02461 1466 aaPredicted RBP25.58■■□□□ 1.69
AP3D1-209ENST00000591284 TJP1Q07157 1748 aa25.57■■□□□ 1.68
AP3D1-209ENST00000591284 GIGYF1O75420 1035 aaPredicted RBP25.57■■□□□ 1.68
AP3D1-209ENST00000591284 C4AP0C0L4 1744 aa25.57■■□□□ 1.68
AP3D1-209ENST00000591284 ADAMTS7Q9UKP4 1686 aa25.56■■□□□ 1.68
AP3D1-209ENST00000591284 STARD3NLO95772 234 aa25.56■■□□□ 1.68
AP3D1-209ENST00000591284 DNAJC10Q8IXB1 793 aa25.56■■□□□ 1.68
AP3D1-209ENST00000591284 TEX13AQ9BXU3 409 aaPredicted RBP25.56■■□□□ 1.68
AP3D1-209ENST00000591284 USP42Q9H9J4 1324 aaKnown RBP25.56■■□□□ 1.68
AP3D1-209ENST00000591284 KIF13BQ9NQT8 1826 aa25.56■■□□□ 1.68
AP3D1-209ENST00000591284 UTRNP46939 3433 aa25.55■■□□□ 1.68
AP3D1-209ENST00000591284 SLC39A6Q13433 755 aa25.55■■□□□ 1.68
AP3D1-209ENST00000591284 NEFMP07197 916 aa25.54■■□□□ 1.68
AP3D1-209ENST00000591284 INTS5Q6P9B9 1019 aaKnown RBP25.54■■□□□ 1.68
AP3D1-209ENST00000591284 CYP19A1P11511 503 aaPredicted RBP25.53■■□□□ 1.68
AP3D1-209ENST00000591284 NPM2Q86SE8 214 aaKnown RBP25.53■■□□□ 1.68
AP3D1-209ENST00000591284 C10orf71Q711Q0 1435 aa25.53■■□□□ 1.68
AP3D1-209ENST00000591284 U2AF1L5P0DN76 240 aaPredicted RBP25.52■■□□□ 1.68
AP3D1-209ENST00000591284 PRKAR2BP31323 418 aa25.52■■□□□ 1.68
AP3D1-209ENST00000591284 U2AF1Q01081 240 aaKnown RBP eCLIP25.52■■□□□ 1.68
AP3D1-209ENST00000591284 PPP2R1AP30153 589 aa25.51■■□□□ 1.67
AP3D1-209ENST00000591284 C1QTNF8P60827 252 aa25.51■■□□□ 1.67
AP3D1-209ENST00000591284 RTF1Q92541 710 aaKnown RBP25.51■■□□□ 1.67
AP3D1-209ENST00000591284 A0A087WZG4 1122 aa25.5■■□□□ 1.67
AP3D1-209ENST00000591284 PXDNLA1KZ92 1463 aa25.5■■□□□ 1.67
AP3D1-209ENST00000591284 FCHSD2O94868 740 aa25.5■■□□□ 1.67
AP3D1-209ENST00000591284 SOS1Q07889 1333 aaPredicted RBP25.5■■□□□ 1.67
AP3D1-209ENST00000591284 WWC3Q9ULE0 1092 aa25.5■■□□□ 1.67
AP3D1-209ENST00000591284 BCS1LQ9Y276 419 aa25.5■■□□□ 1.67
AP3D1-209ENST00000591284 KCPQ6ZWJ8 1503 aa25.49■■□□□ 1.67
AP3D1-209ENST00000591284 FKBP8Q14318 412 aa25.49■■□□□ 1.67
AP3D1-209ENST00000591284 ZNF790Q6PG37 636 aa25.49■■□□□ 1.67
AP3D1-209ENST00000591284 GPBP1L1Q9HC44 474 aaPredicted RBP25.49■■□□□ 1.67
AP3D1-209ENST00000591284 SRP68Q9UHB9 627 aaKnown RBP25.49■■□□□ 1.67
AP3D1-209ENST00000591284 NARFQ9UHQ1 456 aa25.49■■□□□ 1.67
AP3D1-209ENST00000591284 COL15A1P39059 1388 aa25.48■■□□□ 1.67
AP3D1-209ENST00000591284 A0A0G2JLW4 131 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms