RNA–Protein interactions for RNA: ENST00000590049.5

CAPNS1-209, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5

Gene CAPNS1, Length 592 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-209ENST00000590049 POTEJP0CG39 1038 aa16.53■□□□□ 0.24
CAPNS1-209ENST00000590049 RASSF7Q02833 373 aa16.53■□□□□ 0.24
CAPNS1-209ENST00000590049 NBPF15Q8N660 670 aa16.51■□□□□ 0.23
CAPNS1-209ENST00000590049 TSKSQ9UJT2 592 aa16.51■□□□□ 0.23
CAPNS1-209ENST00000590049 CUL9Q8IWT3 2517 aa16.51■□□□□ 0.23
CAPNS1-209ENST00000590049 PALLDQ8WX93 1383 aa16.51■□□□□ 0.23
CAPNS1-209ENST00000590049 NLGN1Q8N2Q7 840 aa16.48■□□□□ 0.23
CAPNS1-209ENST00000590049 LDHDQ86WU2 507 aa16.47■□□□□ 0.23
CAPNS1-209ENST00000590049 NFAT5O94916 1531 aa16.46■□□□□ 0.23
CAPNS1-209ENST00000590049 THSD7BQ9C0I4 1608 aa16.46■□□□□ 0.23
CAPNS1-209ENST00000590049 TIAM2Q8IVF5 1701 aa16.46■□□□□ 0.23
CAPNS1-209ENST00000590049 ITGBL1O95965 494 aaPredicted RBP16.46■□□□□ 0.23
CAPNS1-209ENST00000590049 FXR1P51114 621 aaKnown RBP eCLIP16.46■□□□□ 0.23
CAPNS1-209ENST00000590049 CA12O43570 354 aa16.45■□□□□ 0.22
CAPNS1-209ENST00000590049 ZEB1P37275 1124 aaPredicted RBP16.45■□□□□ 0.22
CAPNS1-209ENST00000590049 TMF1P82094 1093 aa16.45■□□□□ 0.22
CAPNS1-209ENST00000590049 ANKRD24Q8TF21 1146 aa16.45■□□□□ 0.22
CAPNS1-209ENST00000590049 ABT1Q9ULW3 272 aaKnown RBP16.45■□□□□ 0.22
CAPNS1-209ENST00000590049 PARP3Q9Y6F1 533 aa16.45■□□□□ 0.22
CAPNS1-209ENST00000590049 SLC17A8Q8NDX2 589 aa16.44■□□□□ 0.22
CAPNS1-209ENST00000590049 GPR101Q96P66 508 aaPredicted RBP16.44■□□□□ 0.22
CAPNS1-209ENST00000590049 PITPNM2Q9BZ72 1349 aa16.44■□□□□ 0.22
CAPNS1-209ENST00000590049 C4AP0C0L4 1744 aa16.43■□□□□ 0.22
CAPNS1-209ENST00000590049 GNPATO15228 680 aa16.43■□□□□ 0.22
CAPNS1-209ENST00000590049 ECE1P42892 770 aa16.43■□□□□ 0.22
CAPNS1-209ENST00000590049 LTBP1Q14766 1721 aa16.42■□□□□ 0.22
CAPNS1-209ENST00000590049 CASP8AP2Q9UKL3 1982 aa16.42■□□□□ 0.22
CAPNS1-209ENST00000590049 SRPK2P78362 688 aaKnown RBP16.42■□□□□ 0.22
CAPNS1-209ENST00000590049 ZCRB1Q8TBF4 217 aaKnown RBP16.42■□□□□ 0.22
CAPNS1-209ENST00000590049 CAPNS2Q96L46 248 aa16.42■□□□□ 0.22
CAPNS1-209ENST00000590049 NEUROD1Q13562 356 aa16.41■□□□□ 0.22
CAPNS1-209ENST00000590049 PAXIP1Q6ZW49 1069 aaPredicted RBP16.41■□□□□ 0.22
CAPNS1-209ENST00000590049 SMARCC1Q92922 1105 aaPredicted RBP16.41■□□□□ 0.22
CAPNS1-209ENST00000590049 CHRNA5P30532 468 aa16.4■□□□□ 0.22
CAPNS1-209ENST00000590049 A0A0C4DFX4 3053 aa16.39■□□□□ 0.22
CAPNS1-209ENST00000590049 LINC00116Q8NCU8 138 aa16.39■□□□□ 0.21
CAPNS1-209ENST00000590049 CABP1Q9NZU7 370 aa16.39■□□□□ 0.21
CAPNS1-209ENST00000590049 IQCA1LA6NCM1 817 aa16.38■□□□□ 0.21
CAPNS1-209ENST00000590049 GRM1Q13255 1194 aa16.38■□□□□ 0.21
CAPNS1-209ENST00000590049 MAP2K2P36507 400 aa16.37■□□□□ 0.21
CAPNS1-209ENST00000590049 MPRIPQ6WCQ1 1025 aa16.37■□□□□ 0.21
CAPNS1-209ENST00000590049 SIN3AQ96ST3 1273 aa16.37■□□□□ 0.21
CAPNS1-209ENST00000590049 TTC21BQ7Z4L5 1316 aa16.37■□□□□ 0.21
CAPNS1-209ENST00000590049 TONSLQ96HA7 1378 aa16.36■□□□□ 0.21
CAPNS1-209ENST00000590049 ERFEQ4G0M1 354 aa16.35■□□□□ 0.21
CAPNS1-209ENST00000590049 TRAPPC3LQ5T215 181 aa16.35■□□□□ 0.21
CAPNS1-209ENST00000590049 CYP4F22Q6NT55 531 aa16.35■□□□□ 0.21
CAPNS1-209ENST00000590049 CABP2Q9NPB3 220 aa16.35■□□□□ 0.21
CAPNS1-209ENST00000590049 DDNO94850 711 aaPredicted RBP16.34■□□□□ 0.21
CAPNS1-209ENST00000590049 GYS1P13807 737 aa16.34■□□□□ 0.21
CAPNS1-209ENST00000590049 TAF1DQ9H5J8 278 aaPredicted RBP16.34■□□□□ 0.21
CAPNS1-209ENST00000590049 TTC21AQ8NDW8 1320 aa16.34■□□□□ 0.21
CAPNS1-209ENST00000590049 ADAMTS7Q9UKP4 1686 aa16.34■□□□□ 0.21
CAPNS1-209ENST00000590049 NFKBIEO00221 500 aa16.33■□□□□ 0.2
CAPNS1-209ENST00000590049 CLEC11AQ9Y240 323 aa16.33■□□□□ 0.2
CAPNS1-209ENST00000590049 LOC102724428A0A0B4J2F2 783 aa16.32■□□□□ 0.2
CAPNS1-209ENST00000590049 SIK1P57059 783 aa16.32■□□□□ 0.2
CAPNS1-209ENST00000590049 NBPF1Q3BBV0 1214 aa16.32■□□□□ 0.2
CAPNS1-209ENST00000590049 CCDC88AQ3V6T2 1871 aa16.32■□□□□ 0.2
CAPNS1-209ENST00000590049 EAPPQ56P03 285 aaPredicted RBP16.32■□□□□ 0.2
CAPNS1-209ENST00000590049 CNTROBQ8N137 903 aa16.32■□□□□ 0.2
CAPNS1-209ENST00000590049 TIMELESSQ9UNS1 1208 aa16.32■□□□□ 0.2
CAPNS1-209ENST00000590049 AOC2O75106 756 aa16.31■□□□□ 0.2
CAPNS1-209ENST00000590049 RTCBQ9Y3I0 505 aaKnown RBP16.31■□□□□ 0.2
CAPNS1-209ENST00000590049 BRPF1P55201 1214 aaPredicted RBP16.29■□□□□ 0.2
CAPNS1-209ENST00000590049 L3MBTL3Q96JM7 780 aaPredicted RBP16.29■□□□□ 0.2
CAPNS1-209ENST00000590049 ZNF692Q9BU19 519 aaPredicted RBP16.29■□□□□ 0.2
CAPNS1-209ENST00000590049 ADRA2BP18089 450 aa16.28■□□□□ 0.2
CAPNS1-209ENST00000590049 RFC4P35249 363 aa16.28■□□□□ 0.2
CAPNS1-209ENST00000590049 ITPK1Q13572 414 aa16.28■□□□□ 0.2
CAPNS1-209ENST00000590049 ARHGEF1Q92888 912 aaKnown RBP16.28■□□□□ 0.2
CAPNS1-209ENST00000590049 DDX21Q9NR30 783 aaKnown RBP eCLIP16.28■□□□□ 0.2
CAPNS1-209ENST00000590049 MEGF6O75095 1541 aa16.28■□□□□ 0.2
CAPNS1-209ENST00000590049 FAM208AQ9UK61 1670 aaKnown RBP16.27■□□□□ 0.2
CAPNS1-209ENST00000590049 SCN4AP35499 1836 aa16.27■□□□□ 0.2
CAPNS1-209ENST00000590049 MAP1SQ66K74 1059 aaPredicted RBP16.27■□□□□ 0.2
CAPNS1-209ENST00000590049 LTV1Q96GA3 475 aaPredicted RBP16.27■□□□□ 0.2
CAPNS1-209ENST00000590049 LTN1O94822 1766 aa16.26■□□□□ 0.19
CAPNS1-209ENST00000590049 TTLL6Q8N841 843 aa16.26■□□□□ 0.19
CAPNS1-209ENST00000590049 MAP2P11137 1827 aaKnown RBP16.25■□□□□ 0.19
CAPNS1-209ENST00000590049 ATP6V1AP38606 617 aa16.25■□□□□ 0.19
CAPNS1-209ENST00000590049 CGNL1Q0VF96 1302 aa16.24■□□□□ 0.19
CAPNS1-209ENST00000590049 SZT2Q5T011 3432 aa16.24■□□□□ 0.19
CAPNS1-209ENST00000590049 PNMA8AQ86V59 439 aaPredicted RBP16.24■□□□□ 0.19
CAPNS1-209ENST00000590049 KDM2AQ9Y2K7 1162 aa16.24■□□□□ 0.19
CAPNS1-209ENST00000590049 DICER1Q9UPY3 1922 aaKnown RBP16.23■□□□□ 0.19
CAPNS1-209ENST00000590049 MNX1P50219 401 aaPredicted RBP16.23■□□□□ 0.19
CAPNS1-209ENST00000590049 DDR1Q08345 913 aa16.23■□□□□ 0.19
CAPNS1-209ENST00000590049 PIGBQ92521 554 aa16.23■□□□□ 0.19
CAPNS1-209ENST00000590049 HACL1Q9UJ83 578 aa16.23■□□□□ 0.19
CAPNS1-209ENST00000590049 ADAMTSL1Q8N6G6 1762 aa16.23■□□□□ 0.19
CAPNS1-209ENST00000590049 TLL2Q9Y6L7 1015 aa16.22■□□□□ 0.19
CAPNS1-209ENST00000590049 PCDH11XQ9BZA7 1347 aa16.21■□□□□ 0.19
CAPNS1-209ENST00000590049 PCDH11YQ9BZA8 1340 aa16.21■□□□□ 0.19
CAPNS1-209ENST00000590049 EPHX2P34913 555 aa16.21■□□□□ 0.19
CAPNS1-209ENST00000590049 CIAPIN1Q6FI81 312 aa16.21■□□□□ 0.19
CAPNS1-209ENST00000590049 IP6K1Q92551 441 aa16.21■□□□□ 0.19
CAPNS1-209ENST00000590049 L3MBTL2Q969R5 705 aa16.21■□□□□ 0.19
CAPNS1-209ENST00000590049 USP31Q70CQ4 1352 aa16.21■□□□□ 0.19
CAPNS1-209ENST00000590049 HPS5Q9UPZ3 1129 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms