RNA–Protein interactions for RNA: ENST00000590959.5

SPHK1-207, Transcript of sphingosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPHK1, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-207ENST00000590959 C8orf58Q8NAV2 365 aa24.86■■□□□ 1.57
SPHK1-207ENST00000590959 BCL11AQ9H165 835 aa24.86■■□□□ 1.57
SPHK1-207ENST00000590959 TSPYL4Q9UJ04 414 aa24.86■■□□□ 1.57
SPHK1-207ENST00000590959 OVOS2A0A0G2JMS6 1433 aa24.86■■□□□ 1.57
SPHK1-207ENST00000590959 CEMIPQ8WUJ3 1361 aa24.85■■□□□ 1.57
SPHK1-207ENST00000590959 ELL2O00472 640 aaPredicted RBP24.85■■□□□ 1.57
SPHK1-207ENST00000590959 ZKSCAN2Q63HK3 967 aa24.85■■□□□ 1.57
SPHK1-207ENST00000590959 BABAM1Q9NWV8 329 aa24.85■■□□□ 1.57
SPHK1-207ENST00000590959 WNK3Q9BYP7 1800 aa24.85■■□□□ 1.57
SPHK1-207ENST00000590959 TCERG1O14776 1098 aaKnown RBP24.84■■□□□ 1.57
SPHK1-207ENST00000590959 KIF16BQ96L93 1317 aa24.84■■□□□ 1.57
SPHK1-207ENST00000590959 PARP4Q9UKK3 1724 aaKnown RBP24.83■■□□□ 1.57
SPHK1-207ENST00000590959 POTEAQ6S8J7 498 aa24.83■■□□□ 1.57
SPHK1-207ENST00000590959 BRPF1P55201 1214 aaPredicted RBP24.83■■□□□ 1.56
SPHK1-207ENST00000590959 TAF7Q15545 349 aaPredicted RBP24.83■■□□□ 1.56
SPHK1-207ENST00000590959 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.83■■□□□ 1.56
SPHK1-207ENST00000590959 MIS18AQ9NYP9 233 aa24.83■■□□□ 1.56
SPHK1-207ENST00000590959 MS4A1P11836 297 aa24.82■■□□□ 1.56
SPHK1-207ENST00000590959 IPO9Q96P70 1041 aaKnown RBP24.82■■□□□ 1.56
SPHK1-207ENST00000590959 ZCRB1Q8TBF4 217 aaKnown RBP24.81■■□□□ 1.56
SPHK1-207ENST00000590959 SPG7Q9UQ90 795 aa24.81■■□□□ 1.56
SPHK1-207ENST00000590959 PKD1L3Q7Z443 1732 aa24.81■■□□□ 1.56
SPHK1-207ENST00000590959 CYP27B1O15528 508 aa24.81■■□□□ 1.56
SPHK1-207ENST00000590959 SHANK3Q9BYB0 1731 aa24.8■■□□□ 1.56
SPHK1-207ENST00000590959 IPO8O15397 1037 aaKnown RBP24.8■■□□□ 1.56
SPHK1-207ENST00000590959 PANK1Q8TE04 598 aa24.8■■□□□ 1.56
SPHK1-207ENST00000590959 LGR6Q9HBX8 967 aa24.79■■□□□ 1.56
SPHK1-207ENST00000590959 NOB1Q9ULX3 412 aaKnown RBP24.79■■□□□ 1.56
SPHK1-207ENST00000590959 ONECUT3O60422 494 aaPredicted RBP24.79■■□□□ 1.56
SPHK1-207ENST00000590959 ATF7IPQ6VMQ6 1270 aa24.79■■□□□ 1.56
SPHK1-207ENST00000590959 DDX54Q8TDD1 881 aaKnown RBP24.79■■□□□ 1.56
SPHK1-207ENST00000590959 MPRIPQ6WCQ1 1025 aa24.78■■□□□ 1.56
SPHK1-207ENST00000590959 A0A0G2JS52 829 aa24.77■■□□□ 1.56
SPHK1-207ENST00000590959 EXOC5O00471 708 aa24.77■■□□□ 1.56
SPHK1-207ENST00000590959 KRT24Q2M2I5 525 aa24.77■■□□□ 1.56
SPHK1-207ENST00000590959 FTSJ3Q8IY81 847 aaKnown RBP24.77■■□□□ 1.56
SPHK1-207ENST00000590959 DZIP1LQ8IYY4 767 aaKnown RBP24.77■■□□□ 1.56
SPHK1-207ENST00000590959 CDCA7Q9BWT1 371 aaPredicted RBP24.77■■□□□ 1.56
SPHK1-207ENST00000590959 COG6Q9Y2V7 657 aa24.77■■□□□ 1.56
SPHK1-207ENST00000590959 RNMTO43148 476 aaKnown RBP24.77■■□□□ 1.56
SPHK1-207ENST00000590959 TEFQ10587 303 aa24.77■■□□□ 1.56
SPHK1-207ENST00000590959 DDB1Q16531 1140 aa24.77■■□□□ 1.56
SPHK1-207ENST00000590959 MRPL50Q8N5N7 158 aaKnown RBP24.77■■□□□ 1.56
SPHK1-207ENST00000590959 THSD7AQ9UPZ6 1657 aa24.76■■□□□ 1.55
SPHK1-207ENST00000590959 RLBP1P12271 317 aa24.76■■□□□ 1.55
SPHK1-207ENST00000590959 TRIM27P14373 513 aa24.76■■□□□ 1.55
SPHK1-207ENST00000590959 PHKG2P15735 406 aa24.76■■□□□ 1.55
SPHK1-207ENST00000590959 RBM6P78332 1123 aaKnown RBP24.76■■□□□ 1.55
SPHK1-207ENST00000590959 CLUAP1Q96AJ1 413 aa24.76■■□□□ 1.55
SPHK1-207ENST00000590959 TNNQ9UQP3 1299 aa24.75■■□□□ 1.55
SPHK1-207ENST00000590959 EP400Q96L91 3159 aa24.75■■□□□ 1.55
SPHK1-207ENST00000590959 SEPT12Q8IYM1 358 aa24.75■■□□□ 1.55
SPHK1-207ENST00000590959 TNS2Q63HR2 1409 aa24.74■■□□□ 1.55
SPHK1-207ENST00000590959 ARHGAP45Q92619 1136 aa24.74■■□□□ 1.55
SPHK1-207ENST00000590959 PCDH11XQ9BZA7 1347 aa24.73■■□□□ 1.55
SPHK1-207ENST00000590959 PCDH11YQ9BZA8 1340 aa24.73■■□□□ 1.55
SPHK1-207ENST00000590959 RXRBP28702 533 aa24.73■■□□□ 1.55
SPHK1-207ENST00000590959 IFNL2Q8IZJ0 200 aa24.73■■□□□ 1.55
SPHK1-207ENST00000590959 SOS1Q07889 1333 aaPredicted RBP24.73■■□□□ 1.55
SPHK1-207ENST00000590959 AAMPQ13685 434 aa24.72■■□□□ 1.55
SPHK1-207ENST00000590959 MARCH10Q8NA82 808 aaPredicted RBP24.72■■□□□ 1.55
SPHK1-207ENST00000590959 ZBTB47Q9UFB7 747 aaPredicted RBP24.71■■□□□ 1.55
SPHK1-207ENST00000590959 MVPQ14764 893 aaKnown RBP24.7■■□□□ 1.55
SPHK1-207ENST00000590959 FAM182BQ5T319 152 aa24.7■■□□□ 1.55
SPHK1-207ENST00000590959 BTBD11A6QL63 1104 aa24.7■■□□□ 1.54
SPHK1-207ENST00000590959 ADAMTS7Q9UKP4 1686 aa24.7■■□□□ 1.54
SPHK1-207ENST00000590959 KDM6AO15550 1401 aaPredicted RBP24.69■■□□□ 1.54
SPHK1-207ENST00000590959 HSP90AB1P08238 724 aaKnown RBP24.68■■□□□ 1.54
SPHK1-207ENST00000590959 VIRMAQ69YN4 1812 aaKnown RBP24.68■■□□□ 1.54
SPHK1-207ENST00000590959 NKX1-1Q15270 411 aaPredicted RBP24.67■■□□□ 1.54
SPHK1-207ENST00000590959 DCAF5Q96JK2 942 aa24.67■■□□□ 1.54
SPHK1-207ENST00000590959 BRWD3Q6RI45 1802 aa24.67■■□□□ 1.54
SPHK1-207ENST00000590959 EIF4A1P60842 406 aaKnown RBP24.66■■□□□ 1.54
SPHK1-207ENST00000590959 API5Q9BZZ5 524 aaKnown RBP24.66■■□□□ 1.54
SPHK1-207ENST00000590959 ITPRIPQ8IWB1 547 aa24.65■■□□□ 1.54
SPHK1-207ENST00000590959 DDX19BQ9UMR2 479 aa24.65■■□□□ 1.54
SPHK1-207ENST00000590959 KAT6BQ8WYB5 2073 aa24.65■■□□□ 1.54
SPHK1-207ENST00000590959 KDM3BQ7LBC6 1761 aa24.65■■□□□ 1.54
SPHK1-207ENST00000590959 RGS12O14924 1447 aa24.65■■□□□ 1.54
SPHK1-207ENST00000590959 CCDC30Q5VVM6 783 aa24.64■■□□□ 1.53
SPHK1-207ENST00000590959 TMEM57Q8N5G2 664 aa24.64■■□□□ 1.53
SPHK1-207ENST00000590959 SLC52A2Q9HAB3 445 aa24.64■■□□□ 1.53
SPHK1-207ENST00000590959 SCN11AQ9UI33 1791 aa24.63■■□□□ 1.53
SPHK1-207ENST00000590959 HOXB7P09629 217 aa24.63■■□□□ 1.53
SPHK1-207ENST00000590959 STK31Q9BXU1 1019 aa24.63■■□□□ 1.53
SPHK1-207ENST00000590959 SLC4A2P04920 1241 aa24.62■■□□□ 1.53
SPHK1-207ENST00000590959 PTPRCP08575 1304 aa24.62■■□□□ 1.53
SPHK1-207ENST00000590959 CHMP4AQ9BY43 222 aa24.62■■□□□ 1.53
SPHK1-207ENST00000590959 TOGARAM1Q9Y4F4 1720 aa24.62■■□□□ 1.53
SPHK1-207ENST00000590959 ABCC4O15439 1325 aa24.61■■□□□ 1.53
SPHK1-207ENST00000590959 SIPA1L3O60292 1781 aaPredicted RBP24.6■■□□□ 1.53
SPHK1-207ENST00000590959 KCNQ3O43525 872 aa24.6■■□□□ 1.53
SPHK1-207ENST00000590959 CENPQQ7L2Z9 268 aaPredicted RBP24.6■■□□□ 1.53
SPHK1-207ENST00000590959 KRT27Q7Z3Y8 459 aa24.6■■□□□ 1.53
SPHK1-207ENST00000590959 NFATC2IPQ8NCF5 419 aa24.6■■□□□ 1.53
SPHK1-207ENST00000590959 ACSBG1Q96GR2 724 aa24.6■■□□□ 1.53
SPHK1-207ENST00000590959 MRC1P22897 1456 aa24.59■■□□□ 1.53
SPHK1-207ENST00000590959 KDM2BQ8NHM5 1336 aa24.58■■□□□ 1.53
SPHK1-207ENST00000590959 RTL5Q5HYW3 569 aaPredicted RBP24.58■■□□□ 1.53
SPHK1-207ENST00000590959 HDGFL1Q5TGJ6 251 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms