RNA–Protein interactions for RNA: ENST00000590683.2

AP3D1-208, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 5

Gene AP3D1, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-208ENST00000590683 MPRIPQ6WCQ1 1025 aa12.62□□□□□ -0.39
AP3D1-208ENST00000590683 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.62□□□□□ -0.39
AP3D1-208ENST00000590683 PIM2Q9P1W9 311 aa12.62□□□□□ -0.39
AP3D1-208ENST00000590683 USP31Q70CQ4 1352 aa12.61□□□□□ -0.39
AP3D1-208ENST00000590683 GNPATO15228 680 aa12.61□□□□□ -0.39
AP3D1-208ENST00000590683 HMGB2P26583 209 aaKnown RBP12.61□□□□□ -0.39
AP3D1-208ENST00000590683 DALRD3Q5D0E6 543 aaKnown RBP12.61□□□□□ -0.39
AP3D1-208ENST00000590683 NME9Q86XW9 330 aa12.61□□□□□ -0.39
AP3D1-208ENST00000590683 CCDC87Q9NVE4 849 aa12.61□□□□□ -0.39
AP3D1-208ENST00000590683 KDM6AO15550 1401 aaPredicted RBP12.61□□□□□ -0.39
AP3D1-208ENST00000590683 STAC3Q96MF2 364 aa12.6□□□□□ -0.39
AP3D1-208ENST00000590683 CFAP44Q96MT7 982 aa12.6□□□□□ -0.39
AP3D1-208ENST00000590683 ZC3H4Q9UPT8 1303 aaKnown RBP12.59□□□□□ -0.39
AP3D1-208ENST00000590683 POTEIP0CG38 1075 aa12.58□□□□□ -0.4
AP3D1-208ENST00000590683 POTEJP0CG39 1038 aa12.58□□□□□ -0.4
AP3D1-208ENST00000590683 IP6K1Q92551 441 aa12.58□□□□□ -0.4
AP3D1-208ENST00000590683 CHRNA5P30532 468 aa12.57□□□□□ -0.4
AP3D1-208ENST00000590683 TMF1P82094 1093 aa12.57□□□□□ -0.4
AP3D1-208ENST00000590683 ITPK1Q13572 414 aa12.57□□□□□ -0.4
AP3D1-208ENST00000590683 CHADLQ6NUI6 762 aa12.57□□□□□ -0.4
AP3D1-208ENST00000590683 SMARCC1Q92922 1105 aaPredicted RBP12.57□□□□□ -0.4
AP3D1-208ENST00000590683 NLGN1Q8N2Q7 840 aa12.56□□□□□ -0.4
AP3D1-208ENST00000590683 PARP3Q9Y6F1 533 aa12.56□□□□□ -0.4
AP3D1-208ENST00000590683 EVC2Q86UK5 1308 aa12.56□□□□□ -0.4
AP3D1-208ENST00000590683 DICER1Q9UPY3 1922 aaKnown RBP12.55□□□□□ -0.4
AP3D1-208ENST00000590683 LOC102724428A0A0B4J2F2 783 aa12.55□□□□□ -0.4
AP3D1-208ENST00000590683 LMNB1P20700 586 aa12.55□□□□□ -0.4
AP3D1-208ENST00000590683 SIK1P57059 783 aa12.55□□□□□ -0.4
AP3D1-208ENST00000590683 USHBP1Q8N6Y0 703 aa12.55□□□□□ -0.4
AP3D1-208ENST00000590683 GYS1P13807 737 aa12.54□□□□□ -0.4
AP3D1-208ENST00000590683 PIGBQ92521 554 aa12.54□□□□□ -0.4
AP3D1-208ENST00000590683 PASKQ96RG2 1323 aa12.54□□□□□ -0.4
AP3D1-208ENST00000590683 SBNO2Q9Y2G9 1366 aa12.54□□□□□ -0.4
AP3D1-208ENST00000590683 TRAPPC3LQ5T215 181 aa12.53□□□□□ -0.4
AP3D1-208ENST00000590683 PIAS4Q8N2W9 510 aaPredicted RBP12.53□□□□□ -0.4
AP3D1-208ENST00000590683 CASP8AP2Q9UKL3 1982 aa12.52□□□□□ -0.4
AP3D1-208ENST00000590683 DLEC1Q9Y238 1755 aa12.52□□□□□ -0.41
AP3D1-208ENST00000590683 ATP6V1AP38606 617 aa12.52□□□□□ -0.41
AP3D1-208ENST00000590683 PCDH11XQ9BZA7 1347 aa12.52□□□□□ -0.41
AP3D1-208ENST00000590683 PCDH11YQ9BZA8 1340 aa12.52□□□□□ -0.41
AP3D1-208ENST00000590683 CD163L1Q9NR16 1453 aa12.52□□□□□ -0.41
AP3D1-208ENST00000590683 COL5A3P25940 1745 aaPredicted RBP12.51□□□□□ -0.41
AP3D1-208ENST00000590683 TMEM88BA6NKF7 163 aa12.51□□□□□ -0.41
AP3D1-208ENST00000590683 HOXC9P31274 260 aa12.51□□□□□ -0.41
AP3D1-208ENST00000590683 NBPF6Q5VWK0 638 aa12.51□□□□□ -0.41
AP3D1-208ENST00000590683 ARHGEF1Q92888 912 aaKnown RBP12.51□□□□□ -0.41
AP3D1-208ENST00000590683 NBPF4Q96M43 638 aa12.51□□□□□ -0.41
AP3D1-208ENST00000590683 MYH14Q7Z406 1995 aaKnown RBP12.5□□□□□ -0.41
AP3D1-208ENST00000590683 CYP27B1O15528 508 aa12.5□□□□□ -0.41
AP3D1-208ENST00000590683 FBLN1P23142 703 aa12.5□□□□□ -0.41
AP3D1-208ENST00000590683 MAP2K1Q02750 393 aaPredicted RBP12.5□□□□□ -0.41
AP3D1-208ENST00000590683 PPP4R3CPQ6ZMV5 832 aa12.5□□□□□ -0.41
AP3D1-208ENST00000590683 RAPGEF4Q8WZA2 1011 aa12.5□□□□□ -0.41
AP3D1-208ENST00000590683 ASAP1Q9ULH1 1129 aa12.5□□□□□ -0.41
AP3D1-208ENST00000590683 RTCBQ9Y3I0 505 aaKnown RBP12.5□□□□□ -0.41
AP3D1-208ENST00000590683 CGNL1Q0VF96 1302 aa12.5□□□□□ -0.41
AP3D1-208ENST00000590683 THSD7BQ9C0I4 1608 aa12.5□□□□□ -0.41
AP3D1-208ENST00000590683 AFDNP55196 1824 aaKnown RBP12.49□□□□□ -0.41
AP3D1-208ENST00000590683 MAP3K19Q56UN5 1328 aa12.49□□□□□ -0.41
AP3D1-208ENST00000590683 WDR33Q9C0J8 1336 aaKnown RBP12.49□□□□□ -0.41
AP3D1-208ENST00000590683 DDR1Q08345 913 aa12.49□□□□□ -0.41
AP3D1-208ENST00000590683 DPY19L2Q6NUT2 758 aa12.49□□□□□ -0.41
AP3D1-208ENST00000590683 MCOLN1Q9GZU1 580 aa12.49□□□□□ -0.41
AP3D1-208ENST00000590683 TSKSQ9UJT2 592 aa12.49□□□□□ -0.41
AP3D1-208ENST00000590683 LTBP1Q14766 1721 aa12.48□□□□□ -0.41
AP3D1-208ENST00000590683 NFKBIEO00221 500 aa12.48□□□□□ -0.41
AP3D1-208ENST00000590683 TATP17735 454 aaPredicted RBP12.48□□□□□ -0.41
AP3D1-208ENST00000590683 RASSF10A6NK89 507 aa12.47□□□□□ -0.41
AP3D1-208ENST00000590683 RFC4P35249 363 aa12.47□□□□□ -0.41
AP3D1-208ENST00000590683 AMPHP49418 695 aa12.47□□□□□ -0.41
AP3D1-208ENST00000590683 DEFB115Q30KQ5 88 aa12.47□□□□□ -0.41
AP3D1-208ENST00000590683 FER1L6Q2WGJ9 1857 aa12.46□□□□□ -0.41
AP3D1-208ENST00000590683 SCN4AP35499 1836 aa12.46□□□□□ -0.41
AP3D1-208ENST00000590683 ITGBL1O95965 494 aaPredicted RBP12.46□□□□□ -0.41
AP3D1-208ENST00000590683 PRPF38BQ5VTL8 546 aaKnown RBP12.46□□□□□ -0.41
AP3D1-208ENST00000590683 DDNO94850 711 aaPredicted RBP12.45□□□□□ -0.42
AP3D1-208ENST00000590683 FKBP8Q14318 412 aa12.45□□□□□ -0.42
AP3D1-208ENST00000590683 SRP68Q9UHB9 627 aaKnown RBP12.45□□□□□ -0.42
AP3D1-208ENST00000590683 EDC4Q6P2E9 1401 aaKnown RBP12.45□□□□□ -0.42
AP3D1-208ENST00000590683 ZNF831Q5JPB2 1677 aa12.45□□□□□ -0.42
AP3D1-208ENST00000590683 KDRP35968 1356 aa12.44□□□□□ -0.42
AP3D1-208ENST00000590683 ADAMTSL1Q8N6G6 1762 aa12.44□□□□□ -0.42
AP3D1-208ENST00000590683 LDHDQ86WU2 507 aa12.44□□□□□ -0.42
AP3D1-208ENST00000590683 SLC4A9Q96Q91 983 aa12.44□□□□□ -0.42
AP3D1-208ENST00000590683 SOX10P56693 466 aa12.43□□□□□ -0.42
AP3D1-208ENST00000590683 ERFEQ4G0M1 354 aa12.43□□□□□ -0.42
AP3D1-208ENST00000590683 ATG3Q9NT62 314 aa12.43□□□□□ -0.42
AP3D1-208ENST00000590683 TMOD3Q9NYL9 352 aa12.43□□□□□ -0.42
AP3D1-208ENST00000590683 POLRMTO00411 1230 aaKnown RBP12.42□□□□□ -0.42
AP3D1-208ENST00000590683 RPS6KA4O75676 772 aa12.42□□□□□ -0.42
AP3D1-208ENST00000590683 BEGAINQ9BUH8 593 aa12.42□□□□□ -0.42
AP3D1-208ENST00000590683 ABT1Q9ULW3 272 aaKnown RBP12.42□□□□□ -0.42
AP3D1-208ENST00000590683 CACNA1SQ13698 1873 aa12.42□□□□□ -0.42
AP3D1-208ENST00000590683 GRM1Q13255 1194 aa12.41□□□□□ -0.42
AP3D1-208ENST00000590683 DGKZQ13574 1117 aa12.41□□□□□ -0.42
AP3D1-208ENST00000590683 NKX1-1Q15270 411 aaPredicted RBP12.41□□□□□ -0.42
AP3D1-208ENST00000590683 TMC1Q8TDI8 760 aa12.41□□□□□ -0.42
AP3D1-208ENST00000590683 TAF1DQ9H5J8 278 aaPredicted RBP12.41□□□□□ -0.42
AP3D1-208ENST00000590683 NRXN2Q9P2S2 1712 aa12.41□□□□□ -0.42
AP3D1-208ENST00000590683 ADAMTS7Q9UKP4 1686 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms