RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 RREB1Q92766 1687 aa16.89■□□□□ 0.29
DDX39A-213ENST00000590315 ERVV-2B6SEH9 535 aa16.89■□□□□ 0.29
DDX39A-213ENST00000590315 THUMPD2Q9BTF0 503 aaKnown RBP16.88■□□□□ 0.29
DDX39A-213ENST00000590315 SLC52A2Q9HAB3 445 aa16.88■□□□□ 0.29
DDX39A-213ENST00000590315 TAF1LQ8IZX4 1826 aa16.88■□□□□ 0.29
DDX39A-213ENST00000590315 NUP188Q5SRE5 1749 aa16.87■□□□□ 0.29
DDX39A-213ENST00000590315 UBR2Q8IWV8 1755 aa16.87■□□□□ 0.29
DDX39A-213ENST00000590315 HTATSF1O43719 755 aaKnown RBP16.87■□□□□ 0.29
DDX39A-213ENST00000590315 CCDC125Q86Z20 511 aa16.87■□□□□ 0.29
DDX39A-213ENST00000590315 NFATC2IPQ8NCF5 419 aa16.87■□□□□ 0.29
DDX39A-213ENST00000590315 IL17REQ8NFR9 667 aa16.87■□□□□ 0.29
DDX39A-213ENST00000590315 PIGBQ92521 554 aa16.87■□□□□ 0.29
DDX39A-213ENST00000590315 C5P01031 1676 aa16.87■□□□□ 0.29
DDX39A-213ENST00000590315 DEFB132Q7Z7B7 95 aa16.86■□□□□ 0.29
DDX39A-213ENST00000590315 LAS1LQ9Y4W2 734 aaKnown RBP16.86■□□□□ 0.29
DDX39A-213ENST00000590315 EN1Q05925 392 aaPredicted RBP16.85■□□□□ 0.29
DDX39A-213ENST00000590315 CEMIPQ8WUJ3 1361 aa16.85■□□□□ 0.29
DDX39A-213ENST00000590315 SOCS7O14512 581 aa16.84■□□□□ 0.29
DDX39A-213ENST00000590315 TTC5Q8N0Z6 440 aa16.84■□□□□ 0.29
DDX39A-213ENST00000590315 PALLDQ8WX93 1383 aa16.84■□□□□ 0.29
DDX39A-213ENST00000590315 BTBD11A6QL63 1104 aa16.83■□□□□ 0.28
DDX39A-213ENST00000590315 TJP1Q07157 1748 aa16.83■□□□□ 0.28
DDX39A-213ENST00000590315 SLC39A6Q13433 755 aa16.83■□□□□ 0.28
DDX39A-213ENST00000590315 SMARCC1Q92922 1105 aaPredicted RBP16.83■□□□□ 0.28
DDX39A-213ENST00000590315 RBM42Q9BTD8 480 aaKnown RBP16.83■□□□□ 0.28
DDX39A-213ENST00000590315 ASAP1Q9ULH1 1129 aa16.83■□□□□ 0.28
DDX39A-213ENST00000590315 TRIM35Q9UPQ4 493 aa16.83■□□□□ 0.28
DDX39A-213ENST00000590315 LAMB4A4D0S4 1761 aa16.82■□□□□ 0.28
DDX39A-213ENST00000590315 EZH2Q15910 746 aaKnown RBP16.82■□□□□ 0.28
DDX39A-213ENST00000590315 COL5A3P25940 1745 aaPredicted RBP16.82■□□□□ 0.28
DDX39A-213ENST00000590315 ATG3Q9NT62 314 aa16.81■□□□□ 0.28
DDX39A-213ENST00000590315 PTCD1O75127 700 aaKnown RBP16.8■□□□□ 0.28
DDX39A-213ENST00000590315 HNRNPUQ00839 825 aaKnown RBP eCLIP16.8■□□□□ 0.28
DDX39A-213ENST00000590315 CALD1Q05682 793 aaKnown RBP16.8■□□□□ 0.28
DDX39A-213ENST00000590315 TAF7Q15545 349 aaPredicted RBP16.8■□□□□ 0.28
DDX39A-213ENST00000590315 MIS18AQ9NYP9 233 aa16.8■□□□□ 0.28
DDX39A-213ENST00000590315 CCNL1Q9UK58 526 aaPredicted RBP16.8■□□□□ 0.28
DDX39A-213ENST00000590315 TUBGCP6Q96RT7 1819 aa16.8■□□□□ 0.28
DDX39A-213ENST00000590315 ZNF831Q5JPB2 1677 aa16.79■□□□□ 0.28
DDX39A-213ENST00000590315 TSPYL4Q9UJ04 414 aa16.79■□□□□ 0.28
DDX39A-213ENST00000590315 KCPQ6ZWJ8 1503 aa16.79■□□□□ 0.28
DDX39A-213ENST00000590315 PLSCR1O15162 318 aa16.78■□□□□ 0.28
DDX39A-213ENST00000590315 KCNQ4P56696 695 aa16.78■□□□□ 0.28
DDX39A-213ENST00000590315 TXNRD1Q16881 649 aa16.78■□□□□ 0.28
DDX39A-213ENST00000590315 C4BP0C0L5 1744 aa16.78■□□□□ 0.28
DDX39A-213ENST00000590315 WWC1Q8IX03 1113 aa16.77■□□□□ 0.28
DDX39A-213ENST00000590315 LOC102724428A0A0B4J2F2 783 aa16.76■□□□□ 0.27
DDX39A-213ENST00000590315 ATP6V1AP38606 617 aa16.76■□□□□ 0.27
DDX39A-213ENST00000590315 SIK1P57059 783 aa16.76■□□□□ 0.27
DDX39A-213ENST00000590315 CCDC27Q2M243 656 aa16.76■□□□□ 0.27
DDX39A-213ENST00000590315 ZNF790Q6PG37 636 aa16.76■□□□□ 0.27
DDX39A-213ENST00000590315 NGEFQ8N5V2 710 aa16.76■□□□□ 0.27
DDX39A-213ENST00000590315 CAMKK2Q96RR4 588 aa16.76■□□□□ 0.27
DDX39A-213ENST00000590315 CICQ96RK0 1608 aaPredicted RBP16.76■□□□□ 0.27
DDX39A-213ENST00000590315 KCNQ3O43525 872 aa16.75■□□□□ 0.27
DDX39A-213ENST00000590315 GNAI1P63096 354 aa16.75■□□□□ 0.27
DDX39A-213ENST00000590315 FMNL2Q96PY5 1086 aa16.75■□□□□ 0.27
DDX39A-213ENST00000590315 SLC27A3Q5K4L6 730 aa16.74■□□□□ 0.27
DDX39A-213ENST00000590315 UBR3Q6ZT12 1888 aa16.73■□□□□ 0.27
DDX39A-213ENST00000590315 YTHDC1Q96MU7 727 aaKnown RBP16.73■□□□□ 0.27
DDX39A-213ENST00000590315 IFT57Q9NWB7 429 aa16.73■□□□□ 0.27
DDX39A-213ENST00000590315 MYH14Q7Z406 1995 aaKnown RBP16.73■□□□□ 0.27
DDX39A-213ENST00000590315 QSER1Q2KHR3 1735 aa16.73■□□□□ 0.27
DDX39A-213ENST00000590315 ZNF496Q96IT1 587 aaPredicted RBP16.72■□□□□ 0.27
DDX39A-213ENST00000590315 CFAP44Q96MT7 982 aa16.72■□□□□ 0.27
DDX39A-213ENST00000590315 HEG1Q9ULI3 1381 aa16.72■□□□□ 0.27
DDX39A-213ENST00000590315 NCBP3Q53F19 620 aaKnown RBP16.71■□□□□ 0.27
DDX39A-213ENST00000590315 NBPF14Q5TI25 921 aa16.71■□□□□ 0.27
DDX39A-213ENST00000590315 WDR63Q8IWG1 891 aa16.71■□□□□ 0.27
DDX39A-213ENST00000590315 TSR2Q969E8 191 aaKnown RBP16.71■□□□□ 0.27
DDX39A-213ENST00000590315 MBIPQ9NS73 344 aa16.71■□□□□ 0.27
DDX39A-213ENST00000590315 LRRC4BQ9NT99 713 aa16.71■□□□□ 0.27
DDX39A-213ENST00000590315 ITPK1Q13572 414 aa16.7■□□□□ 0.26
DDX39A-213ENST00000590315 DNAJC10Q8IXB1 793 aa16.7■□□□□ 0.26
DDX39A-213ENST00000590315 PROM2Q8N271 834 aa16.7■□□□□ 0.26
DDX39A-213ENST00000590315 AK7Q96M32 723 aa16.7■□□□□ 0.26
DDX39A-213ENST00000590315 BABAM1Q9NWV8 329 aa16.7■□□□□ 0.26
DDX39A-213ENST00000590315 STK32BQ9NY57 414 aa16.7■□□□□ 0.26
DDX39A-213ENST00000590315 IL16Q14005 1332 aa16.7■□□□□ 0.26
DDX39A-213ENST00000590315 CHL1O00533 1208 aa16.69■□□□□ 0.26
DDX39A-213ENST00000590315 GOLGA2Q08379 1002 aa16.69■□□□□ 0.26
DDX39A-213ENST00000590315 LINC00116Q8NCU8 138 aa16.69■□□□□ 0.26
DDX39A-213ENST00000590315 SLC4A9Q96Q91 983 aa16.69■□□□□ 0.26
DDX39A-213ENST00000590315 C4AP0C0L4 1744 aa16.68■□□□□ 0.26
DDX39A-213ENST00000590315 HMGB2P26583 209 aaKnown RBP16.68■□□□□ 0.26
DDX39A-213ENST00000590315 EIF4A1P60842 406 aaKnown RBP16.68■□□□□ 0.26
DDX39A-213ENST00000590315 MYH16Q9H6N6 1097 aa16.68■□□□□ 0.26
DDX39A-213ENST00000590315 SNRPA1P09661 255 aaKnown RBP16.67■□□□□ 0.26
DDX39A-213ENST00000590315 VSIG10Q8N0Z9 540 aa16.67■□□□□ 0.26
DDX39A-213ENST00000590315 FANCIQ9NVI1 1328 aa16.67■□□□□ 0.26
DDX39A-213ENST00000590315 PRAMEF22A3QJZ6 481 aa16.66■□□□□ 0.26
DDX39A-213ENST00000590315 STARD3NLO95772 234 aa16.66■□□□□ 0.26
DDX39A-213ENST00000590315 ZNF853P0CG23 659 aa16.66■□□□□ 0.26
DDX39A-213ENST00000590315 KRT24Q2M2I5 525 aa16.66■□□□□ 0.26
DDX39A-213ENST00000590315 TEX13AQ9BXU3 409 aaPredicted RBP16.66■□□□□ 0.26
DDX39A-213ENST00000590315 ANO8Q9HCE9 1232 aaPredicted RBP16.66■□□□□ 0.26
DDX39A-213ENST00000590315 ZNF330Q9Y3S2 320 aaPredicted RBP16.66■□□□□ 0.26
DDX39A-213ENST00000590315 ELL2O00472 640 aaPredicted RBP16.65■□□□□ 0.26
DDX39A-213ENST00000590315 GNPATO15228 680 aa16.65■□□□□ 0.26
DDX39A-213ENST00000590315 MSH5O43196 834 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms