RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 PRKAR2BP31323 418 aa16.15■□□□□ 0.18
TPM4-212ENST00000590180 ITPK1Q13572 414 aa16.15■□□□□ 0.18
TPM4-212ENST00000590180 LINC00116Q8NCU8 138 aa16.15■□□□□ 0.18
TPM4-212ENST00000590180 FLAD1Q8NFF5 587 aa16.15■□□□□ 0.18
TPM4-212ENST00000590180 GAS2L2Q8NHY3 880 aa16.15■□□□□ 0.18
TPM4-212ENST00000590180 TOGARAM1Q9Y4F4 1720 aa16.15■□□□□ 0.18
TPM4-212ENST00000590180 LY75O60449 1722 aa16.14■□□□□ 0.17
TPM4-212ENST00000590180 POLD1P28340 1107 aa16.14■□□□□ 0.17
TPM4-212ENST00000590180 ARXQ96QS3 562 aa16.14■□□□□ 0.17
TPM4-212ENST00000590180 PAPPAQ13219 1627 aa16.14■□□□□ 0.17
TPM4-212ENST00000590180 COL3A1P02461 1466 aaPredicted RBP16.14■□□□□ 0.17
TPM4-212ENST00000590180 PHF14O94880 888 aa16.13■□□□□ 0.17
TPM4-212ENST00000590180 RALBP1Q15311 655 aa16.13■□□□□ 0.17
TPM4-212ENST00000590180 SMIM5Q71RC9 77 aa16.13■□□□□ 0.17
TPM4-212ENST00000590180 PHACTR3Q96KR7 559 aa16.13■□□□□ 0.17
TPM4-212ENST00000590180 SLC52A2Q9HAB3 445 aa16.13■□□□□ 0.17
TPM4-212ENST00000590180 GNAT3A8MTJ3 354 aa16.12■□□□□ 0.17
TPM4-212ENST00000590180 FCHSD2O94868 740 aa16.12■□□□□ 0.17
TPM4-212ENST00000590180 SLC4A9Q96Q91 983 aa16.12■□□□□ 0.17
TPM4-212ENST00000590180 RSPH6AQ9H0K4 717 aa16.12■□□□□ 0.17
TPM4-212ENST00000590180 CASZ1Q86V15 1759 aa16.12■□□□□ 0.17
TPM4-212ENST00000590180 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.11■□□□□ 0.17
TPM4-212ENST00000590180 DCAF8L1A6NGE4 600 aa16.11■□□□□ 0.17
TPM4-212ENST00000590180 GNPATO15228 680 aa16.11■□□□□ 0.17
TPM4-212ENST00000590180 SLC39A6Q13433 755 aa16.11■□□□□ 0.17
TPM4-212ENST00000590180 SGIP1Q9BQI5 828 aa16.11■□□□□ 0.17
TPM4-212ENST00000590180 MSL1Q68DK7 614 aa16.1■□□□□ 0.17
TPM4-212ENST00000590180 KLHL34Q8N239 644 aa16.1■□□□□ 0.17
TPM4-212ENST00000590180 IL17REQ8NFR9 667 aa16.1■□□□□ 0.17
TPM4-212ENST00000590180 FHDC1Q9C0D6 1143 aaPredicted RBP16.1■□□□□ 0.17
TPM4-212ENST00000590180 NEFMP07197 916 aa16.09■□□□□ 0.17
TPM4-212ENST00000590180 TEFQ10587 303 aa16.09■□□□□ 0.17
TPM4-212ENST00000590180 AMIGO3Q86WK7 504 aa16.09■□□□□ 0.17
TPM4-212ENST00000590180 TRAPPC3LQ5T215 181 aa16.08■□□□□ 0.16
TPM4-212ENST00000590180 SYT17Q9BSW7 474 aa16.08■□□□□ 0.16
TPM4-212ENST00000590180 RTCBQ9Y3I0 505 aaKnown RBP16.08■□□□□ 0.16
TPM4-212ENST00000590180 SSFA2P28290 1259 aa16.07■□□□□ 0.16
TPM4-212ENST00000590180 RC3H1Q5TC82 1133 aaKnown RBP16.07■□□□□ 0.16
TPM4-212ENST00000590180 RTF1Q92541 710 aaKnown RBP16.07■□□□□ 0.16
TPM4-212ENST00000590180 MAP3K5Q99683 1374 aa16.07■□□□□ 0.16
TPM4-212ENST00000590180 TTC5Q8N0Z6 440 aa16.06■□□□□ 0.16
TPM4-212ENST00000590180 C5P01031 1676 aa16.05■□□□□ 0.16
TPM4-212ENST00000590180 RPS6KA4O75676 772 aa16.05■□□□□ 0.16
TPM4-212ENST00000590180 DNAJC10Q8IXB1 793 aa16.05■□□□□ 0.16
TPM4-212ENST00000590180 PNNQ9H307 717 aaKnown RBP16.05■□□□□ 0.16
TPM4-212ENST00000590180 C4BP0C0L5 1744 aa16.05■□□□□ 0.16
TPM4-212ENST00000590180 CRKLP46109 303 aaKnown RBP16.04■□□□□ 0.16
TPM4-212ENST00000590180 TAF1LQ8IZX4 1826 aa16.03■□□□□ 0.16
TPM4-212ENST00000590180 MYBBP1AQ9BQG0 1328 aaKnown RBP16.03■□□□□ 0.16
TPM4-212ENST00000590180 CNTNAP4Q9C0A0 1308 aa16.03■□□□□ 0.16
TPM4-212ENST00000590180 RFC4P35249 363 aa16.03■□□□□ 0.16
TPM4-212ENST00000590180 MCM10Q7L590 875 aa16.03■□□□□ 0.16
TPM4-212ENST00000590180 ARHGEF1Q92888 912 aaKnown RBP16.03■□□□□ 0.16
TPM4-212ENST00000590180 SCN11AQ9UI33 1791 aa16.03■□□□□ 0.16
TPM4-212ENST00000590180 BTBD11A6QL63 1104 aa16.02■□□□□ 0.16
TPM4-212ENST00000590180 DCTN1Q14203 1278 aa16.02■□□□□ 0.16
TPM4-212ENST00000590180 QSER1Q2KHR3 1735 aa16.02■□□□□ 0.15
TPM4-212ENST00000590180 TUBGCP6Q96RT7 1819 aa16.01■□□□□ 0.15
TPM4-212ENST00000590180 HTATSF1O43719 755 aaKnown RBP16.01■□□□□ 0.15
TPM4-212ENST00000590180 ADRA2BP18089 450 aa16.01■□□□□ 0.15
TPM4-212ENST00000590180 ZNF790Q6PG37 636 aa16.01■□□□□ 0.15
TPM4-212ENST00000590180 MAPK8IP3Q9UPT6 1336 aa16■□□□□ 0.15
TPM4-212ENST00000590180 ZNF316A6NFI3 1004 aaPredicted RBP16■□□□□ 0.15
TPM4-212ENST00000590180 INTS5Q6P9B9 1019 aaKnown RBP16■□□□□ 0.15
TPM4-212ENST00000590180 VSIG10Q8N0Z9 540 aa16■□□□□ 0.15
TPM4-212ENST00000590180 ZNF496Q96IT1 587 aaPredicted RBP16■□□□□ 0.15
TPM4-212ENST00000590180 PLEKHF1Q96S99 279 aa16■□□□□ 0.15
TPM4-212ENST00000590180 CCDC87Q9NVE4 849 aa16■□□□□ 0.15
TPM4-212ENST00000590180 KCNQ3O43525 872 aa15.99■□□□□ 0.15
TPM4-212ENST00000590180 CYP19A1P11511 503 aaPredicted RBP15.99■□□□□ 0.15
TPM4-212ENST00000590180 NLGN1Q8N2Q7 840 aa15.99■□□□□ 0.15
TPM4-212ENST00000590180 PRKRIP1Q9H875 184 aaPredicted RBP15.99■□□□□ 0.15
TPM4-212ENST00000590180 STARD3NLO95772 234 aa15.98■□□□□ 0.15
TPM4-212ENST00000590180 CANXP27824 592 aaKnown RBP15.98■□□□□ 0.15
TPM4-212ENST00000590180 NFE2L2Q16236 605 aa15.98■□□□□ 0.15
TPM4-212ENST00000590180 GPR162Q16538 588 aa15.98■□□□□ 0.15
TPM4-212ENST00000590180 PELP1Q8IZL8 1130 aaKnown RBP15.98■□□□□ 0.15
TPM4-212ENST00000590180 FMNL2Q96PY5 1086 aa15.98■□□□□ 0.15
TPM4-212ENST00000590180 TEX13AQ9BXU3 409 aaPredicted RBP15.98■□□□□ 0.15
TPM4-212ENST00000590180 CEMIPQ8WUJ3 1361 aa15.98■□□□□ 0.15
TPM4-212ENST00000590180 MRC1P22897 1456 aa15.97■□□□□ 0.15
TPM4-212ENST00000590180 MMP10P09238 476 aa15.97■□□□□ 0.15
TPM4-212ENST00000590180 WDR43Q15061 677 aaKnown RBP eCLIP15.97■□□□□ 0.15
TPM4-212ENST00000590180 TAF7Q15545 349 aaPredicted RBP15.97■□□□□ 0.15
TPM4-212ENST00000590180 NLGN2Q8NFZ4 835 aa15.97■□□□□ 0.15
TPM4-212ENST00000590180 UBR3Q6ZT12 1888 aa15.97■□□□□ 0.15
TPM4-212ENST00000590180 ZPR1O75312 459 aa15.96■□□□□ 0.15
TPM4-212ENST00000590180 GYS1P13807 737 aa15.96■□□□□ 0.15
TPM4-212ENST00000590180 MIS18AQ9NYP9 233 aa15.96■□□□□ 0.15
TPM4-212ENST00000590180 SRP68Q9UHB9 627 aaKnown RBP15.96■□□□□ 0.15
TPM4-212ENST00000590180 RIPK4P57078 832 aa15.95■□□□□ 0.14
TPM4-212ENST00000590180 ZBTB1Q9Y2K1 713 aa15.95■□□□□ 0.14
TPM4-212ENST00000590180 CD2APQ9Y5K6 639 aa15.95■□□□□ 0.14
TPM4-212ENST00000590180 HEG1Q9ULI3 1381 aa15.95■□□□□ 0.14
TPM4-212ENST00000590180 CCDC146Q8IYE0 955 aa15.94■□□□□ 0.14
TPM4-212ENST00000590180 PARP3Q9Y6F1 533 aa15.94■□□□□ 0.14
TPM4-212ENST00000590180 ZNF831Q5JPB2 1677 aa15.94■□□□□ 0.14
TPM4-212ENST00000590180 MYH14Q7Z406 1995 aaKnown RBP15.94■□□□□ 0.14
TPM4-212ENST00000590180 SOS1Q07889 1333 aaPredicted RBP15.94■□□□□ 0.14
TPM4-212ENST00000590180 ADAMTS7Q9UKP4 1686 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms